Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0566300-03
CDS Infomation	cds chromosome:IRGSP-1.0:2:21519652:21522734:1 gene:Os02g0566300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0566300-01);Retrotransposon gag protein domain containing protein. (Os02t0566300-02);Peptidase aspartic, catalytic domain containing protein. (Os02t0566300-03)
Sequence	ATGACAATTTGGTATCAGAGCATCGATCCTGGAGAAGCCACGCTATACATCTCGCCTTCA GCTGCAGGTCGAAGCGATGGAGAAGCAGAATATCGACTTTGGCAAGGTCTTAATGGAGAT TCAGGAGTCGCTTGTCTCGCTGAATCGGGCGCAAGGCGAGACGCAACCGCCGTCAACAAG CTGGACCAAGGCGTGACCAACTGGAGACCGCAAGTAGAAGCGGCAGTGAAGGAGTTGCGT GAGGAGGTGGGTGATATCCGCCAGCAAATGGACCTGCTCGGCAAATCGCAGTCCGCGCCG CCGGCGACGTCTTCCCCTCGAGTTCCGTTGACGGACGAGGAAAGGAAGGCGCCGTTGCTT CCTACGCCACCAGCTTCGCGCGTGGCTGCGGCGGGGGACAGCGGAGACAAGTGGGCCAGT GGCCGCCAACATCCACATGAACACCGGGGAAGGGCACCAGGTGTGGTTACCACCGTGGTC CCGACCTCGGTCAAGGGTACGTTCAGTTCACCTGCTCCATCTTTGGGAATTTTGGATTGG GAAAATGATTTTGATTCGGGAGAGCGTAGGTTTAACCATAGAGTCCCTAAGTTAGATTTC CCAAAATTTGATGGTTCAGATCCACATGATTGGAGAATGAAGTGTGAGCATTACTTTGAT GTGAATAACACTTATCCAGGGTTGTGGGTTAGAGTCTCTATCATTTACTTTTCTGGGAGG GCTGCTTCGTGGCTGAGATCAACTAGAGCTCACTTGCGGTTCCCTAATTGGGAGGATTTT TGCGCTGCAGTATCTGATAAGTTTGATAGAGACCAGCATGATTCGCTAATTAGACAGATG GATCAAATTAAACAGACGGGTTCGGTTTGGGAGTATTATGAACGATTCGATGAATTGATG AATCAATTGCTAGTTTATGATCCTGGGGTAAATATGTGTTACTTGACACATAGATTTATT GATGGGTTGCGTCGGGAGATTAGAAATGCTGTTTTACTTCAGAGACCCAAGAATCTCGAG TCTGCTCTGGCTGTTGCTTCCTTGCAGGAGGAAGTGTTGGAATCATCTGACTCCACACCG GTGAAGGAGGGCAAGAAGTTTGAGAGTTCTGGGCAGCACAAGACTGGTGGAAATTTTAAG GGAGCTTTTCCTTTACCATTGCCTCCTGGTCGTCATTTGGGGGTAATTCAGAGTGCAAGA GTGGATGAGAAGAAGGAAGGGGAAATTAAAAGATTGTCTGCATCTTCAGAGAAAGTGTCA GCTCTTAAAGCACAGCGTCGGGCACAAGGATTATGTTACATATGTGCTGAGAAATGGTCT CCCACTCATAAGTGTGCTAACACTGTGCAATTGCATGCAGTTCAGGAGCTGTTTTCTGTT TTGCATGAAGCTTGTGATGAGGCAGTTTGCAATCCTGAGAATTCTGTTTTATCGGACAGT CAGGTGTTGATGGCAATCTCTGTACATGCAGTTCAAGGATCTGAAGCTAGTGGATGCATG AGGATGTTGGGTCAGATTCAAGGCAAGGACGTTTTTATTTTGGTAGATTCTGGTAGCACT GCAAGTTTCATTAGTGCTCGAGTGGCAGAAGGGTTATCGGAACTTTCTCAGATTGCTACT AATTTGCAAGTGAAGGTGGCTGATGGAGCTACTTTGCACTGTCAGTCTGAAATTCCGGCC TGTGAATGGAGCACTCAAGGACAGAAATTTTGCACTACTCTCAAGATATTACCATTGGGA AATTATGACATGATATTAGGAATGGACTGGCTAATGCAGCACAGCCCAATGACTGTGAAT TGGGTTACTAAATCTCTCACAATTGAAGGCAGGAATCCAGTTGTTACTTTGCAGGGAATT TTGTCAAACACTGCACAGTGCGGACTTATTCCTTCCAAATAG

Peptide Sequence

PEP ID	Os02t0566300-03
PEP Infomation	pep chromosome:IRGSP-1.0:2:21519652:21522734:1 gene:Os02g0566300 transcript:Os02t0566300-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0566300-01);Retrotransposon gag protein domain containing protein. (Os02t0566300-02);Peptidase aspartic, catalytic domain containing protein. (Os02t0566300-03)
Sequence	MTIWYQSIDPGEATLYISPSAAGRSDGEAEYRLWQGLNGDSGVACLAESGARRDATAVNK LDQGVTNWRPQVEAAVKELREEVGDIRQQMDLLGKSQSAPPATSSPRVPLTDEERKAPLL PTPPASRVAAAGDSGDKWASGRQHPHEHRGRAPGVVTTVVPTSVKGTFSSPAPSLGILDW ENDFDSGERRFNHRVPKLDFPKFDGSDPHDWRMKCEHYFDVNNTYPGLWVRVSIIYFSGR AASWLRSTRAHLRFPNWEDFCAAVSDKFDRDQHDSLIRQMDQIKQTGSVWEYYERFDELM NQLLVYDPGVNMCYLTHRFIDGLRREIRNAVLLQRPKNLESALAVASLQEEVLESSDSTP VKEGKKFESSGQHKTGGNFKGAFPLPLPPGRHLGVIQSARVDEKKEGEIKRLSASSEKVS ALKAQRRAQGLCYICAEKWSPTHKCANTVQLHAVQELFSVLHEACDEAVCNPENSVLSDS QVLMAISVHAVQGSEASGCMRMLGQIQGKDVFILVDSGSTASFISARVAEGLSELSQIAT NLQVKVADGATLHCQSEIPACEWSTQGQKFCTTLKILPLGNYDMILGMDWLMQHSPMTVN WVTKSLTIEGRNPVVTLQGILSNTAQCGLIPSK

Transcript Sequence

Transcript ID	Os02t0566300-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21519652:21522734:1 gene:Os02g0566300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os02t0566300-01);Retrotransposon gag protein domain containing protein. (Os02t0566300-02);Peptidase aspartic, catalytic domain containing protein. (Os02t0566300-03)
Sequence	TGAAAAACATTGTACACAACAATTCCCAATTGATTCAAATCTCTCTTCCTGCTATCTTGT TCTGTTCTTTCTTCCTCCTCAAGCTGCTCTTTCCTCCCTCCAATTCCTCAAATCTCCACG AACTCGCTGAAGAATTAGTGTACTCATGACAATTTGGTATCAGAGCATCGATCCTGGAGA AGCCACGCTATACATCTCGCCTTCAGCTGCAGGTCGAAGCGATGGAGAAGCAGAATATCG ACTTTGGCAAGGTCTTAATGGAGATTCAGGAGTCGCTTGTCTCGCTGAATCGGGCGCAAG GCGAGACGCAACCGCCGTCAACAAGCTGGACCAAGGCGTGACCAACTGGAGACCGCAAGT AGAAGCGGCAGTGAAGGAGTTGCGTGAGGAGGTGGGTGATATCCGCCAGCAAATGGACCT GCTCGGCAAATCGCAGTCCGCGCCGCCGGCGACGTCTTCCCCTCGAGTTCCGTTGACGGA CGAGGAAAGGAAGGCGCCGTTGCTTCCTACGCCACCAGCTTCGCGCGTGGCTGCGGCGGG GGACAGCGGAGACAAGTGGGCCAGTGGCCGCCAACATCCACATGAACACCGGGGAAGGGC ACCAGGTGTGGTTACCACCGTGGTCCCGACCTCGGTCAAGGGTACGTTCAGTTCACCTGC TCCATCTTTGGGAATTTTGGATTGGGAAAATGATTTTGATTCGGGAGAGCGTAGGTTTAA CCATAGAGTCCCTAAGTTAGATTTCCCAAAATTTGATGGTTCAGATCCACATGATTGGAG AATGAAGTGTGAGCATTACTTTGATGTGAATAACACTTATCCAGGGTTGTGGGTTAGAGT CTCTATCATTTACTTTTCTGGGAGGGCTGCTTCGTGGCTGAGATCAACTAGAGCTCACTT GCGGTTCCCTAATTGGGAGGATTTTTGCGCTGCAGTATCTGATAAGTTTGATAGAGACCA GCATGATTCGCTAATTAGACAGATGGATCAAATTAAACAGACGGGTTCGGTTTGGGAGTA TTATGAACGATTCGATGAATTGATGAATCAATTGCTAGTTTATGATCCTGGGGTAAATAT GTGTTACTTGACACATAGATTTATTGATGGGTTGCGTCGGGAGATTAGAAATGCTGTTTT ACTTCAGAGACCCAAGAATCTCGAGTCTGCTCTGGCTGTTGCTTCCTTGCAGGAGGAAGT GTTGGAATCATCTGACTCCACACCGGTGAAGGAGGGCAAGAAGTTTGAGAGTTCTGGGCA GCACAAGACTGGTGGAAATTTTAAGGGAGCTTTTCCTTTACCATTGCCTCCTGGTCGTCA TTTGGGGGTAATTCAGAGTGCAAGAGTGGATGAGAAGAAGGAAGGGGAAATTAAAAGATT GTCTGCATCTTCAGAGAAAGTGTCAGCTCTTAAAGCACAGCGTCGGGCACAAGGATTATG TTACATATGTGCTGAGAAATGGTCTCCCACTCATAAGTGTGCTAACACTGTGCAATTGCA TGCAGTTCAGGAGCTGTTTTCTGTTTTGCATGAAGCTTGTGATGAGGCAGTTTGCAATCC TGAGAATTCTGTTTTATCGGACAGTCAGGTGTTGATGGCAATCTCTGTACATGCAGTTCA AGGATCTGAAGCTAGTGGATGCATGAGGATGTTGGGTCAGATTCAAGGCAAGGACGTTTT TATTTTGGTAGATTCTGGTAGCACTGCAAGTTTCATTAGTGCTCGAGTGGCAGAAGGGTT ATCGGAACTTTCTCAGATTGCTACTAATTTGCAAGTGAAGGTGGCTGATGGAGCTACTTT GCACTGTCAGTCTGAAATTCCGGCCTGTGAATGGAGCACTCAAGGACAGAAATTTTGCAC TACTCTCAAGATATTACCATTGGGAAATTATGACATGATATTAGGAATGGACTGGCTAAT GCAGCACAGCCCAATGACTGTGAATTGGGTTACTAAATCTCTCACAATTGAAGGCAGGAA TCCAGTTGTTACTTTGCAGGGAATTTTGTCAAACACTGCACAGTGCGGACTTATTCCTTC CAAATAGTTGAATGGGTTGAAACATAGACAGGCAGTAGCAAATCTTGTTCAACTGTGTTG TGTTACAGACCTGGAACCTTCAGAAGAATTTCCTCTTGCAGTACAACAGGTGCTAAATAA ATTTGCTTCAGTATTTGAGGAACCTCAGGGTCTGCCACCTGTGAGATCGTTTGATCACAC CATTCCTTTAATCCCTGGAGCAATGCCTGTCAACGTGAGGCCTTACCGTTATACTCCATC CCAGAAAGATGAGATTGAGTCTCAAGTCCAAGAAATGCTGTCTAAGGGATTGATTCAGCC CAGCTCAAGTCCATTCTCTTCACCTGTGCTGTTGGTTAATTTCTTCCTCCTCAAGCTGCT CTTTCCTCCCTCCAATTCCTCAAATATCCACGAACTCGCTGAAGAATTAGTATACTCGTG ACACGCAGTCGAGCCATTCGTCGCCGCCCGCCAGCTGCTCGCTATCGTCACCCAGCGCAG CTTCGGCCCTCACCGCCCGCCGCCGGCCGAAGGGGGAAGAACCGATGAGAAAGGGAGAGA AAGAAAGAAGGAAGAGAGGGAGGAGGAAGAAGGGATTTATGTGGGCCCCACATGTCAGTG GGCCCACAATTTCTTTTTTGAATGACAAATGGGCCCCGCATATATATTTTTAATTCTAAT GCCACTTAAGCGCCATGTCAACGCCACATAGGACGAAGACCTAGTCAATACTGCCACGTA GACGCTATGTCAGCGAAACCATCATCCAAAACCGCCGAGGGAGTCAAATTATACCGGTTT TAATAGTTGAGGGGTCAAGATATCCGGTATTATGGTTTAGAGTCATGGATTAGATTCTGG TCACTTTTAAGGGAGTCAAAGTGAACTTATTCCTAGTTTTTATTAGCTGTATAGCTGGCC ATCTAAGGTGAAATTTTTTGCTTGGAGATTATCACTGAATTCCATCCCAACTGAGAAGGT GCCTAAGCAACGAAATATGAGTACAACTTGTATATGTAAAGTTTGTGGTGCTGCAGAGGA TACTTGGGATCATGCACTTCTTC