Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0575700-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:22096140:22100732:1 gene:Os02g0575700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 3 description:Similar to OSIGBa0097P08.1 protein. (Os02t0575700-01)
Sequence	ATGAATAACGGTTTTCCGGAAATCATTCGCCGCGGAAACCCGCATCTGATGGATAATTCC GCAGTTGTGATAATGGGACACTCTGTGGCAAGCTACACCATGGACAGCCATGGACGGAGC TCTTCTTGCCTAGACCACCTGGGTTCATCAATGGAGAACAGTAGTATCCATGGCAAGAGA GGTAACAACCGGAGGTCGGGTCATGGTGTGTCTGCGCAAGATGACGGCTGCGGGTTGGTT CTTGGATTGGGTCCATCGCCGGAGATGGGCTCCTCCGCGGCGCGCAGGTCGAAAGCGCCG GCGCCGGCGACATTGTTCAGCCAGAGGAGCTTCTCCTTCACTGAGCCAGGGGTGCTCAGC CTTGGGCTTCATCGGGGAGATCATGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCT GCTGGGAACATCATCTCCTTCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGG AGCTCCGGTGGGTACATGCCGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCT GAAGAGGCTCGTCATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGC GCGCGCCATGGCCATGCGCGGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCT GAGCCTTCGGCGACCATGACGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACG GTGACCAATCCTGTGACGACGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCAT CCGAAGAAGTGCAGGTTCAAGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGC ATCGCCCATGGCGGCGGGCAGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGC CGCACGGCCTACTGCAAGGCGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACC AAGAGCGCCGAGGGGAAGACGGATCACTGCATCGCCCACGGCGGCGGCCGCCGGTGCGGG CACCAGGGCTGCCCGAAGGCCGCGCGGGGGAAGTCCGGGCGGTGCATCAAGCATGGCGGA GGGAAGAGGTGTTCGGTCGAGGGCTGCATCCGGAGCGCGGAGGGGAGGGTCGGGCTCTGC ATCTCCCACGGCGGCGGGCGGCGGTGCCAGTACCCGGACTGCCGAAAGGGCGCGCAGGGG AGCACGCTGTACTGCAAGGCGCACGGCGGCGGCAAGCGGTGCGTGTTCGACGGGTGCCTC AAGGGCGCGGAGGGGAGCACGCCGCTGTGCAAGGCGCACGGCGGCGGGAAGCGGTGCATG TTCGAGGGCGGCGGGCTCTGCCCCAAGAGCGTCCACGGCGGCACCAGCTTCTGCGTGGCG CACGGCGGCGGGAAGCGGTGCACGGTGCCCGGGTGCGGCAAGAGCGCCCGCGGCCGCACG GACTGCTGCGTCAAGCACGGCGGCGGCAAGCGGTGCAGGGTCGACGGCTGCGCCAAGAGC GCGCAGGGGAGCACGGAGTTCTGCAAGGCCCACGGCGGCGGCAAGCGCTGCACCTGGGCC ACCGGCTGCGAGAAGTTCGCCCGCGGGCGGAGCGGCCTCTGCGCCGCGCACGGCACGCTC ATGGCCTCACAGCAGCGTCGCGCCGGCGGCGGCGGGAGCATGATCGGTCCAGGGCTCTTC CACGGCCTCGTCGGCGCCATGAACAACGGCTACTCGTCCTCCGGCGTCAGCACGGCGTCG GAGTACTCCGACGCCTGCGACGGCGCGGCGAGGAGGCAAGAGCTGATACCTCCTCAGGTG CTGGTCCCGAACTCCATGAAGTCGTCGTGCTCGTCGGCGCCGCCGCCGTCGATGGGCAGG GGCAGAGAGGGAGGAGGGTTCGTCGTCCCCGAGGGGAGGGTGCACGGTGGCGGCCTCCTG TCGTTGCTCGGCGGGAGCTTCAGGAACGTCGACGTCGACGAGCTCTGA

Peptide Sequence

PEP ID	Os02t0575700-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:22096140:22100732:1 gene:Os02g0575700 transcript:Os02t0575700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 3 description:Similar to OSIGBa0097P08.1 protein. (Os02t0575700-01)
Sequence	MNNGFPEIIRRGNPHLMDNSAVVIMGHSVASYTMDSHGRSSSCLDHLGSSMENSSIHGKR GNNRRSGHGVSAQDDGCGLVLGLGPSPEMGSSAARRSKAPAPATLFSQRSFSFTEPGVLS LGLHRGDHGGATIQHLEEAPAGNIISFAAAVDEGSTSARRSSGGYMPSLLFAPRPNASAP EEARHDVVADHTDNTVSGGGARHGHARRRVVRQLSPEPEPEPSATMTETSFGVSSDVVTT VTNPVTTQPAAAAAQSQRRHPKKCRFKGCSKGARGASGLCIAHGGGQRCQKPGCHKGAES RTAYCKAHGGGRRCMQLGCTKSAEGKTDHCIAHGGGRRCGHQGCPKAARGKSGRCIKHGG GKRCSVEGCIRSAEGRVGLCISHGGGRRCQYPDCRKGAQGSTLYCKAHGGGKRCVFDGCL KGAEGSTPLCKAHGGGKRCMFEGGGLCPKSVHGGTSFCVAHGGGKRCTVPGCGKSARGRT DCCVKHGGGKRCRVDGCAKSAQGSTEFCKAHGGGKRCTWATGCEKFARGRSGLCAAHGTL MASQQRRAGGGGSMIGPGLFHGLVGAMNNGYSSSGVSTASEYSDACDGAARRQELIPPQV LVPNSMKSSCSSAPPPSMGRGREGGGFVVPEGRVHGGGLLSLLGGSFRNVDVDEL

Transcript Sequence

Transcript ID	Os02t0575700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:22096140:22100732:1 gene:Os02g0575700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ILA1 INTERACTING PROTEIN 3 description:Similar to OSIGBa0097P08.1 protein. (Os02t0575700-01)
Sequence	TTAATCTTTTGGTTGTTTCTACCTTTGCTCTGATCGATCTATGTCTGCTTCCTGGACTTT TCAGTCTGGTAAATTTTTTCCATCAGACAGAAATTATCTGGCTACAACCTGCTGCTTCTT GATGCTCAACTACCAGAGAATTAACATCACTATCTCAGATGGTCTAGCCCGTCAGAGTTG AAGTACAGTCTGGATCAAAATTTTCCTGAAATCCAGACAGTAAGTTCATGGACAGGGCGG ACACATCGGGTTTTGTCAGTGGTGGACTCATCGGTACTTCGCTGCTGCTGATTTTCTTCC ACTTCGTCTACTCTCCAGTGCACATATAGAACAAGATCAAGAAGCACCTGATCTATCTTT GTCTCGTTGTTTCTTCCACCTTCTGTACATTGCAGGATTACTTAGCCTAGATGAATAACG GTTTTCCGGAAATCATTCGCCGCGGAAACCCGCATCTGATGGATAATTCCGCAGTTGTGA TAATGGGACACTCTGTGGCAAGCTACACCATGGACAGCCATGGACGGAGCTCTTCTTGCC TAGACCACCTGGGTTCATCAATGGAGAACAGTAGTATCCATGGCAAGAGAGGTAACAACC GGAGGTCGGGTCATGGTGTGTCTGCGCAAGATGACGGCTGCGGGTTGGTTCTTGGATTGG GTCCATCGCCGGAGATGGGCTCCTCCGCGGCGCGCAGGTCGAAAGCGCCGGCGCCGGCGA CATTGTTCAGCCAGAGGAGCTTCTCCTTCACTGAGCCAGGGGTGCTCAGCCTTGGGCTTC ATCGGGGAGATCATGGTGGCGCGACGATTCAGCATCTGGAAGAAGCGCCTGCTGGGAACA TCATCTCCTTCGCCGCCGCCGTCGATGAGGGCTCGACGTCGGCGAGGAGGAGCTCCGGTG GGTACATGCCGTCGCTGCTCTTCGCGCCTCGGCCCAACGCGTCGGCTCCTGAAGAGGCTC GTCATGATGTCGTGGCGGATCACACGGACAACACCGTGAGTGGTGGTGGCGCGCGCCATG GCCATGCGCGGCGTCGCGTCGTTCGTCAGCTCAGCCCTGAGCCTGAGCCTGAGCCTTCGG CGACCATGACGGAGACCTCGTTCGGTGTGAGCTCCGACGTGGTCACGACGGTGACCAATC CTGTGACGACGCAGCCGGCGGCGGCGGCGGCGCAGTCGCAACGCCGGCATCCGAAGAAGT GCAGGTTCAAGGGGTGCTCCAAAGGAGCGCGAGGCGCGTCGGGGCTGTGCATCGCCCATG GCGGCGGGCAGAGGTGCCAGAAGCCCGGGTGCCACAAGGGCGCCGAGAGCCGCACGGCCT ACTGCAAGGCGCATGGCGGTGGCCGCCGGTGCATGCAGCTCGGCTGCACCAAGAGCGCCG AGGGGAAGACGGATCACTGCATCGCCCACGGCGGCGGCCGCCGGTGCGGGCACCAGGGCT GCCCGAAGGCCGCGCGGGGGAAGTCCGGGCGGTGCATCAAGCATGGCGGAGGGAAGAGGT GTTCGGTCGAGGGCTGCATCCGGAGCGCGGAGGGGAGGGTCGGGCTCTGCATCTCCCACG GCGGCGGGCGGCGGTGCCAGTACCCGGACTGCCGAAAGGGCGCGCAGGGGAGCACGCTGT ACTGCAAGGCGCACGGCGGCGGCAAGCGGTGCGTGTTCGACGGGTGCCTCAAGGGCGCGG AGGGGAGCACGCCGCTGTGCAAGGCGCACGGCGGCGGGAAGCGGTGCATGTTCGAGGGCG GCGGGCTCTGCCCCAAGAGCGTCCACGGCGGCACCAGCTTCTGCGTGGCGCACGGCGGCG GGAAGCGGTGCACGGTGCCCGGGTGCGGCAAGAGCGCCCGCGGCCGCACGGACTGCTGCG TCAAGCACGGCGGCGGCAAGCGGTGCAGGGTCGACGGCTGCGCCAAGAGCGCGCAGGGGA GCACGGAGTTCTGCAAGGCCCACGGCGGCGGCAAGCGCTGCACCTGGGCCACCGGCTGCG AGAAGTTCGCCCGCGGGCGGAGCGGCCTCTGCGCCGCGCACGGCACGCTCATGGCCTCAC AGCAGCGTCGCGCCGGCGGCGGCGGGAGCATGATCGGTCCAGGGCTCTTCCACGGCCTCG TCGGCGCCATGAACAACGGCTACTCGTCCTCCGGCGTCAGCACGGCGTCGGAGTACTCCG ACGCCTGCGACGGCGCGGCGAGGAGGCAAGAGCTGATACCTCCTCAGGTGCTGGTCCCGA ACTCCATGAAGTCGTCGTGCTCGTCGGCGCCGCCGCCGTCGATGGGCAGGGGCAGAGAGG GAGGAGGGTTCGTCGTCCCCGAGGGGAGGGTGCACGGTGGCGGCCTCCTGTCGTTGCTCG GCGGGAGCTTCAGGAACGTCGACGTCGACGAGCTCTGAAGCAGCAGCGCTCGTGTGAGAA AATCAGTGTCAGTTTCTGCATCTCAAAAAACGGAGGAAAAAAAACGAAGAGAAAAAAAGA AAGAGATTCTATAGCTCATATAGATGTTAGGTTGGTACGAAACTTCATAGATTGTTTTGA TGTTATTATCGTGTCAAGATTCAAGTCTCAGGGCATGAACTTGTCAGGGGATTTCAAATG TTTTGAGTTCGTTGTGAATAAAATGTAGTAGACATGAACTTGTCAGGGGATTTC