Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0572400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21930667:21935565:-1 gene:Os02g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBA2 description:Similar to Riboflavin biosynthesis protein ribA, chloroplast precursor [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4- phosphate synthase (DHBP synthase)]. (Os02t0572400-01);Similar to predicted protein. (Os02t0572400-02)
Sequence	ATGGCGTCGATTTCGCCGACGTCTTCATCGGTCGCCGCCCTCCGCGGCCACCCGGTGCAG TTCGTGAAAGGCGGTGCAGTCTCCAAGGAAGCAAAGGGATCAATTTCCTTCTCACCCGTT GCGAATTCAAATAATGCCAATGTGAAATTTACGGGCTTGAGGGTAGCAGCATCATTGAAA AGGGATGGTGCTTTTCCAGGCGACGGTTACTCAGGGAATGATAACACGGTGTTACCAAAG AGCACTTCTGTTCGTGGCCAGGACTATCCAACTGCTGACTCTGTACTCCCAACGGAATCC ATCATCGTGCCAGAAATCAGTAATGCTGGTTTGAAATGTGTTGCGGACATGTTCTCAGAT GAGGACAAAGACACTGAACAAGATTTGGATAGCCCAACTGAGGGCTTCTCGTCTATTTCC GAGGCCATCAAAGATATTCAACAAGGAAAACTTGTGATTGTTGTTGACGATGAATCAAGA GAAAATGAGGGAGATCTTATAATGGCTGCTTCTTTGGTTACCCCAGAGGCCATGGCGTTT GTTGTAAGATATGGCACAGGAATAGTGTGTGTTAGCATGAAAGAAGAGGATCTTGAAAGA TTGAACCTTCCTTTGATGGTTGCAACAAAGGAAAATGAGGAGAAGCTCTGTACTGCATTC ACTGTTACAGTGGATGCTAAAGAGGGAACAACAACTGGGGTATCTGCAAAGGATAGGGCA AAGACAGTTATGACTCTTGCATCCCCTGACTCTAAGCCTGAAGACTTCAATCGGCCTGGT CATATTTTCCCTCTGAAATACAGAGAGGGTGGTGTTCTGAAACGAGCTGGACATACTGAA GCATCTGTAGATCTTGCTATGTTAGCTGGGTTACCTCCTGCTGCGGTCTTATGTGAGATT GTGGATGAGGATGGGTCCATGGCTCGCCTACCAAAGCTGCGCGTGTTTGCTGAAAGGGAG AATTTGAAGATTGTATCCATTGCTGACTTGATTAGATATAGGAGAAAAAGAGACAGGCTA GTTGAACGTTCATCTGTTGCACGCTTACCTTTGAGATGGGGTAATGTCCGCGCTTACTGC TACAGATCTGTTATTGATGGGATAGAGCATATTGCAATGGTGAAAGGGGAGATTGGAGAT GGTCAAGGCGTTTTAGTGAGGGTGCACTCCGAATGCCTCACAGGGGACATTTTTGGATCA GCAAGATGTGATTGTGGTGATCAGCTTGCCATGGCAATGGAGATGATTGAGAAGGCTGGA AGGGGTGTACTAGTTTATCTTCGTGGACATGAAGGGAGGGGTATTGGTCTCGGTCACAAG CTCCGTGCTTATAACCTGCAAGATGACGGGCGCGACACTGTGGAGGCTAATGAAGACCTA GGACTGCCTGTGGATTCACGGGAATATGGCATTGGTGCACAGATATTACGTGATCTGGGG GTCCGTTCAATGAAGTTGATGACTAATAACCCAGCAAAGTATGGTGGTCTCAAGGGTTAT GGATTGAGCATTGTGGGCAGGGTTCCCTTGGTAACTCCAATCACCTCAGAGAATCGGAGA TACCTGGAAACAAAGAGAACAAAGATGGGGCATGTATATGGATTGGCCAATGGCCAAGCT AGCCATCAGACGGGCAGCAATGGTGCCAAAGGGGAGCATTAG

Peptide Sequence

PEP ID	Os02t0572400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21930667:21935565:-1 gene:Os02g0572400 transcript:Os02t0572400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBA2 description:Similar to Riboflavin biosynthesis protein ribA, chloroplast precursor [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4- phosphate synthase (DHBP synthase)]. (Os02t0572400-01);Similar to predicted protein. (Os02t0572400-02)
Sequence	MASISPTSSSVAALRGHPVQFVKGGAVSKEAKGSISFSPVANSNNANVKFTGLRVAASLK RDGAFPGDGYSGNDNTVLPKSTSVRGQDYPTADSVLPTESIIVPEISNAGLKCVADMFSD EDKDTEQDLDSPTEGFSSISEAIKDIQQGKLVIVVDDESRENEGDLIMAASLVTPEAMAF VVRYGTGIVCVSMKEEDLERLNLPLMVATKENEEKLCTAFTVTVDAKEGTTTGVSAKDRA KTVMTLASPDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLPPAAVLCEI VDEDGSMARLPKLRVFAERENLKIVSIADLIRYRRKRDRLVERSSVARLPLRWGNVRAYC YRSVIDGIEHIAMVKGEIGDGQGVLVRVHSECLTGDIFGSARCDCGDQLAMAMEMIEKAG RGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEDLGLPVDSREYGIGAQILRDLG VRSMKLMTNNPAKYGGLKGYGLSIVGRVPLVTPITSENRRYLETKRTKMGHVYGLANGQA SHQTGSNGAKGEH

Transcript Sequence

Transcript ID	Os02t0572400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21930667:21935565:-1 gene:Os02g0572400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBA2 description:Similar to Riboflavin biosynthesis protein ribA, chloroplast precursor [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4- phosphate synthase (DHBP synthase)]. (Os02t0572400-01);Similar to predicted protein. (Os02t0572400-02)
Sequence	ACACCCACACCAACCCCATCCCTAATCACCACCACCCCCCCATCCCACCATCGAACCGCC ACCAAAAAAAGCCGAAGCTCGCTCGCCGCCGCCGCCGCCGCCGGGGACTTCGCCGGAGGG AGGAGAAGCCAACCCGCCCGCCCGCGCGCGCGTACGTACGAGGCCTGCTCCTTCCGTCGG AAGGGAAGCATCGGGATGGCGTCGATTTCGCCGACGTCTTCATCGGTCGCCGCCCTCCGC GGCCACCCGGTGCAGTTCGTGAAAGGCGGTGCAGTCTCCAAGGAAGCAAAGGGATCAATT TCCTTCTCACCCGTTGCGAATTCAAATAATGCCAATGTGAAATTTACGGGCTTGAGGGTA GCAGCATCATTGAAAAGGGATGGTGCTTTTCCAGGCGACGGTTACTCAGGGAATGATAAC ACGGTGTTACCAAAGAGCACTTCTGTTCGTGGCCAGGACTATCCAACTGCTGACTCTGTA CTCCCAACGGAATCCATCATCGTGCCAGAAATCAGTAATGCTGGTTTGAAATGTGTTGCG GACATGTTCTCAGATGAGGACAAAGACACTGAACAAGATTTGGATAGCCCAACTGAGGGC TTCTCGTCTATTTCCGAGGCCATCAAAGATATTCAACAAGGAAAACTTGTGATTGTTGTT GACGATGAATCAAGAGAAAATGAGGGAGATCTTATAATGGCTGCTTCTTTGGTTACCCCA GAGGCCATGGCGTTTGTTGTAAGATATGGCACAGGAATAGTGTGTGTTAGCATGAAAGAA GAGGATCTTGAAAGATTGAACCTTCCTTTGATGGTTGCAACAAAGGAAAATGAGGAGAAG CTCTGTACTGCATTCACTGTTACAGTGGATGCTAAAGAGGGAACAACAACTGGGGTATCT GCAAAGGATAGGGCAAAGACAGTTATGACTCTTGCATCCCCTGACTCTAAGCCTGAAGAC TTCAATCGGCCTGGTCATATTTTCCCTCTGAAATACAGAGAGGGTGGTGTTCTGAAACGA GCTGGACATACTGAAGCATCTGTAGATCTTGCTATGTTAGCTGGGTTACCTCCTGCTGCG GTCTTATGTGAGATTGTGGATGAGGATGGGTCCATGGCTCGCCTACCAAAGCTGCGCGTG TTTGCTGAAAGGGAGAATTTGAAGATTGTATCCATTGCTGACTTGATTAGATATAGGAGA AAAAGAGACAGGCTAGTTGAACGTTCATCTGTTGCACGCTTACCTTTGAGATGGGGTAAT GTCCGCGCTTACTGCTACAGATCTGTTATTGATGGGATAGAGCATATTGCAATGGTGAAA GGGGAGATTGGAGATGGTCAAGGCGTTTTAGTGAGGGTGCACTCCGAATGCCTCACAGGG GACATTTTTGGATCAGCAAGATGTGATTGTGGTGATCAGCTTGCCATGGCAATGGAGATG ATTGAGAAGGCTGGAAGGGGTGTACTAGTTTATCTTCGTGGACATGAAGGGAGGGGTATT GGTCTCGGTCACAAGCTCCGTGCTTATAACCTGCAAGATGACGGGCGCGACACTGTGGAG GCTAATGAAGACCTAGGACTGCCTGTGGATTCACGGGAATATGGCATTGGTGCACAGATA TTACGTGATCTGGGGGTCCGTTCAATGAAGTTGATGACTAATAACCCAGCAAAGTATGGT GGTCTCAAGGGTTATGGATTGAGCATTGTGGGCAGGGTTCCCTTGGTAACTCCAATCACC TCAGAGAATCGGAGATACCTGGAAACAAAGAGAACAAAGATGGGGCATGTATATGGATTG GCCAATGGCCAAGCTAGCCATCAGACGGGCAGCAATGGTGCCAAAGGGGAGCATTAGGCC AATCGGACTCAGGTTCACATTCTAATCCACGACAATCTTATGTGATGGAGTTTGTCAAAT TATGCTACAACATATGTTCGTGGTGAACCAATTTTTTTTTAGCTGACAGTAGGTTGAAAG ATGGGCGTAATAAAAGTATCCCTTTATTTGTTGTAATCCACAGCCACACAACTGGGTTAT TACTGTAAATATATACACACACATAAACTGCTCCCTAGCGGGTACAGACTCCAGCCTTAC CTGAATTGAGAAGACTGGCGATAAAAATATCGACTGAGATCCAAGGCAATACTAGTATGA ATCTAACTCCCAATATTGAAAGAATTTTTGTTCTGGG