Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0561800-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21295214:21296474:-1 gene:Os02g0561800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELICITOR 5, E3 ubiquitin-protein ligase EL5 description:RING-H2 type E3 ubiquitin ligase, Root development, Maintenance of cell viability after the initiation of root primordial formation, Defense response (Os02t0561800-01)
Sequence	ATGGTGCGGGGTGTCGAGCAGGGCGGCCCCGCCATGGACGAGTCTTCGTCGTCGTCGTCG CCGTCGCCGGTGTCCGCGCCTGCAGGGCAGGCAGCCATGACGGCCGGCGGCATCGCCACC GTGGCGGCCGTGCTCATCGTCTTCGCGGCGCTCACGCTCGCCTTCGTCCTGCTCCAGTGC TACTGCGACGAGCGGCGCCGCGCCGTGACGACGACGTCGACGAGCGGGCGCGGGCGGCGG CCGCGGCCGCGGCGGCGCTCTGGGAGCGGCGGGGACGGTGGAACGGGAGGAGGGGTCGAC CCGGAGGTGCTCCGGTCGCTGCCGGTCACGGTGTACAGCCGCAGCACGGCGGCGGCGGCG GCGAAGGAGGAGGAGGAGGAGGACGACGACGGCGTCGAGTGCGCGGTGTGCCTCGCGGAG CTCGAGGACGGCGAGGAGGCCAGGTTCCTCCCCCGGTGCGGCCACGGCTTCCACGCCGAG TGCGTCGACATGTGGCTCGGCTCCCACTCCACCTGCCCGCTCTGCCGCCTCACCGTCGTC GTGCCGCCGCCGCCTCTTCCTCCCGTCCCGCCGGAGCCGCCGGCGAGCTACACCGTGAGC CTCCCGGCGAGCGTCCTGCTCGGCCTGTCCGACCATGGCGCCGGCGCGGTGACCATGACA GCGGAGGGCCGCAGCACGCTGGTGATCGAGATCCCCGAATCCGCGGCTTCGACGACCCCG CGCGACGCGGCGGCGAGGTCGTCGCCGAGCTTGGCGCGGCTGAGGTCACTGAGAAGGCTC TGGAGCTTCGGGCGGCAAGGGGCGGCGGGGTCGACGTCGTCATGCTCCTGCGCCACCGGA GGAGACAACGACGACGGCGACGTCGAGCACGGTGTCAGCGTCACCGTCGCCATCCGCGCC GTGGAGGCGGCAACGCCGGCACGGCCACCGGAGGCCGAGGCCGGTGCAAGAACCGCCGCC GCGCATGTCCGGAATTGA

Peptide Sequence

PEP ID	Os02t0561800-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21295214:21296474:-1 gene:Os02g0561800 transcript:Os02t0561800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELICITOR 5, E3 ubiquitin-protein ligase EL5 description:RING-H2 type E3 ubiquitin ligase, Root development, Maintenance of cell viability after the initiation of root primordial formation, Defense response (Os02t0561800-01)
Sequence	MVRGVEQGGPAMDESSSSSSPSPVSAPAGQAAMTAGGIATVAAVLIVFAALTLAFVLLQC YCDERRRAVTTTSTSGRGRRPRPRRRSGSGGDGGTGGGVDPEVLRSLPVTVYSRSTAAAA AKEEEEEDDDGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV VPPPPLPPVPPEPPASYTVSLPASVLLGLSDHGAGAVTMTAEGRSTLVIEIPESAASTTP RDAAARSSPSLARLRSLRRLWSFGRQGAAGSTSSCSCATGGDNDDGDVEHGVSVTVAIRA VEAATPARPPEAEAGARTAAAHVRN

Transcript Sequence

Transcript ID	Os02t0561800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21295214:21296474:-1 gene:Os02g0561800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ELICITOR 5, E3 ubiquitin-protein ligase EL5 description:RING-H2 type E3 ubiquitin ligase, Root development, Maintenance of cell viability after the initiation of root primordial formation, Defense response (Os02t0561800-01)
Sequence	GGTCACATATGCATGTGACGGTCGATTATTATGGTGCGGGGTGTCGAGCAGGGCGGCCCC GCCATGGACGAGTCTTCGTCGTCGTCGTCGCCGTCGCCGGTGTCCGCGCCTGCAGGGCAG GCAGCCATGACGGCCGGCGGCATCGCCACCGTGGCGGCCGTGCTCATCGTCTTCGCGGCG CTCACGCTCGCCTTCGTCCTGCTCCAGTGCTACTGCGACGAGCGGCGCCGCGCCGTGACG ACGACGTCGACGAGCGGGCGCGGGCGGCGGCCGCGGCCGCGGCGGCGCTCTGGGAGCGGC GGGGACGGTGGAACGGGAGGAGGGGTCGACCCGGAGGTGCTCCGGTCGCTGCCGGTCACG GTGTACAGCCGCAGCACGGCGGCGGCGGCGGCGAAGGAGGAGGAGGAGGAGGACGACGAC GGCGTCGAGTGCGCGGTGTGCCTCGCGGAGCTCGAGGACGGCGAGGAGGCCAGGTTCCTC CCCCGGTGCGGCCACGGCTTCCACGCCGAGTGCGTCGACATGTGGCTCGGCTCCCACTCC ACCTGCCCGCTCTGCCGCCTCACCGTCGTCGTGCCGCCGCCGCCTCTTCCTCCCGTCCCG CCGGAGCCGCCGGCGAGCTACACCGTGAGCCTCCCGGCGAGCGTCCTGCTCGGCCTGTCC GACCATGGCGCCGGCGCGGTGACCATGACAGCGGAGGGCCGCAGCACGCTGGTGATCGAG ATCCCCGAATCCGCGGCTTCGACGACCCCGCGCGACGCGGCGGCGAGGTCGTCGCCGAGC TTGGCGCGGCTGAGGTCACTGAGAAGGCTCTGGAGCTTCGGGCGGCAAGGGGCGGCGGGG TCGACGTCGTCATGCTCCTGCGCCACCGGAGGAGACAACGACGACGGCGACGTCGAGCAC GGTGTCAGCGTCACCGTCGCCATCCGCGCCGTGGAGGCGGCAACGCCGGCACGGCCACCG GAGGCCGAGGCCGGTGCAAGAACCGCCGCCGCGCATGTCCGGAATTGACGGCGGCGAGGT CGTCAAGTATTATAAGGCGATCTCCCTGTACATATCGGTAGAACCGAACTGGAATCGCCA TTAATTCCTACGATTTTAGAAAATATCAATTTCATTTTTAAGATTAGAAACATTTAAGTA GAAATTATTTGTTCATCAGTCAAGTAGCAAAGAGAAATGTATGGATGGCAGTGAGAAGCA TCCCTCTCCGTATGTTCCATGAATTGTGAGCCGAATATGAATTTCAGCCAAATCTTGACT A