Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0567100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21563496:21566565:-1 gene:Os02g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os02t0567100-01)
Sequence

ATGATCACCGCCTCCCTCCTCCCCCTCCCCGCGACTTCCTCCTCCTCCGGCCGCCGCTCC
CTCCCGCCGCCGACCACCACCTTCCCGAGACCTCCTCCTCCCCTCCGCCGCCACCGCCAC
CTCTCCTCCTCCTCCTCCTCCGCGTCGTCCACGGAGAGCGACGGCGGCGGCGGGAGCACG
AACGGGTCGCTGCCGGGGCTCCCCCCCGTGGTCGTCGAGGAGGAGGAGGAGGAGTTCTGC
CCGGTGGAGTGCGTGACGGAGTTCAAGACGGAGGAGGAGCTGGCCCGCGTCCTGGAGCGC
GCCAAGGCGACGGGGGCGCTGGTGGTGGTGGACTTCTTCCGCCCGTCCTGCGGCAGCTGC
AAGTACATCGAGCAAGGCTTCATGAAGCTCTGCAAGGGCTCCGGCGACCACGGCTCCTCC
GTCGTCTTCCTCAAGCACAACGTCATCGACGAGTACGACGAGCAGTCAGAGGTGGCAGAC
CGGCTTCGCATCAAGGTGGTGCCGCTGTTCCATTTCTACAAGAACGGGGTGCTGCTGGAG
GCGTTCGCGACGCGGGACAAGGAGAGGATCATCGCCGCCATCCAGAAGTACACCGCTCCA
TCGTCGCCGCCTGCTGAATCAGAGGAGCCATCACAGGAGGGATGA

Peptide Sequence

PEP ID

Os02t0567100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21563496:21566565:-1 gene:Os02g0567100 transcript:Os02t0567100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os02t0567100-01)
Sequence

MITASLLPLPATSSSSGRRSLPPPTTTFPRPPPPLRRHRHLSSSSSSASSTESDGGGGST
NGSLPGLPPVVVEEEEEEFCPVECVTEFKTEEELARVLERAKATGALVVVDFFRPSCGSC
KYIEQGFMKLCKGSGDHGSSVVFLKHNVIDEYDEQSEVADRLRIKVVPLFHFYKNGVLLE
AFATRDKERIIAAIQKYTAPSSPPAESEEPSQEG

Transcript Sequence

Transcript ID

Os02t0567100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21563496:21566565:-1 gene:Os02g0567100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thioredoxin domain 2 containing protein. (Os02t0567100-01)
Sequence

GCAGCCATGATCACCGCCTCCCTCCTCCCCCTCCCCGCGACTTCCTCCTCCTCCGGCCGC
CGCTCCCTCCCGCCGCCGACCACCACCTTCCCGAGACCTCCTCCTCCCCTCCGCCGCCAC
CGCCACCTCTCCTCCTCCTCCTCCTCCGCGTCGTCCACGGAGAGCGACGGCGGCGGCGGG
AGCACGAACGGGTCGCTGCCGGGGCTCCCCCCCGTGGTCGTCGAGGAGGAGGAGGAGGAG
TTCTGCCCGGTGGAGTGCGTGACGGAGTTCAAGACGGAGGAGGAGCTGGCCCGCGTCCTG
GAGCGCGCCAAGGCGACGGGGGCGCTGGTGGTGGTGGACTTCTTCCGCCCGTCCTGCGGC
AGCTGCAAGTACATCGAGCAAGGCTTCATGAAGCTCTGCAAGGGCTCCGGCGACCACGGC
TCCTCCGTCGTCTTCCTCAAGCACAACGTCATCGACGAGTACGACGAGCAGTCAGAGGTG
GCAGACCGGCTTCGCATCAAGGTGGTGCCGCTGTTCCATTTCTACAAGAACGGGGTGCTG
CTGGAGGCGTTCGCGACGCGGGACAAGGAGAGGATCATCGCCGCCATCCAGAAGTACACC
GCTCCATCGTCGCCGCCTGCTGAATCAGAGGAGCCATCACAGGAGGGATGATTCCACACA
GGGTTGAGTTGCGTGTCATGATCTGAACTCAAAGTATTAGCGATCTCACTACAACGAAGA
AATTGGCATTCTATATAGGCCAGTGTATCATTAAATTGTTCAGCACAAAGAGGATGCCGC
TATAGTTATAGACTTATAGTTAACACTGCTGCATCTTTTGTGCTACAGCACAATTGTACC
ATTCCTACGGGGTGTACATTTCCCCCTTAATAATAATAATAAAGAAAAG