Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0564400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21425672:21431619:1 gene:Os02g0564400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CLPX (Clp protease regulatory subunit X); ATPase. (Os02t0564400-01)
Sequence	ATGTCCGGCCTCCTCCGGTGGAGGCGCCTCGCCGCCGTGGCCACGCGGGCGGCGTCCACC CTGACCGCGCCGGAGTGCTGCTCCCCGGCGGTGGTGGCGCCGCCGCACCGGCGCGTGCAG GAACGGCGCAAGTGGGAGGGCCCCACCTCCTCCTCGTCGTCGTCGTCCGACGAGCACGAG CCGCGGCGCATCCGCGCGGAGGCGCACTGCCCGCGCTGCTCCAAGCACATGGACATCCTC TTCTCCCACCGCGCGCCGCCGTCCTCCTCCGCCGCCGCGGGCGCGGGCGCGGGCGGCGGT GGGTACCAGGCGCTCAACCTCTGCCCCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCAC CTCCTCGCGCCGCTCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTC CCCCACGACGCCGTCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCG TCGTCGCGGGACGACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCG TTCCACCCCAACCTCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGA GGAGGAGGAGGAGCAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGG GGCGGGTCGAACCTCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGAT AAGTATGTGATTGGGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCAT TATAAACGAATATACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTT GATGGAGAAGCTGATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATG GGGCCTACTGGCTCAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTG CCATTTGTAATTGCTGATGCAACAACATTGACACAGGCAAGGTATGTAGGAGAAGATGTA GAATCTATACTATACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAA GGGATGGTGTACATCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATT AGTAGAGATGTCTCCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACA ATTGTCAATGTCCCTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATA GATACAAAGGACATTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATA TCAGAGAGGCGGCAAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGG GCAGGTGGCATCTCAAGTGCTCAAGTGACATCATCCTTGTTGGAATCAGTTGAGAGTGGC GACCTAATAGCATATGGACTTATTCCGGAATTTATTGGACGGTTTCCTATCCTTGTTAGC TTGGCAGCTCTAAACGAGGACCAGCTTGTTCAGGTTCTCATGGAGCCAAAAAATGCTCTG GGTAAACAATTCAAGAAATTATTCAGCATGAATAATGTCAAGCTTCATTTTACAGATGCT GCACTTAGAATAATTGCCAAGAAGGCAATGTCCAAAAATACGGGTGCACGTGGTTTAAGG ACTATCCTTGAGAATATTCTCATGGATGCTATGTACGAGATTCCAGATGCAAAATCTGGT GAGAAGCGAATCGATGCGGTGGTTGTAGATGAAGACGCAGTCGGAGCAGTGGACCAACCT GGCTGCGGAGCTAAGATCCTTTATGGCGATGGTGCTTTTGAACGTTATCTCTCCCAGATA AAGGTAGCAGGGGATGCAGCGGGAAGCGAAGCGGATGGAGAAGCCGAGCTTTCCTCTTCA AGAGCCATGGGGATGTGA

Peptide Sequence

PEP ID	Os02t0564400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21425672:21431619:1 gene:Os02g0564400 transcript:Os02t0564400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CLPX (Clp protease regulatory subunit X); ATPase. (Os02t0564400-01)
Sequence	MSGLLRWRRLAAVATRAASTLTAPECCSPAVVAPPHRRVQERRKWEGPTSSSSSSSDEHE PRRIRAEAHCPRCSKHMDILFSHRAPPSSSAAAGAGAGGGGYQALNLCPNCRSAYFFRPH LLAPLQGTFVEIGRVRADLLPHDAVRARGASFWEAIRGSSSSRDDGDGGGVAVHVPPGPP FHPNLNVVRVAGGGGGGGGGGGGGAGGGGGGEEGAGKDGWGGSNLGKDLPTPKEICQGLD KYVIGQDRAKKVLSVAVYNHYKRIYHKSLQKGSGADLGGFDGEADDDDGVELEKSNVLLM GPTGSGKTLLAKTLARFVNVPFVIADATTLTQARYVGEDVESILYKLLAVADFNVQAAQQ GMVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQI DTKDILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGGISSAQVTSSLLESVESG DLIAYGLIPEFIGRFPILVSLAALNEDQLVQVLMEPKNALGKQFKKLFSMNNVKLHFTDA ALRIIAKKAMSKNTGARGLRTILENILMDAMYEIPDAKSGEKRIDAVVVDEDAVGAVDQP GCGAKILYGDGAFERYLSQIKVAGDAAGSEADGEAELSSSRAMGM

Transcript Sequence

Transcript ID	Os02t0564400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21425672:21431619:1 gene:Os02g0564400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to CLPX (Clp protease regulatory subunit X); ATPase. (Os02t0564400-01)
Sequence	AGACTCCACTTCCCCCAATCCGCGCGAGCTCAACCTCCTCCTCCGCCATGTCCGGCCTCC TCCGGTGGAGGCGCCTCGCCGCCGTGGCCACGCGGGCGGCGTCCACCCTGACCGCGCCGG AGTGCTGCTCCCCGGCGGTGGTGGCGCCGCCGCACCGGCGCGTGCAGGAACGGCGCAAGT GGGAGGGCCCCACCTCCTCCTCGTCGTCGTCGTCCGACGAGCACGAGCCGCGGCGCATCC GCGCGGAGGCGCACTGCCCGCGCTGCTCCAAGCACATGGACATCCTCTTCTCCCACCGCG CGCCGCCGTCCTCCTCCGCCGCCGCGGGCGCGGGCGCGGGCGGCGGTGGGTACCAGGCGC TCAACCTCTGCCCCAACTGCCGCAGCGCCTACTTCTTCCGCCCCCACCTCCTCGCGCCGC TCCAGGGCACCTTCGTCGAGATCGGCCGCGTCCGCGCCGACCTGCTCCCCCACGACGCCG TCAGGGCCAGGGGCGCTTCCTTCTGGGAGGCCATCCGTGGGAGCTCGTCGTCGCGGGACG ACGGGGACGGCGGCGGCGTGGCCGTGCACGTGCCGCCCGGCCCGCCGTTCCACCCCAACC TCAACGTCGTCCGCGTCGCCGGAGGCGGTGGCGGTGGCGGCGGCGGAGGAGGAGGAGGAG CAGGTGGTGGCGGTGGTGGTGAGGAGGGTGCGGGGAAGGACGGGTGGGGCGGGTCGAACC TCGGGAAGGATTTGCCTACGCCCAAGGAGATATGTCAGGGGCTCGATAAGTATGTGATTG GGCAGGACAGAGCCAAGAAGGTGCTATCTGTTGCAGTGTACAATCATTATAAACGAATAT ACCATAAATCATTACAAAAAGGGTCTGGAGCAGATTTGGGTGGTTTTGATGGAGAAGCTG ATGATGACGATGGTGTTGAACTAGAGAAAAGCAATGTTCTATTAATGGGGCCTACTGGCT CAGGTAAAACTCTACTTGCTAAGACATTAGCTCGCTTTGTGAATGTGCCATTTGTAATTG CTGATGCAACAACATTGACACAGGCAAGGTATGTAGGAGAAGATGTAGAATCTATACTAT ACAAGTTACTGGCGGTGGCAGATTTTAACGTGCAAGCAGCACAACAAGGGATGGTGTACA TCGATGAAGTTGATAAGATCACAAAGAAGGCTGAGAGCCTTAACATTAGTAGAGATGTCT CCGGTGAAGGTGTCCAGCAGGCTTTGTTGAAAATGCTGGAAGGCACAATTGTCAATGTCC CTGAGAAAGGAGCAAGGAAGCATCCTCGCGGTGATAATATACAGATAGATACAAAGGACA TTCTTTTTATTTGTGGTGGTGCTTTTATTGACTTGGAGAAAACTATATCAGAGAGGCGGC AAGATTCTTCTATTGGCTTTGGGGCACCTGTCCGTGCTAACATGAGGGCAGGTGGCATCT CAAGTGCTCAAGTGACATCATCCTTGTTGGAATCAGTTGAGAGTGGCGACCTAATAGCAT ATGGACTTATTCCGGAATTTATTGGACGGTTTCCTATCCTTGTTAGCTTGGCAGCTCTAA ACGAGGACCAGCTTGTTCAGGTTCTCATGGAGCCAAAAAATGCTCTGGGTAAACAATTCA AGAAATTATTCAGCATGAATAATGTCAAGCTTCATTTTACAGATGCTGCACTTAGAATAA TTGCCAAGAAGGCAATGTCCAAAAATACGGGTGCACGTGGTTTAAGGACTATCCTTGAGA ATATTCTCATGGATGCTATGTACGAGATTCCAGATGCAAAATCTGGTGAGAAGCGAATCG ATGCGGTGGTTGTAGATGAAGACGCAGTCGGAGCAGTGGACCAACCTGGCTGCGGAGCTA AGATCCTTTATGGCGATGGTGCTTTTGAACGTTATCTCTCCCAGATAAAGGTAGCAGGGG ATGCAGCGGGAAGCGAAGCGGATGGAGAAGCCGAGCTTTCCTCTTCAAGAGCCATGGGGA TGTGATTTATTGGTTCTCACATCTCCTGTATAACCCTGTAAAATCTAATCCCAGATGTAA TAATGTAAGTATTAGCCTTGTAAAGGAATATTGTGTGTAGTGTCTATTGCTAGTTAAAAA GGCTCCAGCGCAATGTTCAGCACCCCCACGCTCTTTACTTAATTTGCAGCAGGGTTTGGA AAGAGTATATAGCTCAGGGGATATTTATGGGTGTCGTACAGACAACCCTGGTTGTCATGA AAATGTAATGTCCAAGAATTGTGATGACTGCTGATGGATGTAAAAAAAAAACTTAGAAAC AATGAAACGCATTGAAAGGGGGAAGGAAATGCCAATAATGCTGTTG