Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0558100-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:21150709:21161368:-1 gene:Os02g0558100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 3 description:Similar to Chloride channel (Fragment). (Os02t0558100-01);Chloride channel (Fragment). (Os02t0558100-02);Similar to Chloride channel (Fragment). (Os02t0558100-03)
Sequence	ATGGAGGGGCAGTCGCAGCACCGGGCGCCGGAGAGGGAGGGGAGCCACAACTACGACATC GAGAGCACGGACGGGTCCGGCGGGCTGTGGCGGCGGAACGGCTCGTCGTCGGGGGCGCTG CTCCGCTACAACGACAGCGGCGGCGGCCGCAGCGGGAGCGCCGGGGAGCCGCTGCTGCGG AAGCGCACCATGAACACCACCTCCCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCATC GAGAGCCTCGACTACGAAGTTGTTGAGAACGACCTTTTCAAGCAAGACTGGCGATCAAGA AAGAAGAAGCAGATATTTCAGTACATTGTTCTGAAGTGGACCTTGGTGCTTCTTATTGGC CTGTTGACTGGACTTGTTGGCTTCTTCAACAATCTTGCAGTTGAAAACATTGCTGGATTC AAACTGTTGCTCACGGGTAATCTTATGCTAAAGGAAAGGTATTTAACTGCATTTTTCGCT TATGGAGGTTGCAATTTGGTCTTAGCAGCTGCAGCGGCAGCAATATGTGCTTACATTGCA CCTGCTGCTGCTGGGTCTGGTATTCCCGAAGTTAAAGCATATCTTAATGGAGTTGATGCA TATTCAATATTGGCCCCCAGTACGCTCTTTGTGAAGATATTTGGTTCAATACTTGGAGTT TCAGCTGGATTTGTACTTGGAAAGGAAGGTCCTATGGTACATACAGGGGCATGTATTGCC AACTTGCTTGGTCAGGGAGGATCCCGCAAGTACCGGCTTACATGTAATTGGCTAAGATAT TTTAAGAATGACAGGGATAGGCGGGATTTAATTACATGCGGGTCTGCAGCTGGAGTGGCA GCTGCCTTCCGTGCTCCTGTTGGTGGTGTCCTATTTGCTCTTGAGGAAGCAGCATCATGG TGGCGAAGTGCTCTTTTGTGGAGGGCGTTCTTTACAACGGCTGTTGTTGCTGTCGTGTTG AGATCTCTTATTGAGTTCTGTCGTAGTGGAAAATGCGGTCTCTTTGGGCAAGGTGGATTA ATTATGTTCGATCTCAGTTCAACTGTTGCAACCTACAGTACTCCAGATCTAATAGCAATA ATTATCCTTGGAATAATTGGTGGAATCTTTGGAGGCCTTTTTAATTTTCTCTTGGACAAG GTTCTCCGTGTTTACAGTATCATAAACGAGAGAGGTGCTCCATTCAAGATCCTTCTCACT ATAACAATATCAATTATCACATCAATGTGCTCTTATGGTCTCCCTTGGCTTGCTGCGTGC ACTCCATGTCCCGTGGATGCTGTGGAGCAATGTCCTACCATTGGACGCTCTGGTAACTTC AAGAACTTTCAATGTCCACCAGGGCATTACAATGATCTTGCATCACTCTTTTTCAATACA AATGATGATGCCATCCGCAACCTCTTTAGCAATGGGACTGAATCTGAGTTCCACATGTCC ACCCTTTTCATCTTTTTCACTGCTGTGTACTGCCTTGGAATTCTGACGTACGGTGTTGCC GTCCCATCCGGTCTCTTCATCCCTGTTATTCTCGCTGGTGCAACATACGGGCGCATAGTG GGGACACTTCTTGGATCCATATCCGACCTTGATCCTGGTCTTTTTGCCCTTCTTGGTGCA GCATCTTTTCTTGGTGGAACAATGAGAATGACCGTGTCAGTCTGCGTGATCCTTCTAGAG CTCACCAACGACCTGGCCATGCTCCCTCTGGTCATGCTTGTTCTTCTCATATCGAAGACT ATAGCAGATAACTTTAATAAAGGAGTTTATGATCAGATAGTGGTAATGAAAGGCTTGCCA TACATGGAGGCTCATGCTGAACCATACATGAGGCACTTGGTTGCTGGCGATGTTGTGTCT GGCCCACTTATTACGTTTTCAGGTGTCGAGAAGGTGGGAAACATTGTCCATGCGTTAAGG TTCACAGGCCACAATGGATTCCCAGTGGTTGATGAGCCACCTCTAACGGAAGCACCTGAA TTGGTCGGGCTCGTGACAAGGTCTCATCTGTTGGTTTTGCTGAATGGCAAGATGTTCATG AAAGACCAGCTGAAAACTAGTGGTAGCTTTGTCCTTCAAAGATTCGGTGCCTTTGATTTT GCCAAGCCAGGGTCAGGGAAAGGCTTGAAAATTCAGGACCTGGACTTCACTGATGAGGAG ATGGAAATGTATGTGGATCTCCATCCCGTTACAAACACCTCACCTTATACGGTGGTTGAG ACAATGTCACTCGCAAAAGCTGCAATCCTATTCCGTGCACTAGGATTGAGGCACCTTTTG GTTGTGCCAAAGACACCAGATAGGCCACCCATTGTCGGAATTCTCACGAGGCATGATTTC GTCGAAGAACATATCCACGGGCTGTTCCCAAATCTCAATCCTCACAAGTTCCACTCGACA TCGATGGGAGGCTGA

Peptide Sequence

PEP ID	Os02t0558100-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:21150709:21161368:-1 gene:Os02g0558100 transcript:Os02t0558100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 3 description:Similar to Chloride channel (Fragment). (Os02t0558100-01);Chloride channel (Fragment). (Os02t0558100-02);Similar to Chloride channel (Fragment). (Os02t0558100-03)
Sequence	MEGQSQHRAPEREGSHNYDIESTDGSGGLWRRNGSSSGALLRYNDSGGGRSGSAGEPLLR KRTMNTTSQIAIVGANVCPIESLDYEVVENDLFKQDWRSRKKKQIFQYIVLKWTLVLLIG LLTGLVGFFNNLAVENIAGFKLLLTGNLMLKERYLTAFFAYGGCNLVLAAAAAAICAYIA PAAAGSGIPEVKAYLNGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIA NLLGQGGSRKYRLTCNWLRYFKNDRDRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASW WRSALLWRAFFTTAVVAVVLRSLIEFCRSGKCGLFGQGGLIMFDLSSTVATYSTPDLIAI IILGIIGGIFGGLFNFLLDKVLRVYSIINERGAPFKILLTITISIITSMCSYGLPWLAAC TPCPVDAVEQCPTIGRSGNFKNFQCPPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMS TLFIFFTAVYCLGILTYGVAVPSGLFIPVILAGATYGRIVGTLLGSISDLDPGLFALLGA ASFLGGTMRMTVSVCVILLELTNDLAMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGLP YMEAHAEPYMRHLVAGDVVSGPLITFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPE LVGLVTRSHLLVLLNGKMFMKDQLKTSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEE MEMYVDLHPVTNTSPYTVVETMSLAKAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDF VEEHIHGLFPNLNPHKFHSTSMGG

Transcript Sequence

Transcript ID	Os02t0558100-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21150709:21161368:-1 gene:Os02g0558100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYSTATHIONINE B-SYNTHASE DOMAIN CONTAINING CHLORIDE CHANNEL PROTEIN 3 description:Similar to Chloride channel (Fragment). (Os02t0558100-01);Chloride channel (Fragment). (Os02t0558100-02);Similar to Chloride channel (Fragment). (Os02t0558100-03)
Sequence	GAGAGAGAGATTTAGAGTTTCAGAGTTTCAGAGAGGCAGTAGAAGAGAAAGGAGGATCAT CATCTTGATCTGAATCTCGGGAAGTTTTTACTGTGGCCTGATGATCTGAGTTCAACCAAG GCTCGAATTTTGTAAGAGAAGCCAAGCAAAGAAAGTCTCGCGGAGAAGAGAAGAAGAAGA AGAAGAAGAAGAAGAAGAAGAGCTCTCTGACCAAAGCGGCGGCGGCGGCGAGCGGCGGCG GAATGGAGGGGCAGTCGCAGCACCGGGCGCCGGAGAGGGAGGGGAGCCACAACTACGACA TCGAGAGCACGGACGGGTCCGGCGGGCTGTGGCGGCGGAACGGCTCGTCGTCGGGGGCGC TGCTCCGCTACAACGACAGCGGCGGCGGCCGCAGCGGGAGCGCCGGGGAGCCGCTGCTGC GGAAGCGCACCATGAACACCACCTCCCAGATCGCCATCGTCGGCGCCAACGTCTGCCCCA TCGAGAGCCTCGACTACGAAGTTGTTGAGAACGACCTTTTCAAGCAAGACTGGCGATCAA GAAAGAAGAAGCAGATATTTCAGTACATTGTTCTGAAGTGGACCTTGGTGCTTCTTATTG GCCTGTTGACTGGACTTGTTGGCTTCTTCAACAATCTTGCAGTTGAAAACATTGCTGGAT TCAAACTGTTGCTCACGGGTAATCTTATGCTAAAGGAAAGGTATTTAACTGCATTTTTCG CTTATGGAGGTTGCAATTTGGTCTTAGCAGCTGCAGCGGCAGCAATATGTGCTTACATTG CACCTGCTGCTGCTGGGTCTGGTATTCCCGAAGTTAAAGCATATCTTAATGGAGTTGATG CATATTCAATATTGGCCCCCAGTACGCTCTTTGTGAAGATATTTGGTTCAATACTTGGAG TTTCAGCTGGATTTGTACTTGGAAAGGAAGGTCCTATGGTACATACAGGGGCATGTATTG CCAACTTGCTTGGTCAGGGAGGATCCCGCAAGTACCGGCTTACATGTAATTGGCTAAGAT ATTTTAAGAATGACAGGGATAGGCGGGATTTAATTACATGCGGGTCTGCAGCTGGAGTGG CAGCTGCCTTCCGTGCTCCTGTTGGTGGTGTCCTATTTGCTCTTGAGGAAGCAGCATCAT GGTGGCGAAGTGCTCTTTTGTGGAGGGCGTTCTTTACAACGGCTGTTGTTGCTGTCGTGT TGAGATCTCTTATTGAGTTCTGTCGTAGTGGAAAATGCGGTCTCTTTGGGCAAGGTGGAT TAATTATGTTCGATCTCAGTTCAACTGTTGCAACCTACAGTACTCCAGATCTAATAGCAA TAATTATCCTTGGAATAATTGGTGGAATCTTTGGAGGCCTTTTTAATTTTCTCTTGGACA AGGTTCTCCGTGTTTACAGTATCATAAACGAGAGAGGTGCTCCATTCAAGATCCTTCTCA CTATAACAATATCAATTATCACATCAATGTGCTCTTATGGTCTCCCTTGGCTTGCTGCGT GCACTCCATGTCCCGTGGATGCTGTGGAGCAATGTCCTACCATTGGACGCTCTGGTAACT TCAAGAACTTTCAATGTCCACCAGGGCATTACAATGATCTTGCATCACTCTTTTTCAATA CAAATGATGATGCCATCCGCAACCTCTTTAGCAATGGGACTGAATCTGAGTTCCACATGT CCACCCTTTTCATCTTTTTCACTGCTGTGTACTGCCTTGGAATTCTGACGTACGGTGTTG CCGTCCCATCCGGTCTCTTCATCCCTGTTATTCTCGCTGGTGCAACATACGGGCGCATAG TGGGGACACTTCTTGGATCCATATCCGACCTTGATCCTGGTCTTTTTGCCCTTCTTGGTG CAGCATCTTTTCTTGGTGGAACAATGAGAATGACCGTGTCAGTCTGCGTGATCCTTCTAG AGCTCACCAACGACCTGGCCATGCTCCCTCTGGTCATGCTTGTTCTTCTCATATCGAAGA CTATAGCAGATAACTTTAATAAAGGAGTTTATGATCAGATAGTGGTAATGAAAGGCTTGC CATACATGGAGGCTCATGCTGAACCATACATGAGGCACTTGGTTGCTGGCGATGTTGTGT CTGGCCCACTTATTACGTTTTCAGGTGTCGAGAAGGTGGGAAACATTGTCCATGCGTTAA GGTTCACAGGCCACAATGGATTCCCAGTGGTTGATGAGCCACCTCTAACGGAAGCACCTG AATTGGTCGGGCTCGTGACAAGGTCTCATCTGTTGGTTTTGCTGAATGGCAAGATGTTCA TGAAAGACCAGCTGAAAACTAGTGGTAGCTTTGTCCTTCAAAGATTCGGTGCCTTTGATT TTGCCAAGCCAGGGTCAGGGAAAGGCTTGAAAATTCAGGACCTGGACTTCACTGATGAGG AGATGGAAATGTATGTGGATCTCCATCCCGTTACAAACACCTCACCTTATACGGTGGTTG AGACAATGTCACTCGCAAAAGCTGCAATCCTATTCCGTGCACTAGGATTGAGGCACCTTT TGGTTGTGCCAAAGACACCAGATAGGCCACCCATTGTCGGAATTCTCACGAGGCATGATT TCGTCGAAGAACATATCCACGGGCTGTTCCCAAATCTCAATCCTCACAAGTTCCACTCGA CATCGATGGGAGGCTGATTTTTAAGCGTTTTGCCGCCACTCGTTTTATGTGAAGTATAGG AAGTGTTCATTATATGTAATTTACAAAATTGTGTCTGTCATTTGTTGGAGAGAGCTCATC ATCTGTACATCGGTTGTAGCATATCCTCTTTTACAGGATTCATCTTGTAGCGTATTTTGT CTCAGCTTGCTTATTTTGAGTCTGACAGGAAGCGCTCTGTAAATGTAGAGCAAACATTCG GAACACCGAAATTTTATATCATAAAGTTGTGCTAAGGCATATTTG