Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0572200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21917368:21918679:1 gene:Os02g0572200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion protein). (Os02t0572200-01)
Sequence	ATGGGGCGGCGCGCGCGCTGCCTCTGCCTCCTCCTCCTCCTCCTCCTCGTCGTAGGTGGC GGTTTCCACGTGGCCAACGCGCAGGCGTCGCCGGCGCCGCCACAGACGGGCACGAGGGCG GTCAACCGCGCCGTGTCCACCGTCATCACCGTCGTCATCGGCGTCTTCTTCGTCCTCGTC TTCGTATGCGTCATCGTCAACCAGTGCTGCGACTGCGACTCCTCCGCTGGCGCTGGGGCT GGGCAAGGGCAGTCGTCGGCTGCTCGGCGCCGCCGCGGGCTCGACCCGGCGGCGGTGGCG GCGATCCCGGTCGTGCCGTACGCGGAGGTCAGGAAGCACAGGAGCGGCGGCGGCGGCGCG CTGGAGTGCGCCGTGTGCCTCACCGTGTTCGACGACGGGGACGACCTCCGCCTCCTCCCG CAGTGCTCCCACGCGTTCCACCCCGACTGCATCGACCCCTGGCTCGAGGGCCACGTCACC TGCCCGCTGTGCCGCGCCAACCTCGAGAAGCAGCCAGCGCCGTCGCCGCCTGCCGTGGAG TTCTCCTCCTCGCCTGCTGCGGCCGCGGCGGCGGCGGAGGAGTCGCGTACGCCCGAGGCC GCGGCGGTGCGGGTTGAGGAGGTGGCGGAGGCGAGCGACGAAGAGGAGACGAGGAGGAGG GAGGAGGAGGCCGTGGAGCTGGAGAGTCTGCGCGCCGTGCGGCGGGCGGCGAGGATGCCG AGGTCGAACTCGACGGGGCACTCGCTGTGCGCGCTGCCGGCGCCGCGCGCGCCGGGGCCG GGCGACGGCGGTGACCACGAGAGGTTCACGGTGCGGCTGCCGCCGCACGTCCGGGAGGAG GTGCTCAAGTCGAGGCGCCTCCGGCACGCCACGAGCCTCGTCCTCGGCATCAGGGGATCG AGCCGCGAGGGCAGCTCGAGGGGCGGCGGCGGGAGCTGGCACGGCGCGCGGCGGTGGCCG TCCTTCCTGGCAAGGACGGTGTCGTGGGCGCGCGGCGGCGTGGGAGCGGACACCAGCGCG AAGGAGACGCCATGCCGTGATGCGGTCTGA

Peptide Sequence

PEP ID	Os02t0572200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21917368:21918679:1 gene:Os02g0572200 transcript:Os02t0572200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion protein). (Os02t0572200-01)
Sequence	MGRRARCLCLLLLLLLVVGGGFHVANAQASPAPPQTGTRAVNRAVSTVITVVIGVFFVLV FVCVIVNQCCDCDSSAGAGAGQGQSSAARRRRGLDPAAVAAIPVVPYAEVRKHRSGGGGA LECAVCLTVFDDGDDLRLLPQCSHAFHPDCIDPWLEGHVTCPLCRANLEKQPAPSPPAVE FSSSPAAAAAAAEESRTPEAAAVRVEEVAEASDEEETRRREEEAVELESLRAVRRAARMP RSNSTGHSLCALPAPRAPGPGDGGDHERFTVRLPPHVREEVLKSRRLRHATSLVLGIRGS SREGSSRGGGGSWHGARRWPSFLARTVSWARGGVGADTSAKETPCRDAV

Transcript Sequence

Transcript ID	Os02t0572200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21917368:21918679:1 gene:Os02g0572200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3I (YGHL1-C3HC4 RING fusion protein). (Os02t0572200-01)
Sequence	ATCACTTTGCCGCCGCCGCCGCCGTTTCCTCCTCCTCCCTTTCCGAGAGAGATGGGGCGG CGCGCGCGCTGCCTCTGCCTCCTCCTCCTCCTCCTCCTCGTCGTAGGTGGCGGTTTCCAC GTGGCCAACGCGCAGGCGTCGCCGGCGCCGCCACAGACGGGCACGAGGGCGGTCAACCGC GCCGTGTCCACCGTCATCACCGTCGTCATCGGCGTCTTCTTCGTCCTCGTCTTCGTATGC GTCATCGTCAACCAGTGCTGCGACTGCGACTCCTCCGCTGGCGCTGGGGCTGGGCAAGGG CAGTCGTCGGCTGCTCGGCGCCGCCGCGGGCTCGACCCGGCGGCGGTGGCGGCGATCCCG GTCGTGCCGTACGCGGAGGTCAGGAAGCACAGGAGCGGCGGCGGCGGCGCGCTGGAGTGC GCCGTGTGCCTCACCGTGTTCGACGACGGGGACGACCTCCGCCTCCTCCCGCAGTGCTCC CACGCGTTCCACCCCGACTGCATCGACCCCTGGCTCGAGGGCCACGTCACCTGCCCGCTG TGCCGCGCCAACCTCGAGAAGCAGCCAGCGCCGTCGCCGCCTGCCGTGGAGTTCTCCTCC TCGCCTGCTGCGGCCGCGGCGGCGGCGGAGGAGTCGCGTACGCCCGAGGCCGCGGCGGTG CGGGTTGAGGAGGTGGCGGAGGCGAGCGACGAAGAGGAGACGAGGAGGAGGGAGGAGGAG GCCGTGGAGCTGGAGAGTCTGCGCGCCGTGCGGCGGGCGGCGAGGATGCCGAGGTCGAAC TCGACGGGGCACTCGCTGTGCGCGCTGCCGGCGCCGCGCGCGCCGGGGCCGGGCGACGGC GGTGACCACGAGAGGTTCACGGTGCGGCTGCCGCCGCACGTCCGGGAGGAGGTGCTCAAG TCGAGGCGCCTCCGGCACGCCACGAGCCTCGTCCTCGGCATCAGGGGATCGAGCCGCGAG GGCAGCTCGAGGGGCGGCGGCGGGAGCTGGCACGGCGCGCGGCGGTGGCCGTCCTTCCTG GCAAGGACGGTGTCGTGGGCGCGCGGCGGCGTGGGAGCGGACACCAGCGCGAAGGAGACG CCATGCCGTGATGCGGTCTGATCCGTGCAAAGCCGGCGAGATTTTGTGAAAAAAAATTTC TCTTTTTATGTAGAGGAATTAATTTAATTTGTTCGCGTGCGAAGGCTGAAAAACCTTGTA CATACACCAGGTTGTTTGCCATTTGAAATTATTATAATTTTGCTTATTAGTAGTAATCGC GTGCACGTAATGTACAAACCGTGGCAAATATATTTGAAATTTCGTTTGTTTT