Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0565400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21471731:21473822:1 gene:Os02g0565400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA65 description:Pentatricopeptide repeat domain containing protein. (Os02t0565400-01);Pentatricopeptide repeat domain containing protein. (Os02t0565400-02)
Sequence	ATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGCCGCCGCCCGCCATGTCCGGCCTCCTC TCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCCCCGCGCCCAGACCCGCCGCCGCCGCC CCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCGCCGCGGCCCCCAACGCCGTGTCCCAC CGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCCTCCGCTCGCTCGTCCGCCGCGGGGAG CTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGCGGAGGCCCGACGCGGGCACCTGCGCC GCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCACCGCGGAGGCCCGCCGCGTGCTGGCC GCGTGCGGCCCCGACGTCATGGCGTACAACGCCATGGTGGCCGGGTACTGCGGCGCGGGG CAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGATGCCCGTGGAGCCCGACGCCTACACC TACAACACGCTCATCCGAGGCCTCTGCGGACGCGGCCGGACCGCGAACGCGCTGGCGGTG CTCGACGAAATGCTCCGCCGGCGATGTGTGCCGGACGTGGTCACCTACACCATCCTCCTC GAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGGCCATGAAGCTTCTCGACGAGATGCGA GATAAGGGGTGCACCCCGGACATTGTCACCTACAACGTCGTTGTCAATGGAATCTGCCAA GAAGGACGGGTTGACGATGCCATTGAGTTCTTGAAGAACCTCCCGTCATATGGCTGTGAA CCAAACACAGTTAGCTATAACATTGTGTTGAAGGGCCTGTGTACCGCGGAGCGATGGGAG GATGCCGAGGAGCTCATGGGCGAGATGGGCCAGAAGGGTTGCCCTCCAAATGTGGTAACT TTTAACATGCTCATCAGTTTCTTATGCCGGAAAGGATTGGTTGAGCCAGCACTGGAAGTC CTTGAGCAGATCCCCAAGTACGGTTGCACACCTAATTCGTTGAGTTACAACCCGCTTCTC CACGCATTCTGCAAGCAAAAAAAGATGGATAAAGCGATGGCGTTTTTGGATTTGATGGTG TCCAGAGGCTGTTATCCAGACATCGTTTCATACAACACTCTACTTACTGCACTCTGCCGC AGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTCATCAACTCAAGGACAAGGGCTGCGCT CCTGTCTTGATAAGTTATAACACGGTCATTGATGGGCTTACGAAGGCTGGGAAGACAAAG GAAGCACTAGAGCTGCTCAATGAGATGGTCAGCAAAGGGCTCCAACCAGATATTATCACA TACTCGACAATAGCTGCTGGTCTTTGTAGAGAAGATAGAATTGAAGATGCAATTAGGGCA TTTGGTAAAGTGCAAGATATGGGCATAAGGCCCAACACTGTGTTGTACAATGCGATAATT CTTGGGCTTTGCAAAAGGCGTGAAACACACAGTGCCATTGATCTTTTCGCTTACATGATA GGGAATGGCTGCATGCCGAATGAATCAACTTACACCATATTGATTGAAGGCTTGGCTTAT GAGGGATTGATCAAGGAGGCACGGGATTTGCTGGATGAATTATGTTCGAGAGGTGTTGTA AGGAAGAGCTTGATAAATAAGGGAGCCATTAGACTGCTTGATTGA

Peptide Sequence

PEP ID	Os02t0565400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21471731:21473822:1 gene:Os02g0565400 transcript:Os02t0565400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA65 description:Pentatricopeptide repeat domain containing protein. (Os02t0565400-01);Pentatricopeptide repeat domain containing protein. (Os02t0565400-02)
Sequence	MAAPAPTASPPPPPAMSGLLSFASSRPYPPLPAPRPAAAAPRPRLRIAGSAAAAPNAVSH RASSSFSSGDRLRSLVRRGELDEALRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLA ACGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVEPDAYTYNTLIRGLCGRGRTANALAV LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAII LGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV RKSLINKGAIRLLD

Transcript Sequence

Transcript ID	Os02t0565400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21471731:21473822:1 gene:Os02g0565400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA65 description:Pentatricopeptide repeat domain containing protein. (Os02t0565400-01);Pentatricopeptide repeat domain containing protein. (Os02t0565400-02)
Sequence	GTCGTCGCCACTGTCCCCCGTGCCCGATGGCCGCGCCCGCGCCCACAGCTTCGCCGCCGC CGCCGCCCGCCATGTCCGGCCTCCTCTCCTTCGCCTCGTCCCGCCCCTACCCTCCCCTCC CCGCGCCCAGACCCGCCGCCGCCGCCCCCAGGCCGCGCCTCCGCATAGCGGGTTCCGCCG CCGCGGCCCCCAACGCCGTGTCCCACCGGGCATCCTCCTCCTTCTCCTCCGGAGACCGCC TCCGCTCGCTCGTCCGCCGCGGGGAGCTCGACGAGGCGCTCCGCCTCGTCGGGTCCGCGC GGAGGCCCGACGCGGGCACCTGCGCCGCGCTCATCAAGAAGCTCAGCGCGTCGGGGCGCA CCGCGGAGGCCCGCCGCGTGCTGGCCGCGTGCGGCCCCGACGTCATGGCGTACAACGCCA TGGTGGCCGGGTACTGCGGCGCGGGGCAGCTCGACGCCGCGCGGCGGCTCGTCGCGGAGA TGCCCGTGGAGCCCGACGCCTACACCTACAACACGCTCATCCGAGGCCTCTGCGGACGCG GCCGGACCGCGAACGCGCTGGCGGTGCTCGACGAAATGCTCCGCCGGCGATGTGTGCCGG ACGTGGTCACCTACACCATCCTCCTCGAGGCCACGTGCAAGAGGAGCGGGTACAAGCAGG CCATGAAGCTTCTCGACGAGATGCGAGATAAGGGGTGCACCCCGGACATTGTCACCTACA ACGTCGTTGTCAATGGAATCTGCCAAGAAGGACGGGTTGACGATGCCATTGAGTTCTTGA AGAACCTCCCGTCATATGGCTGTGAACCAAACACAGTTAGCTATAACATTGTGTTGAAGG GCCTGTGTACCGCGGAGCGATGGGAGGATGCCGAGGAGCTCATGGGCGAGATGGGCCAGA AGGGTTGCCCTCCAAATGTGGTAACTTTTAACATGCTCATCAGTTTCTTATGCCGGAAAG GATTGGTTGAGCCAGCACTGGAAGTCCTTGAGCAGATCCCCAAGTACGGTTGCACACCTA ATTCGTTGAGTTACAACCCGCTTCTCCACGCATTCTGCAAGCAAAAAAAGATGGATAAAG CGATGGCGTTTTTGGATTTGATGGTGTCCAGAGGCTGTTATCCAGACATCGTTTCATACA ACACTCTACTTACTGCACTCTGCCGCAGTGGTGAGGTTGACGTCGCTGTTGAATTGCTTC ATCAACTCAAGGACAAGGGCTGCGCTCCTGTCTTGATAAGTTATAACACGGTCATTGATG GGCTTACGAAGGCTGGGAAGACAAAGGAAGCACTAGAGCTGCTCAATGAGATGGTCAGCA AAGGGCTCCAACCAGATATTATCACATACTCGACAATAGCTGCTGGTCTTTGTAGAGAAG ATAGAATTGAAGATGCAATTAGGGCATTTGGTAAAGTGCAAGATATGGGCATAAGGCCCA ACACTGTGTTGTACAATGCGATAATTCTTGGGCTTTGCAAAAGGCGTGAAACACACAGTG CCATTGATCTTTTCGCTTACATGATAGGGAATGGCTGCATGCCGAATGAATCAACTTACA CCATATTGATTGAAGGCTTGGCTTATGAGGGATTGATCAAGGAGGCACGGGATTTGCTGG ATGAATTATGTTCGAGAGGTGTTGTAAGGAAGAGCTTGATAAATAAGGGAGCCATTAGAC TGCTTGATTGAACTATGAATACATATAAGAGGATCAACTGAGTATCGAGGGTCTGAGAAT GAGATTTTGTGCATCTTCGCTCTTCAGCAGGAGAGGAGATTTTACTGGATGTTCACCTAA TTGATGTTGCTTTCTTGACAACATGTGAGTCCTTTCATCCACTTCCCACCTTACAGGCTT ACAGCCCACTTCAGTCTTCGAGTTGCTTGGAATTTCTGCATAACTCTTGTCTTATTTAAC ATACTTTACCTTATTGTTGAACATGGTCTCATGTTTCACATTCTTGTCCTTACATGATAT ATCATACTAGTGTGAGATACATATTAGACCTGTTTTGATTGGGCATTTCTTGCTTCAATA TGCTTTAGCACTTCATATGAACTAGCGGAATGAAGGGATATGCTAAGTGATG