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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0586500-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:22602418:22605737:-1 gene:Os02g0586500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.5 protein. (Os02t0586500-01);Similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen). (Os02t0586500-02)
Sequence

ATGAAGCTCGTCAGGTTCTTGATGAAGCTGAACAACGAGACGGTAACGATCGAGCTCAAG
AACGGCACCACCGTCCATGGCACCATCACTGGTGTTGATATCAGCATGAACACGCACCTG
AAAACTGTGAAACTCACATTGAAAGGGAAAAATCCTGTTACCTTTGATCACCTCAGTGTG
AGGGGAAACAACATTCGCTATTACATTCTTCCTGACAGCTTAAACCTGGAGACATTGCTG
GTTGAGGATACACCGAGGGTCAAGGCTAAGAAGCCAACTGCAGGGAAGCCTTTGGGGCGT
GGGCGCGGCCGTGGTCGTGGGCGCGGTCGTGGCAGGGGACGCTGA

Peptide Sequence

PEP ID

Os02t0586500-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:22602418:22605737:-1 gene:Os02g0586500 transcript:Os02t0586500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.5 protein. (Os02t0586500-01);Similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen). (Os02t0586500-02)
Sequence

MKLVRFLMKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSV
RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGRGRGRGRGRGRGR

Transcript Sequence

Transcript ID

Os02t0586500-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22602418:22605737:-1 gene:Os02g0586500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0124N08.5 protein. (Os02t0586500-01);Similar to Small nuclear ribonucleoprotein Sm D1 (snRNP core protein D1) (Sm-D1) (Sm-D autoantigen). (Os02t0586500-02)
Sequence

GAGGAGGCAGCTCCCCCCCAAAAACCCTAGCTCAGGCTTCGGCACCGCCTCTCCCCCCCT
CGCCTTCCTCCCCCCACCAGGCGCCTCCAAGATGAAGCTCGTCAGGTTCTTGATGAAGCT
GAACAACGAGACGGTAACGATCGAGCTCAAGAACGGCACCACCGTCCATGGCACCATCAC
TGGTGTTGATATCAGCATGAACACGCACCTGAAAACTGTGAAACTCACATTGAAAGGGAA
AAATCCTGTTACCTTTGATCACCTCAGTGTGAGGGGAAACAACATTCGCTATTACATTCT
TCCTGACAGCTTAAACCTGGAGACATTGCTGGTTGAGGATACACCGAGGGTCAAGGCTAA
GAAGCCAACTGCAGGGAAGCCTTTGGGGCGTGGGCGCGGCCGTGGTCGTGGGCGCGGTCG
TGGCAGGGGACGCTGAGCTTCACTCCAGTTCCCTATCTTGGAAACTTTTGCATCCGTGCA
AATGTAATCTCTGCTCTCGTGTTAGCTTGTACGGAGTAGTGTTCTGATTATGGCAAAGAC
GTTGATGTAAGCACTCGGCACCTCTTTATCGATGTGGATTTTTTCCCGGTTGGTATTTGA
CCAGATGTTCTTGTTCAAGAATATGCTACGTTACATTGT