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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0558300-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21165035:21165686:1 gene:Os02g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ThiamineS domain containing protein. (Os02t0558300-01)
Sequence

ATCTGCAGCAGCGGAGCAGATCGGCATCCGCCGCTTCCTCCTCCTCCGGCGATGGCGCTG
GATCCCAAAGCCAATCACGCTGCCGCTGCTGCTGCTTCCGCCGACAACCCCACGGCGGCG
GCGGCGAAGGCGAAGGTGAAGGTGAAGGTGCTCTTCTTCGCCCGCGCGCGGGACCTGACG
GGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAGACTGCCTCGCC
CGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTC
AACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATC
CCGCCCATCAGCGGCGGCTGA

Peptide Sequence

PEP ID

Os02t0558300-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21165035:21165686:1 gene:Os02g0558300 transcript:Os02t0558300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ThiamineS domain containing protein. (Os02t0558300-01)
Sequence

ICSSGADRHPPLPPPPAMALDPKANHAAAAAASADNPTAAAAKAKVKVKVLFFARARDLT
GVTEAPVEVPAGSTAGDCLARVLAAFPRLEEIRRSMVLALNEEYAPEDAAVGDGDELAII
PPISGG

Transcript Sequence

Transcript ID

Os02t0558300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21165035:21165686:1 gene:Os02g0558300 gene_biotype:protein_coding transcript_biotype:protein_coding description:ThiamineS domain containing protein. (Os02t0558300-01)
Sequence

ATCTGCAGCAGCGGAGCAGATCGGCATCCGCCGCTTCCTCCTCCTCCGGCGATGGCGCTG
GATCCCAAAGCCAATCACGCTGCCGCTGCTGCTGCTTCCGCCGACAACCCCACGGCGGCG
GCGGCGAAGGCGAAGGTGAAGGTGAAGGTGCTCTTCTTCGCCCGCGCGCGGGACCTGACG
GGCGTGACGGAGGCCCCGGTGGAGGTGCCGGCAGGGAGCACGGCGGGAGACTGCCTCGCC
CGGGTGCTGGCCGCCTTCCCCAGGCTGGAGGAGATCCGGCGATCCATGGTGCTCGCGCTC
AACGAGGAGTACGCGCCCGAGGACGCCGCCGTCGGGGACGGCGACGAGCTCGCCATCATC
CCGCCCATCAGCGGCGGCTGACAATCTTTCCACTTCTCCACCACCCTCCCCCCAATTCGA
AGACACGGGGGCGCAAAGAGAGAAGAAACCACCGGTTCTTTCTTTTGCTTTCCTCTTCTT
TCTACTTGTTTCCTGATACAATTTCAATCATACAATATACGCAAGTTTGAGTAATAAGCA
TCGCCTGTTTTCGCGATGATAATTGTTACTTGGCATCGTTGTCCTTCAATCATGTTGATG
AATCTTGAATCACATTTCGATTTGAAGTGATATATGTGTGTGCTTCTTGTCT