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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0566900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21558864:21560751:-1 gene:Os02g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os02t0566900-01)
Sequence

ATGGATACCACCAGCTTCCCGGCGGTGTGGGCGGTGGTGGGGCCGGGCGTCGCCGGCGCC
GTATTCGGGGTCGGCTGGTGGTTCTGGGTCGACGCCGTCGTCTGCAGCGCCGCCGCCGTC
CCGTTCCTTCACTACCTCCCCGGGTTATTTGCTTCGTTCGCCGCGCTCATGTTCAACTGC
GTGAAGAGGGAAGACGCCAACTACAATTACTACTCGCCCTACGACGACTCCGAGTGGAGG
TTGAAACTCTGGCTTTTTGTTTCATACGTGGTGTCTTTTGTTTCCTTGGCTGGGGCTGTT
GGTTTTTTGGTCCAAGACGCACTTACAGATACAGGTCCATCTGCATGGACTGGTGTTGCT
GGCGTCCTACAGTCTGTGTTTGTGCTTATAAGTGGGTTGATGTACTGGACTTGTCATTCT
GAAGATTGA

Peptide Sequence

PEP ID

Os02t0566900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21558864:21560751:-1 gene:Os02g0566900 transcript:Os02t0566900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os02t0566900-01)
Sequence

MDTTSFPAVWAVVGPGVAGAVFGVGWWFWVDAVVCSAAAVPFLHYLPGLFASFAALMFNC
VKREDANYNYYSPYDDSEWRLKLWLFVSYVVSFVSLAGAVGFLVQDALTDTGPSAWTGVA
GVLQSVFVLISGLMYWTCHSED

Transcript Sequence

Transcript ID

Os02t0566900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21558864:21560751:-1 gene:Os02g0566900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0220 domain containing protein. (Os02t0566900-01)
Sequence

GCAGCTTTGCAAGGACCACACTGAAAAAAAAGCTCTCAACTTTCTCCGTTCCTCTTCCCG
GCGGCGGCGATGGATACCACCAGCTTCCCGGCGGTGTGGGCGGTGGTGGGGCCGGGCGTC
GCCGGCGCCGTATTCGGGGTCGGCTGGTGGTTCTGGGTCGACGCCGTCGTCTGCAGCGCC
GCCGCCGTCCCGTTCCTTCACTACCTCCCCGGGTTATTTGCTTCGTTCGCCGCGCTCATG
TTCAACTGCGTGAAGAGGGAAGACGCCAACTACAATTACTACTCGCCCTACGACGACTCC
GAGTGGAGGTTGAAACTCTGGCTTTTTGTTTCATACGTGGTGTCTTTTGTTTCCTTGGCT
GGGGCTGTTGGTTTTTTGGTCCAAGACGCACTTACAGATACAGGTCCATCTGCATGGACT
GGTGTTGCTGGCGTCCTACAGTCTGTGTTTGTGCTTATAAGTGGGTTGATGTACTGGACT
TGTCATTCTGAAGATTGATTTAACAAGTATGCCAAGATAGACGAGGAATGTAAAGGCGAT
TCGGAAATAACCTTGTTACGGGATATGTGAAATTTTGTGTCGCACTATACAGTTCTGCTC
ATAGTTTAGTAACTCTGTAAATATAATTGCATAACAAGCAGCTCAAGTTAGTTTCACTGT
GTTACTTTGGAGTAAACAGACCTTTATGAATATAAATAGCATATATGGATCTATATCTTT
TTGCGCTAACC