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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0582400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22459494:22462753:-1 gene:Os02g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0582400-01);Conserved hypothetical protein. (Os02t0582400-02)
Sequence

ATGCGGGTGGCACCCAAGGTCCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCC
CTCGCCGACGCGCTCCGCCCAACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTC
CCCCTCGCCAAGTACGGCCTCGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCC
GATTCTAGTGGCGATCCGCAGGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTT
GCAGCATGTGCTATGAATGAGATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAG
CCAACCCTCATTGTCCCATTTATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACA
GGACAGTTAGCTACACTCCATGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATG
TTAGTTGACGGAACTACTAAACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTC
TGTTTGCTGGAAATGGTACGTGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGT
GGGCAGCACCAAGGAAAAAGCTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGT
GATCACTTGGCTAAGCACATCAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGG
ATCGAAAAATCACCCGTCTTTCAGGAACCATGGCGCGAACTGTACCAGTGA

Peptide Sequence

PEP ID

Os02t0582400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22459494:22462753:-1 gene:Os02g0582400 transcript:Os02t0582400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0582400-01);Conserved hypothetical protein. (Os02t0582400-02)
Sequence

MRVAPKVLVLVRDAAGYGAALADALRPTPGLTRESTPLELPLAKYGLDGEKASGELVNFS
DSSGDPQVSFFVLPDYKPPVAACAMNEILALVSSEAPSTQPTLIVPFMTRSPNYYHGAKT
GQLATLHGAEIGATTEFTQMLVDGTTKLPQSLQVRSEPILCLLEMVRVLNIPTVILFASG
GQHQGKSSTDVDLEVLQCVGDHLAKHINLEFSKETVLQRGIEKSPVFQEPWRELYQ

Transcript Sequence

Transcript ID

Os02t0582400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22459494:22462753:-1 gene:Os02g0582400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0582400-01);Conserved hypothetical protein. (Os02t0582400-02)
Sequence

ATCTCTGGCTCTTCGCGTGCTCAACCGCTAATTCCCTCCCCTCTCCTCTCTCCCTCCGAT
CATTCGCGGCGGCGGCGGCGGCGACCGGCGACCGGCGGCCATGCGGGTGGCACCCAAGGT
CCTCGTCCTCGTCCGCGACGCCGCCGGCTACGGCGCCGCCCTCGCCGACGCGCTCCGCCC
AACGCCGGGGCTCACGAGGGAATCCACGCCCCTGGAGCTCCCCCTCGCCAAGTACGGCCT
CGACGGGGAGAAGGCCTCCGGCGAGCTCGTGAACTTCTCCGATTCTAGTGGCGATCCGCA
GGTGTCCTTTTTTGTCCTACCAGACTATAAGCCTCCTGTTGCAGCATGTGCTATGAATGA
GATTTTAGCATTGGTTTCTTCGGAAGCTCCATCCACTCAGCCAACCCTCATTGTCCCATT
TATGACAAGATCGCCAAACTATTATCATGGAGCAAAAACAGGACAGTTAGCTACACTCCA
TGGTGCTGAAATAGGAGCAACAACTGAGTTTACTCAGATGTTAGTTGACGGAACTACTAA
ACTTCCTCAATCTTTACAAGTGCGAAGTGAGCCAATACTCTGTTTGCTGGAAATGGTACG
TGTGTTGAATATACCGACAGTTATTCTTTTTGCATCCGGTGGGCAGCACCAAGGAAAAAG
CTCTACAGATGTGGACCTTGAGGTGCTGCAGTGTGTAGGTGATCACTTGGCTAAGCACAT
CAACTTGGAATTCAGCAAAGAAACCGTTCTTCAGAGGGGGATCGAAAAATCACCCGTCTT
TCAGGAACCATGGCGCGAACTGTACCAGTGACAGAATTCTGGCATGCCAGCACCCTCTGA
ATTTAGTTTTGTAGGCCTTACATGTTGGACTAGTACGGTGTACCGGAATGCTGGATTTAT
TCTGTCAAAGGGTGTGTAATATGACGCTCTGTTTGCTTCTGTTTACTTCCATCTTGATCA
ACTGCTTCTCATTCCTTGCTGCCACTCTAGAGCAAAGCTCCTATAAAATTATAGAAGAAA
CCGCTGGACTGGTCAATCTGGTCTTCTGGC