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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0578800-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22245005:22247538:1 gene:Os02g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os02t0578800-01)
Sequence

ATGGCGAAGCCTAGCGGCGGCGGCCTCCTCGACCTGGAGCACCACTTCGCCTTCTACGGC
GCGTACCACAGCAACGCCGTCAACGTCTTCATCCACACGCTCTTCGTCTGGCCCATCTTC
CTCACCGCGCTCCTCCTCCTCCACCTCGCCGCCCCCTCCGCGCACGCCGCGGCCGCCGGC
GCCGCCGTCTACGGGGCCTTCTACCTCCTCCTCGACCGCCGCGCCGGCGCCCTCGCCGCG
CTCCTCTGCTTCCTCTGCTGGGCCGCCAGCGCCGCCCTCGCCGCCCGCCTCGGCTTCTCC
GCCGGATGGAAGGTGGTATTGGTAGCTCAGCTGTTCTGTTGGACTATGCAGTTCATTGGC
CATGGTGTTTTTGAGAAGCGAGCGCCTGCCCTCCTTGACAATCTTGTCCAAGCTTTCTTG
ATGGCTCCATTCTTCGTGCTACTAGAGGCTCTTCACAAGTTTGTTGGGTACGAACCGTAT
CCTGGCTTTCACGCCAAAGTGCAGAAGCTGATTGACGAGGCCCGCAAGGAATGGGAGGAC
AAGAAAGCGAAGAAGATGACGTGA

Peptide Sequence

PEP ID

Os02t0578800-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22245005:22247538:1 gene:Os02g0578800 transcript:Os02t0578800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os02t0578800-01)
Sequence

MAKPSGGGLLDLEHHFAFYGAYHSNAVNVFIHTLFVWPIFLTALLLLHLAAPSAHAAAAG
AAVYGAFYLLLDRRAGALAALLCFLCWAASAALAARLGFSAGWKVVLVAQLFCWTMQFIG
HGVFEKRAPALLDNLVQAFLMAPFFVLLEALHKFVGYEPYPGFHAKVQKLIDEARKEWED
KKAKKMT

Transcript Sequence

Transcript ID

Os02t0578800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22245005:22247538:1 gene:Os02g0578800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF962 family protein. (Os02t0578800-01)
Sequence

AGTTCCCACCCCCGGCCAAATTGAAACTCTTGTCGTCCTCACCTGGAAGGAACCCCCCGA
ACACACGCAGCCATGGCGAAGCCTAGCGGCGGCGGCCTCCTCGACCTGGAGCACCACTTC
GCCTTCTACGGCGCGTACCACAGCAACGCCGTCAACGTCTTCATCCACACGCTCTTCGTC
TGGCCCATCTTCCTCACCGCGCTCCTCCTCCTCCACCTCGCCGCCCCCTCCGCGCACGCC
GCGGCCGCCGGCGCCGCCGTCTACGGGGCCTTCTACCTCCTCCTCGACCGCCGCGCCGGC
GCCCTCGCCGCGCTCCTCTGCTTCCTCTGCTGGGCCGCCAGCGCCGCCCTCGCCGCCCGC
CTCGGCTTCTCCGCCGGATGGAAGGTGGTATTGGTAGCTCAGCTGTTCTGTTGGACTATG
CAGTTCATTGGCCATGGTGTTTTTGAGAAGCGAGCGCCTGCCCTCCTTGACAATCTTGTC
CAAGCTTTCTTGATGGCTCCATTCTTCGTGCTACTAGAGGCTCTTCACAAGTTTGTTGGG
TACGAACCGTATCCTGGCTTTCACGCCAAAGTGCAGAAGCTGATTGACGAGGCCCGCAAG
GAATGGGAGGACAAGAAAGCGAAGAAGATGACGTGAAGTGTGATTTGGAAGTTGGCAACC
CCCATACTGCAGAGGCGTCTTAATCACGTGGCCATTTGATATTTTGATTAGACGGAACTG
TGTTAACATGTCGCTGCCAACATATTGCCTTATTTATGTTGTAATATATAAAGAGTTTTA
TGCACTCTCTTGTCTGATGTGTATACGTTACTGGAGAATATAGAATTCTGATGATGATTG
TGAACTGTATTAGAAAATAAATACAGGAAAGTCTTTTTACGGTGGTCTCTTCTGTACTGG
TACTCTACTATAAGCTGGAAAAATATATATGTAGTGC