Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0578300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:22229575:22231423:1 gene:Os02g0578300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0815C01.4 protein. (Os02t0578300-01)
Sequence

ATGAGCGAGATGCAGCCGCACGCCGTGTGCTTGCCGTTCCCGGCGCAGGGGCACATCACG
CCGATGATGAAGCTGGCCAAGATCCTCCACTCCAGGGGCTTCCACGTCACCTTCGTCAGC
ACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCGCCGCCGCCGCGGCCGGAATC
CCGGGGTTCCGCTTCGCCACCATCCCGGACGGCCTGCCGCCGTCCGACGCCGACGCCACG
CAGGACCCGCCGTCGCTCAGCTACTCCACCATGACCACCTGCCTCCCCCACTTCAGGAAG
CTGCTCGCCGACCTCAACAACCGCTTGGCGCCTGACGACGACGACGCCGCGCCGCCGGTC
ACCTGCGTCGTGGCCGACCACCTCATGGGCTTCAGCCTCGACGCCGCGGCGGAGCTCGGC
GTGCCGTGCGCGCTCTTCTGGACGGCCAGCGCCTGCGGCTACATGGGCTACCGCAACTTC
CGCCTGCTCATCGACATGGGCATCATTCCCCTCAAAGGGGAAGAGCAGCTGACGAACGGG
TTCATGGACATGGCGGTGGACTGGGCGCCGGGGATGAGCAAGCACATGCGGCTCAAGGAC
TTCCCCACCTTCCTCCGCACCACGGACCGCAACGACATCCTGATGACGTTCCAGCTGCGG
CAGGTGGAGCGCGCGGAGGAGGCGGACGCCGTGGTCCTCAACACGTTCGACGAGCTGGAG
CGGCCGGCGCTGGACGCCATGCGCGCCATCACCCCGGCCATCTACACCGTCGGCCCGCTC
GCGTTCCTCACGGAGCAGATCCCGCCGGGCGGGCCCCTCGACGACATCAGCCCCAGCCTC
TGGAGGGAAGACGACGCCTGCCTCCGGTGGCTCGACGGGAGGAATCCCCGGTCGGTGGTG
TACGTGAACTACGGGAGCGTGACGGTGATGAGCGGCCACGAGCTGGAGGAGTTCGCGTGG
GGGCTCGCCGGCAGTGGCCACGACTTCCTCTGGATCGTCAGGCCGGACGTCGTGACGAGG
ACCGCCGCCGCCACCGCCGCGGAGGCGGCGCTGCCGCGGGAGTTCACGGAGGCGACGAAG
GGGAGGGGGCTCGTGGCGAGCTGGTGCGACCAGGAGGCGGTGCTGCGGCACCCGGCGGTG
GGGTTGTTCCTGACGCACAGCGGGTGGAACTCGACGGTGGAGGCGCTGTCCGGCGGCGTG
CCGATGCTGTGCTGGCCGTTCTTCGCCGAGCAGCAGACCAACTGCCGGTACAAGTGCGTG
GAGTGGGGCGTGGCGATGGAGGTGGGGGACAGCGTGCGGCGGGAGGCGGTGGAGGGGAGG
ATCAGGGAGGCCATGGGAGGAGGGGAGAAGGGGAAGGAGATGAGGAGGAGGGCGGCGGAG
TGGAAGGAGGCCGCCGCTCGAGCGAGGGGACGGTCGCTCGCCAACCTTGAGAGGCTCATC
GGCGATGTACTGCTCTCTGGTAAAAAGGACAGGGTAATTTGA

Peptide Sequence

PEP ID

Os02t0578300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:22229575:22231423:1 gene:Os02g0578300 transcript:Os02t0578300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0815C01.4 protein. (Os02t0578300-01)
Sequence

MSEMQPHAVCLPFPAQGHITPMMKLAKILHSRGFHVTFVSTEYNHRRLVRSRGAAAAAGI
PGFRFATIPDGLPPSDADATQDPPSLSYSTMTTCLPHFRKLLADLNNRLAPDDDDAAPPV
TCVVADHLMGFSLDAAAELGVPCALFWTASACGYMGYRNFRLLIDMGIIPLKGEEQLTNG
FMDMAVDWAPGMSKHMRLKDFPTFLRTTDRNDILMTFQLRQVERAEEADAVVLNTFDELE
RPALDAMRAITPAIYTVGPLAFLTEQIPPGGPLDDISPSLWREDDACLRWLDGRNPRSVV
YVNYGSVTVMSGHELEEFAWGLAGSGHDFLWIVRPDVVTRTAAATAAEAALPREFTEATK
GRGLVASWCDQEAVLRHPAVGLFLTHSGWNSTVEALSGGVPMLCWPFFAEQQTNCRYKCV
EWGVAMEVGDSVRREAVEGRIREAMGGGEKGKEMRRRAAEWKEAAARARGRSLANLERLI
GDVLLSGKKDRVI

Transcript Sequence

Transcript ID

Os02t0578300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:22229575:22231423:1 gene:Os02g0578300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0815C01.4 protein. (Os02t0578300-01)
Sequence

ATTCAACATTGAGGTGAATAAACAACCCAAAATCTTGGAACCAGTCAACGATCAGCCCGA
ATTTCGCCGTTGTTGCTTGCCTACCTCTCCACTCCATCATTCGCAAATTTTTTGCAGAAC
ACAGCAAGGAGTAGCAGAGAATGAGCGAGATGCAGCCGCACGCCGTGTGCTTGCCGTTCC
CGGCGCAGGGGCACATCACGCCGATGATGAAGCTGGCCAAGATCCTCCACTCCAGGGGCT
TCCACGTCACCTTCGTCAGCACCGAGTACAACCACCGCCGCCTCGTCCGCTCCCGCGGCG
CCGCCGCCGCGGCCGGAATCCCGGGGTTCCGCTTCGCCACCATCCCGGACGGCCTGCCGC
CGTCCGACGCCGACGCCACGCAGGACCCGCCGTCGCTCAGCTACTCCACCATGACCACCT
GCCTCCCCCACTTCAGGAAGCTGCTCGCCGACCTCAACAACCGCTTGGCGCCTGACGACG
ACGACGCCGCGCCGCCGGTCACCTGCGTCGTGGCCGACCACCTCATGGGCTTCAGCCTCG
ACGCCGCGGCGGAGCTCGGCGTGCCGTGCGCGCTCTTCTGGACGGCCAGCGCCTGCGGCT
ACATGGGCTACCGCAACTTCCGCCTGCTCATCGACATGGGCATCATTCCCCTCAAAGGGG
AAGAGCAGCTGACGAACGGGTTCATGGACATGGCGGTGGACTGGGCGCCGGGGATGAGCA
AGCACATGCGGCTCAAGGACTTCCCCACCTTCCTCCGCACCACGGACCGCAACGACATCC
TGATGACGTTCCAGCTGCGGCAGGTGGAGCGCGCGGAGGAGGCGGACGCCGTGGTCCTCA
ACACGTTCGACGAGCTGGAGCGGCCGGCGCTGGACGCCATGCGCGCCATCACCCCGGCCA
TCTACACCGTCGGCCCGCTCGCGTTCCTCACGGAGCAGATCCCGCCGGGCGGGCCCCTCG
ACGACATCAGCCCCAGCCTCTGGAGGGAAGACGACGCCTGCCTCCGGTGGCTCGACGGGA
GGAATCCCCGGTCGGTGGTGTACGTGAACTACGGGAGCGTGACGGTGATGAGCGGCCACG
AGCTGGAGGAGTTCGCGTGGGGGCTCGCCGGCAGTGGCCACGACTTCCTCTGGATCGTCA
GGCCGGACGTCGTGACGAGGACCGCCGCCGCCACCGCCGCGGAGGCGGCGCTGCCGCGGG
AGTTCACGGAGGCGACGAAGGGGAGGGGGCTCGTGGCGAGCTGGTGCGACCAGGAGGCGG
TGCTGCGGCACCCGGCGGTGGGGTTGTTCCTGACGCACAGCGGGTGGAACTCGACGGTGG
AGGCGCTGTCCGGCGGCGTGCCGATGCTGTGCTGGCCGTTCTTCGCCGAGCAGCAGACCA
ACTGCCGGTACAAGTGCGTGGAGTGGGGCGTGGCGATGGAGGTGGGGGACAGCGTGCGGC
GGGAGGCGGTGGAGGGGAGGATCAGGGAGGCCATGGGAGGAGGGGAGAAGGGGAAGGAGA
TGAGGAGGAGGGCGGCGGAGTGGAAGGAGGCCGCCGCTCGAGCGAGGGGACGGTCGCTCG
CCAACCTTGAGAGGCTCATCGGCGATGTACTGCTCTCTGGTAAAAAGGACAGGGTAATTT
GATCATCAAATTCAGTAGAGCGTGTACTTGATTGGTGCAAGTAAAAGTATTATGCGGATG
CTAGTGTGCAACTGCAGCATCAGATCCATGTACCACAAATGCGTTGGTGATCCATGGCAG
CTGTGCAAATGTGACTTCTCGCCT