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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0582600-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:22468206:22469684:-1 gene:Os02g0582600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-01);Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-02)
Sequence

ATGAAGAAGGAGATCATTATCAGGATTTCCGTGAAAACCGACAAATGCCAGAAGAAGGCC
ATGAAAGAGGCTGCTACTGTCAGCGGGGTGCAGTCGGTGACGCTGGCCGGCGGCGACCGG
AACCTGCTGCTGGTGATCGGCGAGGGCGTGGACACGAACAAGCTGACCAAGAAGCTCAAG
AGGAAGGTGGGCTCCGGTGAGATCGTCGAGCTGAGGACCGTCGACACGTTCGAGGCGGCG
GCGGCGATGTTCCCGGGCGGGATGATCATGCCGCCGCCGGCGCCGGGGAGCAAGGACGCC
GCCGCCGCCAGGGCGATGGCGACGACGCGGGCGTCGCCGTACCACTACCAGCCGTCGCCG
TACGGCCCGTACCACCAGCAGCAGCAGTGGCAGCCGCCGTACGCCATGGCGCCCAGCCCG
TACGCGTACCCGTACCAGTACCACCCGTCGCCGATGGCGATGGCCGCCGGCGGCGGCGGC
TACGGCTACGGCGGCAGCAGCTACTCCCGCGCGGTGGCGCTCAGCCACCCGGCCATCTAC
TCGCCGCTGGTGGAGAAGCACGACTACCACCCCATGAACCACTCCACCACCACCAAGAAG
AAGACCACCACCACCACCACCACCACCGGCGCCGGCACCGGCCGCGCCGCCGCCGCAGCC
GCCGGCGGCAAGACCTTCAAGGCGGTGTCCCGCTCCCGCCGCCACCACGAGAGCGACAGC
AACGCCTGCTGCATTCTCTAG

Peptide Sequence

PEP ID

Os02t0582600-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:22468206:22469684:-1 gene:Os02g0582600 transcript:Os02t0582600-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-01);Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-02)
Sequence

MKKEIIIRISVKTDKCQKKAMKEAATVSGVQSVTLAGGDRNLLLVIGEGVDTNKLTKKLK
RKVGSGEIVELRTVDTFEAAAAMFPGGMIMPPPAPGSKDAAAARAMATTRASPYHYQPSP
YGPYHQQQQWQPPYAMAPSPYAYPYQYHPSPMAMAAGGGGYGYGGSSYSRAVALSHPAIY
SPLVEKHDYHPMNHSTTTKKKTTTTTTTTGAGTGRAAAAAAGGKTFKAVSRSRRHHESDS
NACCIL

Transcript Sequence

Transcript ID

Os02t0582600-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22468206:22469684:-1 gene:Os02g0582600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-01);Heavy metal transport/detoxification protein domain containing protein. (Os02t0582600-02)
Sequence

GCTAATCTCCTTAGCCCTCTCCTCCATTGGAGCTATAGCTAGCAAACTTTTTTTTTTTAC
TGAGCAAATTCAGTTAGCGAAGCGAAAACCATGAAGAAGGAGATCATTATCAGGATTTCC
GTGAAAACCGACAAATGCCAGAAGAAGGCCATGAAAGAGGCTGCTACTGTCAGCGGGGTG
CAGTCGGTGACGCTGGCCGGCGGCGACCGGAACCTGCTGCTGGTGATCGGCGAGGGCGTG
GACACGAACAAGCTGACCAAGAAGCTCAAGAGGAAGGTGGGCTCCGGTGAGATCGTCGAG
CTGAGGACCGTCGACACGTTCGAGGCGGCGGCGGCGATGTTCCCGGGCGGGATGATCATG
CCGCCGCCGGCGCCGGGGAGCAAGGACGCCGCCGCCGCCAGGGCGATGGCGACGACGCGG
GCGTCGCCGTACCACTACCAGCCGTCGCCGTACGGCCCGTACCACCAGCAGCAGCAGTGG
CAGCCGCCGTACGCCATGGCGCCCAGCCCGTACGCGTACCCGTACCAGTACCACCCGTCG
CCGATGGCGATGGCCGCCGGCGGCGGCGGCTACGGCTACGGCGGCAGCAGCTACTCCCGC
GCGGTGGCGCTCAGCCACCCGGCCATCTACTCGCCGCTGGTGGAGAAGCACGACTACCAC
CCCATGAACCACTCCACCACCACCAAGAAGAAGACCACCACCACCACCACCACCACCGGC
GCCGGCACCGGCCGCGCCGCCGCCGCAGCCGCCGGCGGCAAGACCTTCAAGGCGGTGTCC
CGCTCCCGCCGCCACCACGAGAGCGACAGCAACGCCTGCTGCATTCTCTAGCACCAAATT
AATCTCGATCCATAAAATTACCTATATATGTGCATGCATGTACATATGTGTGATTTTGCT
TGTTGCTTTCTTGCCTTGTTCTTTTCCATTTTTGAAGGTCGTTAACCTTTTGCTGCTTTC
TTTTGCGGTTAATTAATTTGGCAGCTTTTGCTGCACAACCTAGTGAATTAACCATGTATA
ATAATAAAACTGTATATCGTAAAAACTGTACCTGTAAAACTCTGTTACTGCTTGGATTTC
TTCAGAGATTATCTGAAGTTCTTGCAAG