Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0591800-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:22885246:22888099:-1 gene:Os02g0591800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brix domain containing protein. (Os02t0591800-01);Brix domain containing protein. (Os02t0591800-02)
Sequence

ATGGCGAAGAAGCGGAAGCGCTCCTCCGATGCGGCGGCCGCGGTGGAGAAGCCCGACGAG
TTCGCGCCGCAGCGCCCGGAGCGCACCCTCTTCGGCTTCAAGGAGAAGCCCGCGGACGAC
GAGGAAGCCGAGGCCGAGGCCGCCTCTGAGGGAGAAGAGGATGCCGCCGCCGCCGCCGCC
GCGGCGCCGTTCCGCAACAAGGAGAAGGTGCTCGTGACCTGCTCCCGCCGAATCAACTAC
CGGTATCGGCATCTGATGCAGAACGTGGTGTCGCTGCTGCCGCACGCCAAGAAGGACAGC
AAGGTCGAGTCGAAGCAGAGCAAGGGCAATGCGCTCAACGAGCTGCTCGAGCTCAGGAAC
TGCTCCAGCTGCCTCTTCTTCGAGTGCAGAAAACAGAAGGATCTTTACCTTTGGATGGTT
AAGTCCCCTGGAGGACCATCAGTGAAATTTCTAGTTAATGCTGTTCACACCATGGAGGAG
TTGAAGCTTACAGGGAACCATCTGAAAGGGTCACGGCCTCTTATAACATTTTCTACAAAT
TTTGATGAACAACCTCACTGGCAGCTTGTGAAAGAAATGCTAACCCAGATATTTGCTACT
CCAAAAGATCATCGAAAGGCAAAGCCTTTTCATGACCATGTGTTTGTCTTCTCTATCGTT
GATGACCATGTTTGGTTTAGAAATTATCAGATTTCTGTTCCCCACAATGAGATTGACAAG
GTTGATAAAGGAGGTCTGGACAAGATGACACTTGTTGAGGTTGGCCCAAGGTTCTGTTTG
AACCCAATCAAAATATTTGGCGGTAGTTTCGGTGGCCCTACATTGTACGAGAATCCATTC
TATGTGTCTCCCAATCAGATCCGTGCACTAGAGAAGCGGAAGAAGGCCGGCAAGTATGCC
AAGAAGGTCAAGGCTAAGGTGAGGAGGAAGATGCACGAGATGGAGAACACTCTGGAGCCT
GATGAATTTGCTGAACTTTGGAAAGGGGAGGACTAG

Peptide Sequence

PEP ID

Os02t0591800-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:22885246:22888099:-1 gene:Os02g0591800 transcript:Os02t0591800-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brix domain containing protein. (Os02t0591800-01);Brix domain containing protein. (Os02t0591800-02)
Sequence

MAKKRKRSSDAAAAVEKPDEFAPQRPERTLFGFKEKPADDEEAEAEAASEGEEDAAAAAA
AAPFRNKEKVLVTCSRRINYRYRHLMQNVVSLLPHAKKDSKVESKQSKGNALNELLELRN
CSSCLFFECRKQKDLYLWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLITFSTN
FDEQPHWQLVKEMLTQIFATPKDHRKAKPFHDHVFVFSIVDDHVWFRNYQISVPHNEIDK
VDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKRKKAGKYA
KKVKAKVRRKMHEMENTLEPDEFAELWKGED

Transcript Sequence

Transcript ID

Os02t0591800-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22885246:22888099:-1 gene:Os02g0591800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Brix domain containing protein. (Os02t0591800-01);Brix domain containing protein. (Os02t0591800-02)
Sequence

GCCGCCGCCGAAGCAGCTGCGACCGCCGCCGCCGCGATTCGAGCCCCAGCCATGGCGAAG
AAGCGGAAGCGCTCCTCCGATGCGGCGGCCGCGGTGGAGAAGCCCGACGAGTTCGCGCCG
CAGCGCCCGGAGCGCACCCTCTTCGGCTTCAAGGAGAAGCCCGCGGACGACGAGGAAGCC
GAGGCCGAGGCCGCCTCTGAGGGAGAAGAGGATGCCGCCGCCGCCGCCGCCGCGGCGCCG
TTCCGCAACAAGGAGAAGGTGCTCGTGACCTGCTCCCGCCGAATCAACTACCGGTATCGG
CATCTGATGCAGAACGTGGTGTCGCTGCTGCCGCACGCCAAGAAGGACAGCAAGGTCGAG
TCGAAGCAGAGCAAGGGCAATGCGCTCAACGAGCTGCTCGAGCTCAGGAACTGCTCCAGC
TGCCTCTTCTTCGAGTGCAGAAAACAGAAGGATCTTTACCTTTGGATGGTTAAGTCCCCT
GGAGGACCATCAGTGAAATTTCTAGTTAATGCTGTTCACACCATGGAGGAGTTGAAGCTT
ACAGGGAACCATCTGAAAGGGTCACGGCCTCTTATAACATTTTCTACAAATTTTGATGAA
CAACCTCACTGGCAGCTTGTGAAAGAAATGCTAACCCAGATATTTGCTACTCCAAAAGAT
CATCGAAAGGCAAAGCCTTTTCATGACCATGTGTTTGTCTTCTCTATCGTTGATGACCAT
GTTTGGTTTAGAAATTATCAGATTTCTGTTCCCCACAATGAGATTGACAAGGTTGATAAA
GGAGGTCTGGACAAGATGACACTTGTTGAGGTTGGCCCAAGGTTCTGTTTGAACCCAATC
AAAATATTTGGCGGTAGTTTCGGTGGCCCTACATTGTACGAGAATCCATTCTATGTGTCT
CCCAATCAGATCCGTGCACTAGAGAAGCGGAAGAAGGCCGGCAAGTATGCCAAGAAGGTC
AAGGCTAAGGTGAGGAGGAAGATGCACGAGATGGAGAACACTCTGGAGCCTGATGAATTT
GCTGAACTTTGGAAAGGGGAGGACTAGTTCAGCTATAGTGATTGAACCATCAACCCCCGT
TAAACTAGTTGCTCTCGCTGTCACCCGACACGAGTTTTGTTTACTATATCTCGTGGAATT
TCTTGTATGACACCATGAGTCTATTATTTACATGAATAAGATTTTAGTGTCCTATCCT