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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0565200-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:21462363:21464473:-1 gene:Os02g0565200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-01);Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-02)
Sequence

ATGGCGACCGACGGCGGCGGCGCCACCCCCTCACCGGCGGCGAAGAAGGCCAACCTCCTC
GACCCCTACTCCATCAAGCATCTCCTCGACGAGACCGTCTCCGAGGTCGCGAAGAGCAAG
GGGTACCCAGAGGACGCGCGGCTGAGCAACCGGAGGCTGGCGGTCGGCGCGGCGGTGATC
GCCGTCGCGCTCCTCGCGCAGTTCTACCCCCGCAAGTTCCCCGAGAACAGGGACGTCCTC
CTCGCCTGCATCGCGCTGTACGCGGCGCTCAACGTGGCGCTGCAGATCGTTACCTACACC
AAGGAGAAGAACGCCATCCTCTTCACGTACCCTCCCGCGGGATCATTTAATAGGACTGGG
CTTGTTATATCTTCAAAGTTACCAAGATTGTCAGACATGTATACCCTCACAATAGCAAGT
GCAGATCCACATTCTAAATCTTCCAGTGAACCAGTCCATTTCACTAAGAGTGTCACAAAA
TGGTTCACCAAGGATGGGGTTCTTGTGGAAGGTTTGTTCTGGAAGGATGTTGAGAAACTG
ATTGATGACTACAACAGTGACCACAGGAGCAAATGA

Peptide Sequence

PEP ID

Os02t0565200-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:21462363:21464473:-1 gene:Os02g0565200 transcript:Os02t0565200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-01);Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-02)
Sequence

MATDGGGATPSPAAKKANLLDPYSIKHLLDETVSEVAKSKGYPEDARLSNRRLAVGAAVI
AVALLAQFYPRKFPENRDVLLACIALYAALNVALQIVTYTKEKNAILFTYPPAGSFNRTG
LVISSKLPRLSDMYTLTIASADPHSKSSSEPVHFTKSVTKWFTKDGVLVEGLFWKDVEKL
IDDYNSDHRSK

Transcript Sequence

Transcript ID

Os02t0565200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21462363:21464473:-1 gene:Os02g0565200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-01);Microsomal signal peptidase 25 kDa subunit family protein. (Os02t0565200-02)
Sequence

TTTCGCCGGCGACGACGCGGATGGCGACCGACGGCGGCGGCGCCACCCCCTCACCGGCGG
CGAAGAAGGCCAACCTCCTCGACCCCTACTCCATCAAGCATCTCCTCGACGAGACCGTCT
CCGAGGTCGCGAAGAGCAAGGGGTACCCAGAGGACGCGCGGCTGAGCAACCGGAGGCTGG
CGGTCGGCGCGGCGGTGATCGCCGTCGCGCTCCTCGCGCAGTTCTACCCCCGCAAGTTCC
CCGAGAACAGGGACGTCCTCCTCGCCTGCATCGCGCTGTACGCGGCGCTCAACGTGGCGC
TGCAGATCGTTACCTACACCAAGGAGAAGAACGCCATCCTCTTCACGTACCCTCCCGCGG
GATCATTTAATAGGACTGGGCTTGTTATATCTTCAAAGTTACCAAGATTGTCAGACATGT
ATACCCTCACAATAGCAAGTGCAGATCCACATTCTAAATCTTCCAGTGAACCAGTCCATT
TCACTAAGAGTGTCACAAAATGGTTCACCAAGGATGGGGTTCTTGTGGAAGGTTTGTTCT
GGAAGGATGTTGAGAAACTGATTGATGACTACAACAGTGACCACAGGAGCAAATGAAAGG
ATAGCTTGTACTTATTGATATCAATATGTCATGAAACAACCAACCATTCACCTACTACAT
CTGTTAGTTTTTGCATATGACTAGCAAGGAATCGCTTTATAAAATCAAATCTTAACTGC