Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0582300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:22452697:22457747:-1 gene:Os02g0582300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0582300-01)
Sequence	ATGCGGGCGACGCCACCGCCGCCGCCGCGTCCCCCGGCTCGCGCGTACCCAGGAACGTCT CCCATGGGCTCGTCTCCAGCCTTGCCGCGCTCCACCAACCCGGCGGCGCTCCTCGCCCAC CTCGCCGCCGTCCTCACCTCGCCCGACTGGTTCCTCAACCCTTCCCTGCCCCGCCTCCCT GCCCTGCTCACGCCGTCCCTGCCGGAGTCGCTCCCCGTCCCGCTCCCCGTCCGCCTCGCC GCCGCGGCGGCCAGGGTGGCCGCGCCGTCCCGCCACCTCCTCGCCGTCGCGCTCCCGGTC GTCCTCCGCCTCCACTCCCTCTCGCCCCCGCCGCTCCGCCCGCTCTTCGACCGCCCCTTC GCCTCCCTCCTCGCCCACCTCTCCCGCTTCGCCCTCGCGCCGCTCGCCCTCCGCCTCTTC GCCCACATGCACCGCCACGCCCCGCCGGCGCCGACAGCCCCCACCTACAACGCCGTCATC CGCTCCCTCTGCCGCCGCGCCGACCTCGCCCGCGCCCTGCGGTACCTCAGCCTCATGGTC CGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTCGGGTATTGCCGC ACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAGAGGGTTCGCC CAGGACGTGGTCTCTTACGCCACGCTGATTGAGGGGCTTTGTGAGGCGGGGAGGATTGAC GAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTATGCAGCCTTA GTGAAGGGGTTGTGTAATGCGGAGCGGGGGGAGGAGGGGCTTCTCATGCTGCGTAGGATG AAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGATTTCCGGTGT AGGGAGCGTAAGGCCAAGGAGGCTGAGGAAATGCTTCAGGAGATGTTTGAAAAGGGATTG GCACCGTGTGTTGTGACATGCACTGCGGTGATAAATGCATATTGTAAGGAGGGAAGGATG AGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCCAAATGTGTGG ACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAAGGCGATGACT TTGTTGAACAAGATGAGAGCATGTGGAGTCAACCCAGATGCTGTGACATATAATTTGTTG ATTCGGGGCCAATGCATTGATGGACATATAGAGAGTGCTTTCCGATTGCTACGTTTGATG GAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATCAATGCTCTCTGC AAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAACTAGAGGCATA AAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTCTGGTAAAGCT GATATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACCCGATACTTAC ACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGAAGGTCTGTCC TTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTATACAATTGTG ATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTGGGGCGAAATG GTTTCATCAGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCGTGCTTACTGC ATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAAAAATGGGGTC ACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTATTGGACAGACA GATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCCAAACCAGTTT ACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGATGTGTTGCCT TTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGGGTTGTTTGAT GTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCATTCTAGAGGGG TTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTATGAAAGAAGAT AGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTGCAAATCCAAA AGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTTTATACCACAG TTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAACAGATAAGGCT AAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGATTGTGTGGAAA GTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGAAATGATTATC ATGTTAGAGCGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCTGACTGAGGAA TTACCTGACAGGGAATAA

Peptide Sequence

PEP ID	Os02t0582300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:22452697:22457747:-1 gene:Os02g0582300 transcript:Os02t0582300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0582300-01)
Sequence	MRATPPPPPRPPARAYPGTSPMGSSPALPRSTNPAALLAHLAAVLTSPDWFLNPSLPRLP ALLTPSLPESLPVPLPVRLAAAAARVAAPSRHLLAVALPVVLRLHSLSPPPLRPLFDRPF ASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMV RSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRID EAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRC RERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVW TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE LPDRE

Transcript Sequence

Transcript ID	Os02t0582300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:22452697:22457747:-1 gene:Os02g0582300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0582300-01)
Sequence	GGTGGTGTTCCTTGCGCAAATCTCGAAGCAGGGGCAGCGTCAAGCCGTCAACCCGGCTCC TGGCAAAGGAGCAGAGCCGAGATCCCCCAGCAATGGCGGCGGCGCAGTGAGCTCGCCGCC GATTGCCAACATGCGGGCGACGCCACCGCCGCCGCCGCGTCCCCCGGCTCGCGCGTACCC AGGAACGTCTCCCATGGGCTCGTCTCCAGCCTTGCCGCGCTCCACCAACCCGGCGGCGCT CCTCGCCCACCTCGCCGCCGTCCTCACCTCGCCCGACTGGTTCCTCAACCCTTCCCTGCC CCGCCTCCCTGCCCTGCTCACGCCGTCCCTGCCGGAGTCGCTCCCCGTCCCGCTCCCCGT CCGCCTCGCCGCCGCGGCGGCCAGGGTGGCCGCGCCGTCCCGCCACCTCCTCGCCGTCGC GCTCCCGGTCGTCCTCCGCCTCCACTCCCTCTCGCCCCCGCCGCTCCGCCCGCTCTTCGA CCGCCCCTTCGCCTCCCTCCTCGCCCACCTCTCCCGCTTCGCCCTCGCGCCGCTCGCCCT CCGCCTCTTCGCCCACATGCACCGCCACGCCCCGCCGGCGCCGACAGCCCCCACCTACAA CGCCGTCATCCGCTCCCTCTGCCGCCGCGCCGACCTCGCCCGCGCCCTGCGGTACCTCAG CCTCATGGTCCGCTCCGGCTGGCGCCCCGACGCCTACACGTTCAACTCCCTCATCGTCGG GTATTGCCGCACCAACCAGGTCGACGTTGCCCGCGACCTGTTCGACAAAATGCCCCTGAG AGGGTTCGCCCAGGACGTGGTCTCTTACGCCACGCTGATTGAGGGGCTTTGTGAGGCGGG GAGGATTGACGAGGCAGTGGAGTTGTTCGGGGAGATGGACCAGCCAGACATGCACATGTA TGCAGCCTTAGTGAAGGGGTTGTGTAATGCGGAGCGGGGGGAGGAGGGGCTTCTCATGCT GCGTAGGATGAAGGAATTGGGGTGGCGGCCAAGCACCCGTGCTTATGCAGCTGTGGTTGA TTTCCGGTGTAGGGAGCGTAAGGCCAAGGAGGCTGAGGAAATGCTTCAGGAGATGTTTGA AAAGGGATTGGCACCGTGTGTTGTGACATGCACTGCGGTGATAAATGCATATTGTAAGGA GGGAAGGATGAGCGATGCATTGAGGGTGTTGGAGTTGATGAAGTTGAGGGGGTGCAAGCC AAATGTGTGGACATATAATGCATTGGTCCAAGGGTTCTGTAATGAAGGAAAGGTGCACAA GGCGATGACTTTGTTGAACAAGATGAGAGCATGTGGAGTCAACCCAGATGCTGTGACATA TAATTTGTTGATTCGGGGCCAATGCATTGATGGACATATAGAGAGTGCTTTCCGATTGCT ACGTTTGATGGAAGGAGATGGTTTAATTGCTGATCAGTACACATATAATGCGTTGATCAA TGCTCTCTGCAAGGATGGAAGAACTGATCAAGCTTGCTCCCTTTTTGATAGTCTAGAAAC TAGAGGCATAAAACCTAATGCCGTGACATTCAATTCCTTGATAAATGGGTTATGCAAGTC TGGTAAAGCTGATATTGCATGGAAATTTTTGGAAAAGATGGTTTCTGCAGGTTGCACACC CGATACTTACACATACAGTTCATTTATTGAACACCTATGCAAGATGAAGGGGTCACAAGA AGGTCTGTCCTTTATAGGGGAGATGCTACAAAAGGATGTGAAGCCCTCAACAGTCAATTA TACAATTGTGATTCATAAGCTTTTAAAGGAGAGAAACTATGGATTGGTTGCGAGAACCTG GGGCGAAATGGTTTCATCAGGTTGCAATCCTGATGTAGTCACTTATACAACGTCTATGCG TGCTTACTGCATTGAAGGAAGACTAAATGAAGCAGAAAATGTTTTGATGGAGATGAGCAA AAATGGGGTCACTGTAGATACAATGGCATACAATACTCTGATGGATGGACATGCAAGTAT TGGACAGACAGATCATGCAGTCTCAATCTTGAAACAAATGACAAGTGTTGCTTCTGTGCC AAACCAGTTTACTTATTTTATCTTGCTTAGACATCTTGTACGCATGAGATTAGTGGAGGA TGTGTTGCCTTTGACCCCAGCTGGTGTGTGGAAAGCCATAGAGCTTACTGATGTCTTTGG GTTGTTTGATGTAATGAAGAAGAACGAATTTCTTCCTAATTCAGGAACTTATTCTTCCAT TCTAGAGGGGTTTTCTGAAGATGGAAGAACGGAAGAGGCGACATCGTTAGTTTCTCTTAT GAAAGAAGATAGTATATCTCTGAATGAAGACATCTATACTGCTCTCGTTACTTGTTTTTG CAAATCCAAAAGGTATTTGGATGCATGGGTGTTGGTTTGCTCTATGATTCAACATGGTTT TATACCACAGTTGATGTCCTACCAACATCTGCTTTCTGGGCTTATTTGTGAAGGACAAAC AGATAAGGCTAAAGAAATATTCATGAATTCTAGATGGAAAGACTATAGTCCCGATGAGAT TGTGTGGAAAGTGATTATTGATGGCCTGATAAAAAAAGGTCACTCAGATATATCCCGTGA AATGATTATCATGTTAGAGCGTATGAACTGCAGACCAAGTCATCAAACCTATGCAATGCT GACTGAGGAATTACCTGACAGGGAATAATATGCCACACAAGTCTCATTCATCACTCGAAG CGAAATCCCCATCAGCTGTGCAAACTGGCATCTCATTAGGTGCTGTTCAAGCACAAGGTG CACCAAGTGATGTGAAATGGATCATCCAACATACTCTCTCACACACAAAATGAGTTCACG CTCTATTTGCTCTCTGGAAGAGCAGTGATTATCAGATTTTTGAAGACTGATATGAGCGCA AAGCATTTGAATCCAGATTGTGTGTGTGCCTGTACTATATCAGGTCGACAGATAGTGTTT ACAGATTTGTAGGAGCCAAAAGTCCCATACCGCTATGGCAGGCTTCGCTACTTTATTATT TTATTGATCTGAAGAGAGGTTGCCAAGTTTGATTCGACGATTTTGTCACGGATCTTCTGA GTTACTGTGTGGCACAATTTCTGATGCTGGTTGTTGAACCGATGAGTGATCTGATTTTTT TGGGTGGCAAGTATTGTTGCCAGTAAAATATATGGAAGGGCCGAAAGATTTGGAAATGCA CTCAGCGATCAGTTTCAATAAATCATCAACATAGGAATTACTGGTCACAATCTGGGAAAG AAAGGAATCTATTAACGGACGGCCAAGATTCCCTGGCCCACTCAAAACAGCGAAATGCAC AAAGCCTCGATCGGCGTCTGACAGGCTGTCACGGACGTGGGCTCACAATCGGGCTTTCAG GCTGAATGTATGGCCCAGCCAGATAGGAAAGACAGCGTTATAAACCAAAGCCACGCTGCA GCCATAGCTGAGCACATGGAGGTGCCACATTTTGTCACACTAAATGTTACTCCATCCGTC TCATAATATAATATTTTAAGTTTTTGTTTGC