Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0580500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22347066:22348185:-1 gene:Os02g0580500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prohibitin. (Os02t0580500-01)
Sequence

ATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGGCC
GGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGCAG
CGCGCCGTGATCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCACC
CACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGCAC
AGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCGTC
CTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGTAC
GACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGTTC
AACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCCTC
ATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCGCC
TACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCGAG
CGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCGCC
GAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCGGC
CTGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCTCC
CCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCGGC
GCTCGGTGA

Peptide Sequence

PEP ID

Os02t0580500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22347066:22348185:-1 gene:Os02g0580500 transcript:Os02t0580500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prohibitin. (Os02t0580500-01)
Sequence

MAGGGQAAASLLTKLAQAAAGLGIAASAASTALYTVDGGQRAVIFDRFRGVLPETSSEGT
HFIVPWLQKPFIFDIRTRPHSFSSTSGTKDLQMVSLTLRVLARPDIDRLPDIFTSLGLEY
DEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRDSLIRRAAEFNIVLDDVAITHLA
YGPEFSQAVEKKQVAQQEAERSRFLVARAEQERRAAIVRAEGESEAARLISEATAAAGTG
LIELRRIEAAKEIAGELARSPNVSYIPAGDSSQMLLGLSGAR

Transcript Sequence

Transcript ID

Os02t0580500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22347066:22348185:-1 gene:Os02g0580500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Prohibitin. (Os02t0580500-01)
Sequence

AAACCCCTTTCCCAAACAATCCCCCACCGGAAAAGCAGGCGAACCCCCATCCATCGGGAT
CCATGGCCGGCGGCGGGCAGGCGGCGGCGTCGCTGCTGACGAAGCTGGCGCAGGCGGCGG
CCGGGCTGGGCATCGCGGCGTCGGCGGCGTCGACGGCGCTGTACACGGTGGACGGCGGGC
AGCGCGCCGTGATCTTCGACCGGTTCCGCGGCGTGCTCCCGGAGACCTCGTCGGAGGGCA
CCCACTTCATCGTCCCCTGGCTCCAGAAGCCCTTCATCTTCGACATCCGCACCCGCCCGC
ACAGCTTCTCCTCCACCTCTGGGACCAAGGACCTGCAGATGGTCAGCCTCACCCTCCGCG
TCCTCGCGCGCCCCGACATCGACCGCCTCCCGGACATCTTCACCTCGCTGGGCCTCGAGT
ACGACGAGAAGGTGCTCCCCTCCATCGGCAACGAGGTGCTCAAGGCCGTCGTCGCGCAGT
TCAACGCCGACCAGCTCCTCACCGAGCGCCCCCACGTCTCCGCGCTTGTCCGCGACTCCC
TCATCCGCCGCGCCGCCGAGTTCAACATCGTCCTCGACGACGTCGCCATCACGCACCTCG
CCTACGGCCCGGAGTTCTCCCAGGCCGTCGAGAAGAAGCAGGTGGCGCAGCAGGAGGCCG
AGCGGTCCAGGTTCCTCGTCGCGCGCGCCGAGCAGGAGAGGCGCGCCGCCATCGTCCGCG
CCGAGGGGGAGAGCGAGGCCGCGCGCCTCATCTCCGAGGCCACCGCCGCCGCGGGCACCG
GCCTGATCGAGCTCAGGAGGATCGAGGCCGCCAAGGAGATCGCCGGGGAGCTTGCGCGCT
CCCCCAATGTCTCGTACATCCCGGCCGGCGACAGCAGCCAGATGCTGCTTGGTCTCAGCG
GCGCTCGGTGAATGAATCATCATCTTTCCCTTTAGTCAGTTGCATTACCTTTTAGATCTT
ATTATCACTTCATGGTATTATTGGATCCCATAAATTTTCCACTGATGGAGATGAATTGTC
GAACAATTGCTGCATTTGTCTTGCCCAAAATATGTGGCAATTTGTTGAATTTTGTGATCC
TTCAACTACTGCAATGCAGGAATCTTATATTTAGAAATCT