Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0573500-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21995524:22002502:1 gene:Os02g0573500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os02t0573500-01)
Sequence

ATGGCCAGAGGGGGAGCGATGGTCGCGGCGGCGGATGCCGGCGCCGGCGCCGGCGTGGCG
CCCGGGTACAGCAGCGAGATCACGTTCACCGTGGTGATGAGCTGCCTCATGGCGGCCTCC
GGCGGGCTCATTTTCGGCTACGACATCAGCATCACAGGTGGACTGACGCAGATGCAGTCG
TTCCTCGAGGCGTTCTTCCCAGACATCTGGGCGAAGATGAACAACGCCGAGCAGGACGCG
TACTGCATCTTCGACAGCCAGGTGCTCACCACCTTCGTCTCCTCGCTCTACCTCGCCGGC
GTTTTCGCCTGCCTCATCGCCGGCCACGTCACCCGGAGGGTGGGCCGGAGGAACTCCATG
CTCATCGGCGCCTCTCTCTTCTTCGTCGGCGCCATCCTCAACTGCGCCGCCGTCAACATC
GCCATGCTCGTCATCGGCCGCATCCTCCTCGGCTTCGCCGTCGGCTTCACCAACCAGTCT
GCGCCGGTGTACCTGGCGGAGATAGCTCCGGCGCGGTGGCGCGGGGCGTTCACGAGCATC
TTCCACTTCTTCCTCAACGTGGGGATGTTCGTGGCCGACCTGGTGAACTACCGCGCCAAC
ACCATCCCGGTCTGGGGCTGGCGGCTGTCGCTCGGCGTCGCCGTCGTCCCGGCCGCCGTC
ATCCTGGTGGGCGCCGCGTTCATCCCGGACACGCCCAACAGCCTCGTCCTGCGCGGGAAG
CTCGACGAGGCCCGCGCCTCGCTGCGCCGCATCCGCGGAGCCGCCGCCAACATCGACGCC
GAGCTCAAGGACATCGCCCGCGCCGCGGAGGAGGACCGGCAGCACCACACCGGCGCGTTC
CGGCGCATCGTGCGGCGGGAGTACCGCCCGCACCTGGTGATGGCGATCGCCATCCCGGTG
TTCTTCGAGCTGACGGGGATGATCGTGGTGACGCTGTTCACGCCGCTGCTGTTCTACACG
GTGGGGTTCTCGAGCCAGAAGGCCATCCTGGGGTCCATCATCACCGACGTGGTGAGCCTG
GCGTCCATCGCGGCGGCGGCGCTGACCGTGGACAGGTACGGGCGGCGGACGCTGTTCATG
GTGGGCGGCGGCGTGCTGCTGGTGTGCCTGACGGGCATGGCGTGGACGTACGGGGCGCGG
CTGGGGAGCGACGGCGGGAAGGCGATGCCGCGCGGGTACGCGGTGGCGGTGGTGGCGCTG
GTGTGCCTGTACGACGCCGGGTTCGGCATCTCGTGGGGGCCCCTCAAGTGGATCATCCCC
AGCGAGATCTTCCCGCTGGAGGTGAGGTCGGCGGGGCAGAGCATGAGCGAGGCCATCTCG
CTGGCGCTCACCTTCGCGCAGACACAGTCGTTCCTCCGGATGCTGTGCAGCTTCAAGTTC
GGCGCCTTCGCGTACAACGCCGCGTGGGTGGTGGTCATGACGGCGTTCGTGGCGCTCCTC
CTGCCGGAGACCAAGGGGGTGCCCATCGAGTCGCTCGGCGCGGTGTGGGCGCAGCACTGG
TACTGGAAGCGCTTCGTCAAGCCGCCGCCGCCGCCGCCATCGACGGCGGCGGAGACCAAG
CAGGCGGACGGGGCTCCGGCATGA

Peptide Sequence

PEP ID

Os02t0573500-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21995524:22002502:1 gene:Os02g0573500 transcript:Os02t0573500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os02t0573500-01)
Sequence

MARGGAMVAAADAGAGAGVAPGYSSEITFTVVMSCLMAASGGLIFGYDISITGGLTQMQS
FLEAFFPDIWAKMNNAEQDAYCIFDSQVLTTFVSSLYLAGVFACLIAGHVTRRVGRRNSM
LIGASLFFVGAILNCAAVNIAMLVIGRILLGFAVGFTNQSAPVYLAEIAPARWRGAFTSI
FHFFLNVGMFVADLVNYRANTIPVWGWRLSLGVAVVPAAVILVGAAFIPDTPNSLVLRGK
LDEARASLRRIRGAAANIDAELKDIARAAEEDRQHHTGAFRRIVRREYRPHLVMAIAIPV
FFELTGMIVVTLFTPLLFYTVGFSSQKAILGSIITDVVSLASIAAAALTVDRYGRRTLFM
VGGGVLLVCLTGMAWTYGARLGSDGGKAMPRGYAVAVVALVCLYDAGFGISWGPLKWIIP
SEIFPLEVRSAGQSMSEAISLALTFAQTQSFLRMLCSFKFGAFAYNAAWVVVMTAFVALL
LPETKGVPIESLGAVWAQHWYWKRFVKPPPPPPSTAAETKQADGAPA

Transcript Sequence

Transcript ID

Os02t0573500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21995524:22002502:1 gene:Os02g0573500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Monosaccharide transporter 1. (Os02t0573500-01)
Sequence

ACACTCGCGTTGAGCTGTGCGGGCTATTTTTTTTTTCTCTCTGATTTGCTGAATTGCTGC
TGCGGGCGGTGGAGATGGCCAGAGGGGGAGCGATGGTCGCGGCGGCGGATGCCGGCGCCG
GCGCCGGCGTGGCGCCCGGGTACAGCAGCGAGATCACGTTCACCGTGGTGATGAGCTGCC
TCATGGCGGCCTCCGGCGGGCTCATTTTCGGCTACGACATCAGCATCACAGGTGGACTGA
CGCAGATGCAGTCGTTCCTCGAGGCGTTCTTCCCAGACATCTGGGCGAAGATGAACAACG
CCGAGCAGGACGCGTACTGCATCTTCGACAGCCAGGTGCTCACCACCTTCGTCTCCTCGC
TCTACCTCGCCGGCGTTTTCGCCTGCCTCATCGCCGGCCACGTCACCCGGAGGGTGGGCC
GGAGGAACTCCATGCTCATCGGCGCCTCTCTCTTCTTCGTCGGCGCCATCCTCAACTGCG
CCGCCGTCAACATCGCCATGCTCGTCATCGGCCGCATCCTCCTCGGCTTCGCCGTCGGCT
TCACCAACCAGTCTGCGCCGGTGTACCTGGCGGAGATAGCTCCGGCGCGGTGGCGCGGGG
CGTTCACGAGCATCTTCCACTTCTTCCTCAACGTGGGGATGTTCGTGGCCGACCTGGTGA
ACTACCGCGCCAACACCATCCCGGTCTGGGGCTGGCGGCTGTCGCTCGGCGTCGCCGTCG
TCCCGGCCGCCGTCATCCTGGTGGGCGCCGCGTTCATCCCGGACACGCCCAACAGCCTCG
TCCTGCGCGGGAAGCTCGACGAGGCCCGCGCCTCGCTGCGCCGCATCCGCGGAGCCGCCG
CCAACATCGACGCCGAGCTCAAGGACATCGCCCGCGCCGCGGAGGAGGACCGGCAGCACC
ACACCGGCGCGTTCCGGCGCATCGTGCGGCGGGAGTACCGCCCGCACCTGGTGATGGCGA
TCGCCATCCCGGTGTTCTTCGAGCTGACGGGGATGATCGTGGTGACGCTGTTCACGCCGC
TGCTGTTCTACACGGTGGGGTTCTCGAGCCAGAAGGCCATCCTGGGGTCCATCATCACCG
ACGTGGTGAGCCTGGCGTCCATCGCGGCGGCGGCGCTGACCGTGGACAGGTACGGGCGGC
GGACGCTGTTCATGGTGGGCGGCGGCGTGCTGCTGGTGTGCCTGACGGGCATGGCGTGGA
CGTACGGGGCGCGGCTGGGGAGCGACGGCGGGAAGGCGATGCCGCGCGGGTACGCGGTGG
CGGTGGTGGCGCTGGTGTGCCTGTACGACGCCGGGTTCGGCATCTCGTGGGGGCCCCTCA
AGTGGATCATCCCCAGCGAGATCTTCCCGCTGGAGGTGAGGTCGGCGGGGCAGAGCATGA
GCGAGGCCATCTCGCTGGCGCTCACCTTCGCGCAGACACAGTCGTTCCTCCGGATGCTGT
GCAGCTTCAAGTTCGGCGCCTTCGCGTACAACGCCGCGTGGGTGGTGGTCATGACGGCGT
TCGTGGCGCTCCTCCTGCCGGAGACCAAGGGGGTGCCCATCGAGTCGCTCGGCGCGGTGT
GGGCGCAGCACTGGTACTGGAAGCGCTTCGTCAAGCCGCCGCCGCCGCCGCCATCGACGG
CGGCGGAGACCAAGCAGGCGGACGGGGCTCCGGCATGAGAGACGTGGTGGTGGGGGGCTG
GGCATTGACACGTACGTACGTTGTGTTAGCTAATGCTGATGGGCTCGTGATGTCGGGCAC
TGCATGCATGGTGCGGTGGTGTGGAGTGTGGACTCGATATCCATCGGCATCGCCGTTGTT
GGGGTTAGCCACACGGGCAACTGGGCAAACCGGGGCGATGGACATGGATGATCGAACAAG
TCGACTAGTTCTGTCTTGTGTAACGCAGACACGGTAGAGTCTGACCATCAAACGTTACTT
ATCACAT