Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0578366-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:22233461:22234247:1 gene:Os02g0578366 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein LOC_Os02g36845. (Os02t0578366-00)
Sequence

ATGGAAGCAGGTGAAGAGATCGAGGACGGTGAACCATCCACACCCACCTACAAGGCTCAT
CATCCTCCTCCCCACCTCCCGCCGCCGATGAGGTCGTCCGGCGTCAGCCTGGTCCTGTCG
GTCGCCGACCTCGTCCTCCGGTTCGTCGCCATCGGCGGCACGGCCGGCAGCGCCATCGCC
ATGGCCACCACGAGTGAGACGCTCCCCTTCGCCGCGCCGTTCGTCCGGTTCAGGGCGGAG
TACAGCGACCTCCCAACGTTAATGTTCTTCGTGGTGGCGAGCTCGGTGGTGTGCGCGTAC
CTCGTGCTGTCGCTGCCGGCGTCCGTCGTGCACGTCGTCAGGCCCGGGGCGAGGAGCAGC
CGCGCCATCCTGGCATTTCTCGACACGGTGATGCTTGCGCTGCTGACGGCCAGCGCGTCG
GCGGCGGCGGCGATCGTGTACCTGGCGCACAGGGGCAGCGCACGGGCCAACTGGCTCGGG
ATCTGCCAGCAGTTCACCTCCTTCTGCCAGCGCATCACGGCGTCGCTCGTCGGCTCGTTC
GCCGCCGCCGTCGTGCTCGTCGCCCTCGTCTTCCTCTCCGCGCTCTCGCTGGCGAGGCGC
GCCTGA

Peptide Sequence

PEP ID

Os02t0578366-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:22233461:22234247:1 gene:Os02g0578366 transcript:Os02t0578366-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein LOC_Os02g36845. (Os02t0578366-00)
Sequence

MEAGEEIEDGEPSTPTYKAHHPPPHLPPPMRSSGVSLVLSVADLVLRFVAIGGTAGSAIA
MATTSETLPFAAPFVRFRAEYSDLPTLMFFVVASSVVCAYLVLSLPASVVHVVRPGARSS
RAILAFLDTVMLALLTASASAAAAIVYLAHRGSARANWLGICQQFTSFCQRITASLVGSF
AAAVVLVALVFLSALSLARRA

Transcript Sequence

Transcript ID

Os02t0578366-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22233461:22234247:1 gene:Os02g0578366 gene_biotype:protein_coding transcript_biotype:protein_coding description:UPF0497 membrane protein LOC_Os02g36845. (Os02t0578366-00)
Sequence

ATGGAAGCAGGTGAAGAGATCGAGGACGGTGAACCATCCACACCCACCTACAAGGCTCAT
CATCCTCCTCCCCACCTCCCGCCGCCGATGAGGTCGTCCGGCGTCAGCCTGGTCCTGTCG
GTCGCCGACCTCGTCCTCCGGTTCGTCGCCATCGGCGGCACGGCCGGCAGCGCCATCGCC
ATGGCCACCACGAGTGAGACGCTCCCCTTCGCCGCGCCGTTCGTCCGGTTCAGGGCGGAG
TACAGCGACCTCCCAACGTTAATGTTCTTCGTGGTGGCGAGCTCGGTGGTGTGCGCGTAC
CTCGTGCTGTCGCTGCCGGCGTCCGTCGTGCACGTCGTCAGGCCCGGGGCGAGGAGCAGC
CGCGCCATCCTGGCATTTCTCGACACGGTGATGCTTGCGCTGCTGACGGCCAGCGCGTCG
GCGGCGGCGGCGATCGTGTACCTGGCGCACAGGGGCAGCGCACGGGCCAACTGGCTCGGG
ATCTGCCAGCAGTTCACCTCCTTCTGCCAGCGCATCACGGCGTCGCTCGTCGGCTCGTTC
GCCGCCGCCGTCGTGCTCGTCGCCCTCGTCTTCCTCTCCGCGCTCTCGCTGGCGAGGCGC
GCCTGA