Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0580400-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22339538:22343500:-1 gene:Os02g0580400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynein light chain, type 1 family protein. (Os02t0580400-01)
Sequence

ATGGATCCGGCGTCCGAGGAGCTCGAGCAGCGCAGCCGCTACCTCAGCTCGCTCATCCGC
CGCACCAAGCTCCACGCCGCGCCGGCGCTCGCCCCGCCCCCGCCCACGCCTCCCCCGGAG
CCCGAGACGAAGCTGCAGCTGGAGATGGAGCCGCAGCCGGAGCGAGTCGAGGAGGCCGCC
AAGAAGCCGGCGGCGGTGGCCGCCGTGGTGGAGAAGAGGGAGGTCAAGGGAGGGGGTGGC
GGTGGCGGCCAAGCTGGGAAGGGGAAGGGGAAGGAGAAGGAGATGGAGAAGGGGAAGGAG
GAGAGGAAGGTGTCGGTCCGGGTGCGCGCGGCCGACATGCCGCTGGCGATGCAGCGGCGC
GCGGTCCGCCTCGCCTTCGACGCCGTCGCCGCCATGCCGCGGCTCGACAGCAAGCGCCTC
GCCCTCGCCCTCAAGAAGGAATTCGACGCAACATATGGTCCTGCTTGGCACTGCATTGTT
GGTACAGGCTTTGGTTCCTATGTCACCCACTCTGTGGGAGGCTTCTTGTACTTCTCCGTC
GACAAGGTCTACGTTCTTCTCTTCAGAACCGCTGTCGAGCCATTAGGCCATCCACAATGA

Peptide Sequence

PEP ID

Os02t0580400-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22339538:22343500:-1 gene:Os02g0580400 transcript:Os02t0580400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynein light chain, type 1 family protein. (Os02t0580400-01)
Sequence

MDPASEELEQRSRYLSSLIRRTKLHAAPALAPPPPTPPPEPETKLQLEMEPQPERVEEAA
KKPAAVAAVVEKREVKGGGGGGGQAGKGKGKEKEMEKGKEERKVSVRVRAADMPLAMQRR
AVRLAFDAVAAMPRLDSKRLALALKKEFDATYGPAWHCIVGTGFGSYVTHSVGGFLYFSV
DKVYVLLFRTAVEPLGHPQ

Transcript Sequence

Transcript ID

Os02t0580400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22339538:22343500:-1 gene:Os02g0580400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Dynein light chain, type 1 family protein. (Os02t0580400-01)
Sequence

GGCCACTTCCATTTCCATTCCCCCCACCACCGCGCAGCGGCGCAGGCAGCGATGGTGACC
AACGCTCGCCGCCGCCGCCGCCTCAGGTGAGCACGACGCCCCGCGCGCGTCCCCGCACCC
TGGAAGGAAGAGCAGCAGAAGACGACTCCGACGCCCACGCCCGCCATGGATCCGGCGTCC
GAGGAGCTCGAGCAGCGCAGCCGCTACCTCAGCTCGCTCATCCGCCGCACCAAGCTCCAC
GCCGCGCCGGCGCTCGCCCCGCCCCCGCCCACGCCTCCCCCGGAGCCCGAGACGAAGCTG
CAGCTGGAGATGGAGCCGCAGCCGGAGCGAGTCGAGGAGGCCGCCAAGAAGCCGGCGGCG
GTGGCCGCCGTGGTGGAGAAGAGGGAGGTCAAGGGAGGGGGTGGCGGTGGCGGCCAAGCT
GGGAAGGGGAAGGGGAAGGAGAAGGAGATGGAGAAGGGGAAGGAGGAGAGGAAGGTGTCG
GTCCGGGTGCGCGCGGCCGACATGCCGCTGGCGATGCAGCGGCGCGCGGTCCGCCTCGCC
TTCGACGCCGTCGCCGCCATGCCGCGGCTCGACAGCAAGCGCCTCGCCCTCGCCCTCAAG
AAGGAATTCGACGCAACATATGGTCCTGCTTGGCACTGCATTGTTGGTACAGGCTTTGGT
TCCTATGTCACCCACTCTGTGGGAGGCTTCTTGTACTTCTCCGTCGACAAGGTCTACGTT
CTTCTCTTCAGAACCGCTGTCGAGCCATTAGGCCATCCACAATGAGATCAAAAATCGATT
CATTACAAGGTAAAAAATTGCTGTGTATTATATGTATCTGACGTCCAAGAGCCGTAGAAT
GTTAAGGTGAGTAGAACAATCGTGGCTCTCCATGGAAATTAATCTGCAGCCGATGTAAAC
ATTTGGCATCCAATCCATGAACTCTGGAAGCTTTTAGTTGAGTCACTTCTCCAGCATGAA
GAAAACTAGCTTTTGCTTCCGACCGTGCCTTGTATGTTGTATCTGGTTCTTATTGATCAG
AGCTAGAAAACCTGAGCTGCGAGTTGTGGTACCTGAAAAATCAGGGAAATATAGCGAGTC
TGATGATGCTTCCCATTTGGACTTCTTGGCTG