Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0580700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:22355195:22362054:1 gene:Os02g0580700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0580700-01)
Sequence	ATGGCGGAGTCGCAGGTGGAGGGGATGAGGAAGGCGTACGCGGAGATCATGCTGAACATG GCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCGGAGCGGCGGGCGGCGGCGCTCGCGGGG GGTTTGGCGGCGGCGAGGGAGGACGGCGTCGCCGCGCTCGTCAGGCTCAAGGCCATCATG GAGGCCAGGATAAAAGAAGCAGAGTCACAATCTTTGGCAAACATTAATAAGATTAAGGAA CTACAAGAGCAATTACATGGTGCTCAAGATACAGTGGCCTCCCTTCAAATTGAACTGCAG AGATCAAATACTGAACTGGAGCAAGCAAGGAGCACTTTGGCTGAGGAAAGAAGAAATAAC CTTCGCTCCTGCAATAAGATCAATTCTAATAAAAATAGCAGCTCTTCTTCTAGAAAGCAT CTACAAGGCAGAGTATCCTCAAAGAGTAAAAATACGGCAAAGGAAAGTGGAGCTGTTGAA AACTTGGAGACACTGTACCGTTGTGATTCTGATCTGGGTTCATTCATGGCTAGAACTAAG AATCCTGAGCTGTATCGCAATGGGTGTACACAACGTATCCGTGCAATCAAGCAGCGAAGT CCAAATTCGGATACATCCCTGGTAGAAAACAGCAAGCAAACTAGTGCACTGAATAGCCGT TCTAAGACTGGAAAAACTGATACCAACAGAAACCCACAGAGCACAAGGTCCATCATGGAA CAGATACTTCAAACAAAATTTCTGGCCAACTGCAAGAGAAAGAGAGGTAGGCGAAGCAGG CCAAGTTACATGCATGATAATTCTGGTGAGCATGGGCAAACAGAGTACAAGTCGTCTGAT ACATCTGATGGAAATGGGTGTTTGCTGCTACTTCAGGCTCTTGAACAAGATCTTTCACCT CTAAAGGCGTCTTCTGGAAGTGTTGGTGAGGGATTAGCTGACCAGAAGGATGAATTGCTC AAGGATGAAAAGGATGCTGACTTGAATCTTCACCCTGCTTCCCCTGGACCAAATGATGTA CTTTCAGTAAACAACATGCAGATGAAAAGGAGGAAAAGGTCTAAGACTATGAGAGTCTTT GAATCTGATTTTGAGGCAAAAGCTGCCCCTGAATTTGGGAACACCCTGCCAAAATCAAGT AATAATAATAGCATGCTAAATAGTGAACAGAGCTCTGATCCACCTGCTGGAAACAATGGT CCTGTTTTGCAATGTACTGCTGAAAACTTGATGCACGTGACTGATGCTGCAAATGCTGAT CAATTAAAGTCTGAGAACAGCTCCCCGCTAGTCCCTCAGTCAACAGAGAGTGAAATTGGA GATGAAGGTAACTCGCGAGTGGATCACAAAGAGTGTAGAACACCAGATAATAATGCAATA GTCTTGGAAGAAGTGAATGTGGATAAAAGCTGCATTATTTTAGCTTCAGATGGAGCTGAT TCTTCGATAGTCAGCTCCCTGGACAAAGAAGAAAATGCAAAAGAAGCAACTTCTGGAGTT GCCGTGCAAGCTGAAGGTGCCAGATATATCAAATACACATTCAATCGCAGGAAACGCAAG GCCGCGCCTTTAGACAGCACTCCTCAAGGGGCTGTCCCTGAGAAAAGCAGTAGTGTGGTT TGCCCATCTGAGAATCATGAGCCTCATGCAAAGCCTGAGACGCAAGATCTCGTCATAGAG TCACCTCCAGGTGACAATCAACTAATCCATGTTGCCCAGCAGCTCATATTGCTGTCAGCG CAAAAATGA

Peptide Sequence

PEP ID	Os02t0580700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:22355195:22362054:1 gene:Os02g0580700 transcript:Os02t0580700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0580700-01)
Sequence	MAESQVEGMRKAYAEIMLNMAQESAARVLAAERRAAALAGGLAAAREDGVAALVRLKAIM EARIKEAESQSLANINKIKELQEQLHGAQDTVASLQIELQRSNTELEQARSTLAEERRNN LRSCNKINSNKNSSSSSRKHLQGRVSSKSKNTAKESGAVENLETLYRCDSDLGSFMARTK NPELYRNGCTQRIRAIKQRSPNSDTSLVENSKQTSALNSRSKTGKTDTNRNPQSTRSIME QILQTKFLANCKRKRGRRSRPSYMHDNSGEHGQTEYKSSDTSDGNGCLLLLQALEQDLSP LKASSGSVGEGLADQKDELLKDEKDADLNLHPASPGPNDVLSVNNMQMKRRKRSKTMRVF ESDFEAKAAPEFGNTLPKSSNNNSMLNSEQSSDPPAGNNGPVLQCTAENLMHVTDAANAD QLKSENSSPLVPQSTESEIGDEGNSRVDHKECRTPDNNAIVLEEVNVDKSCIILASDGAD SSIVSSLDKEENAKEATSGVAVQAEGARYIKYTFNRRKRKAAPLDSTPQGAVPEKSSSVV CPSENHEPHAKPETQDLVIESPPGDNQLIHVAQQLILLSAQK

Transcript Sequence

Transcript ID	Os02t0580700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:22355195:22362054:1 gene:Os02g0580700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0580700-01)
Sequence	AGTGAAAAAGGCGAGAGCGGGAGCGCGGCCGCGCCCACCCTCCCTCCCTCCCTCCGCCTC CACCCCCATTCGATTCCCCCCCTTCCCTTCTCTTCTTCCCTCCCCAACCGCCACTCTCCC CCCCAAATCCCCCACCTCTCCTCGAGAATGGCGGAGTCGCAGGTGGAGGGGATGAGGAAG GCGTACGCGGAGATCATGCTGAACATGGCGCAGGAGTCGGCGGCGCGGGTGCTGGCGGCG GAGCGGCGGGCGGCGGCGCTCGCGGGGGGTTTGGCGGCGGCGAGGGAGGACGGCGTCGCC GCGCTCGTCAGGCTCAAGGCCATCATGGAGGCCAGGATAAAAGAAGCAGAGTCACAATCT TTGGCAAACATTAATAAGATTAAGGAACTACAAGAGCAATTACATGGTGCTCAAGATACA GTGGCCTCCCTTCAAATTGAACTGCAGAGATCAAATACTGAACTGGAGCAAGCAAGGAGC ACTTTGGCTGAGGAAAGAAGAAATAACCTTCGCTCCTGCAATAAGATCAATTCTAATAAA AATAGCAGCTCTTCTTCTAGAAAGCATCTACAAGGCAGAGTATCCTCAAAGAGTAAAAAT ACGGCAAAGGAAAGTGGAGCTGTTGAAAACTTGGAGACACTGTACCGTTGTGATTCTGAT CTGGGTTCATTCATGGCTAGAACTAAGAATCCTGAGCTGTATCGCAATGGGTGTACACAA CGTATCCGTGCAATCAAGCAGCGAAGTCCAAATTCGGATACATCCCTGGTAGAAAACAGC AAGCAAACTAGTGCACTGAATAGCCGTTCTAAGACTGGAAAAACTGATACCAACAGAAAC CCACAGAGCACAAGGTCCATCATGGAACAGATACTTCAAACAAAATTTCTGGCCAACTGC AAGAGAAAGAGAGGTAGGCGAAGCAGGCCAAGTTACATGCATGATAATTCTGGTGAGCAT GGGCAAACAGAGTACAAGTCGTCTGATACATCTGATGGAAATGGGTGTTTGCTGCTACTT CAGGCTCTTGAACAAGATCTTTCACCTCTAAAGGCGTCTTCTGGAAGTGTTGGTGAGGGA TTAGCTGACCAGAAGGATGAATTGCTCAAGGATGAAAAGGATGCTGACTTGAATCTTCAC CCTGCTTCCCCTGGACCAAATGATGTACTTTCAGTAAACAACATGCAGATGAAAAGGAGG AAAAGGTCTAAGACTATGAGAGTCTTTGAATCTGATTTTGAGGCAAAAGCTGCCCCTGAA TTTGGGAACACCCTGCCAAAATCAAGTAATAATAATAGCATGCTAAATAGTGAACAGAGC TCTGATCCACCTGCTGGAAACAATGGTCCTGTTTTGCAATGTACTGCTGAAAACTTGATG CACGTGACTGATGCTGCAAATGCTGATCAATTAAAGTCTGAGAACAGCTCCCCGCTAGTC CCTCAGTCAACAGAGAGTGAAATTGGAGATGAAGGTAACTCGCGAGTGGATCACAAAGAG TGTAGAACACCAGATAATAATGCAATAGTCTTGGAAGAAGTGAATGTGGATAAAAGCTGC ATTATTTTAGCTTCAGATGGAGCTGATTCTTCGATAGTCAGCTCCCTGGACAAAGAAGAA AATGCAAAAGAAGCAACTTCTGGAGTTGCCGTGCAAGCTGAAGGTGCCAGATATATCAAA TACACATTCAATCGCAGGAAACGCAAGGCCGCGCCTTTAGACAGCACTCCTCAAGGGGCT GTCCCTGAGAAAAGCAGTAGTGTGGTTTGCCCATCTGAGAATCATGAGCCTCATGCAAAG CCTGAGACGCAAGATCTCGTCATAGAGTCACCTCCAGGTGACAATCAACTAATCCATGTT GCCCAGCAGCTCATATTGCTGTCAGCGCAAAAATGATGAAAATTTTGTGATACATCAAAG CGGAAAGAGGGATTGGTTCGAAAGAATAATGCTTAAGGGACGGCTCCAATAAGTGGATCA TGGATCGTTTGATAATATGCTAAATGCAGTTGAGTTCTTCAACGGAGGGGGAGAGACTTG TGGTGGTAGCGGCAGAGAAATCAAGAAAGCTAGCTTCATAGTGTAGTTATACCTCTACCT AAGAGGTGTTATTATAGTAGTGTATAAATTAGGCAGGAGTTACTATTTATTTTGTAGATG ATAAATTTTGAACTATTGGTTTAAGAAGGTTATAAATTTTGAAGTGGTACTCAGTTATTA AGTCGGTTCAAATTCAGAGGTGAAACATCTGCTCATGTAAAGCAACTTACTTTTCTCTAG TTTTGGGGAAAATTTTGGTCATTTGATGGG