Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0557600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21115929:21122111:-1 gene:Os02g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 domain containing protein. (Os02t0557600-01)
Sequence	ATGTTCAAGAAGCATGTTGATGTAAAGGCTCTACAGCGTTTGTCGGGAGCTGACAAAAAG AAGCTCAGAAGAACTGCCAAGGAAAGGTTCCCACAAGCATCTGATGCTGACCTTGATGCC ATCCTTCCTCCCAAGGTTGAGGTAACAGTTGCTAAGTACCCAAATAGGGTTCTTGTATAT GGCATAGAGGGAGAGTTCCCAATGCTTTTCGACATTGATGGAAGAGGCCATGAGCTGTTT CCAACAGTTTATGCACTCTGGAAGGTTCCCGATCTGTTGCCTGCTTTTACACTTAAGGGT GGTGAAGTCTCACGCTTCATACTGGGGGGTGCCGATCTGATGTTTCCTGGTATTAGCATA CCCCCAGAAGGGCTTCCTTCCTTTCAACCTGGCCAGCCATGGTCAGTAAAGGTTCCTGGT AATCCTGCTCCAATTGCTGTTGGGGCCACAACTATGAGCAGTAATGAAGCCTTAAAGGCA GGGTTACGTGGCAAGGCTTTGCGGATTACTCACTACTTTAAGGATTCATTATGGGATTCT GCTGATGGTCGCTATGTTCCAAATGAAGGATTTTATGAGGACATTGTTGTTGAAGATCGT AATTATGCTTCACCGTCTCAACCTGCTGATTCTTCTGAAGATCATGTAGAAGGCATGCAT GACAGTACCATTGAAGGTGAAGAAGCTGCAGTTGATGTTTCTGAGAGCCATACCACAGAT CATGACATCCACGTTGAGGCCATAGAAGATTTAACTGCTGGTGTGAGTGAGGTGAAATTG CCTGAAGATAATGCTACTGAGGAACCAACTGAGGAAAGGGAACATCAGAATTTGTCTACG GAAGAAATTGACTCTCTTTTAGATAAATGTCTTCTGCAAGCTTTACACACGAGTGTAAAA GATAAAGACCTTCCTATTCCTGGAAGTACATTGTGGTCAAATCACATACTCCCCTGCAGA CCTACAGGTGTTACTCTGGATATTAAGAAGTCATCACACAAAAAGCTATCCAAGTGGTTG CAATCAAAATCTTCCGCTGGCCTTATTTCATCAAAAGAAGACAAGCATAAAAAGGAAGTC ATGTTGCTTCGTATCAATCGTGGGCATCCAGATTACATGGCCTTTAAACCAGAAAAGAGG GTACAGGAGCCTGTTGTACAGCATGATAATGTTGTTGCTGAAGGTAGCAGCACGAAGCAA CTGGAAGTAGCAGAAACTTATAAGCCAAGCTCTCATGTTAACCCCATATTTATGGCTGTT GGAGCGGACACGAGCAAGTACTATAGTGCATCAGAGGCATCTGACATAGTCTTCAGGTAC GTTGAAAAGGAAAATTTGGTTAAACAAACAGACAAGGCCAAAGTAGTTTTGGATGTTGCA TTATGCGACGCTCTCTACAAAGGAGCCATCAAAAAGGGTTCAGCATACCCAACCGAGATC CACAAGAGGGACCTGGGGTCAACATTTTTAAACCGAATGCAGATTCACCATAGAGTAGCA AGAGGGAACGAGGTGGTCATTCGCAAGGGCGCCATACGAACCATTCAGATCATGACAGAG AGAAGGCAAGGAAACAAGAAGATGACCCGGCTATCTGGATTGGAATGCTTCTTAATGGAT CCTGACTCGTTAGCTTCTGAGCTGCAGAAGAAGTTTGCTTGCAGCACCACCACAGCTGAG CTTCCAGGTAAGAAAGGGCAACACGAGGTCTTGGTTCAAGGTGGAGTCATCGATGACCTT GCAAAGCACCTTGTTGATCATTACGGTGTTCCGAAGAGGTTTATTGAGGTTCTTGACAAA ACAAAGCGTTAG

Peptide Sequence

PEP ID	Os02t0557600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21115929:21122111:-1 gene:Os02g0557600 transcript:Os02t0557600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 domain containing protein. (Os02t0557600-01)
Sequence	MFKKHVDVKALQRLSGADKKKLRRTAKERFPQASDADLDAILPPKVEVTVAKYPNRVLVY GIEGEFPMLFDIDGRGHELFPTVYALWKVPDLLPAFTLKGGEVSRFILGGADLMFPGISI PPEGLPSFQPGQPWSVKVPGNPAPIAVGATTMSSNEALKAGLRGKALRITHYFKDSLWDS ADGRYVPNEGFYEDIVVEDRNYASPSQPADSSEDHVEGMHDSTIEGEEAAVDVSESHTTD HDIHVEAIEDLTAGVSEVKLPEDNATEEPTEEREHQNLSTEEIDSLLDKCLLQALHTSVK DKDLPIPGSTLWSNHILPCRPTGVTLDIKKSSHKKLSKWLQSKSSAGLISSKEDKHKKEV MLLRINRGHPDYMAFKPEKRVQEPVVQHDNVVAEGSSTKQLEVAETYKPSSHVNPIFMAV GADTSKYYSASEASDIVFRYVEKENLVKQTDKAKVVLDVALCDALYKGAIKKGSAYPTEI HKRDLGSTFLNRMQIHHRVARGNEVVIRKGAIRTIQIMTERRQGNKKMTRLSGLECFLMD PDSLASELQKKFACSTTTAELPGKKGQHEVLVQGGVIDDLAKHLVDHYGVPKRFIEVLDK TKR

Transcript Sequence

Transcript ID	Os02t0557600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21115929:21122111:-1 gene:Os02g0557600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor SUI1 domain containing protein. (Os02t0557600-01)
Sequence	GGGTTCCAGAACCTTCTCGATCCCTCCTCCCCCTCTCCGCCTCCGCCTCCGCCCTCCTCC GCTCCGATCGCCGCCGGCTCGTCGCCGGTTTCATAAGCCATGTTCAAGAAGCATGTTGAT GTAAAGGCTCTACAGCGTTTGTCGGGAGCTGACAAAAAGAAGCTCAGAAGAACTGCCAAG GAAAGGTTCCCACAAGCATCTGATGCTGACCTTGATGCCATCCTTCCTCCCAAGGTTGAG GTAACAGTTGCTAAGTACCCAAATAGGGTTCTTGTATATGGCATAGAGGGAGAGTTCCCA ATGCTTTTCGACATTGATGGAAGAGGCCATGAGCTGTTTCCAACAGTTTATGCACTCTGG AAGGTTCCCGATCTGTTGCCTGCTTTTACACTTAAGGGTGGTGAAGTCTCACGCTTCATA CTGGGGGGTGCCGATCTGATGTTTCCTGGTATTAGCATACCCCCAGAAGGGCTTCCTTCC TTTCAACCTGGCCAGCCATGGTCAGTAAAGGTTCCTGGTAATCCTGCTCCAATTGCTGTT GGGGCCACAACTATGAGCAGTAATGAAGCCTTAAAGGCAGGGTTACGTGGCAAGGCTTTG CGGATTACTCACTACTTTAAGGATTCATTATGGGATTCTGCTGATGGTCGCTATGTTCCA AATGAAGGATTTTATGAGGACATTGTTGTTGAAGATCGTAATTATGCTTCACCGTCTCAA CCTGCTGATTCTTCTGAAGATCATGTAGAAGGCATGCATGACAGTACCATTGAAGGTGAA GAAGCTGCAGTTGATGTTTCTGAGAGCCATACCACAGATCATGACATCCACGTTGAGGCC ATAGAAGATTTAACTGCTGGTGTGAGTGAGGTGAAATTGCCTGAAGATAATGCTACTGAG GAACCAACTGAGGAAAGGGAACATCAGAATTTGTCTACGGAAGAAATTGACTCTCTTTTA GATAAATGTCTTCTGCAAGCTTTACACACGAGTGTAAAAGATAAAGACCTTCCTATTCCT GGAAGTACATTGTGGTCAAATCACATACTCCCCTGCAGACCTACAGGTGTTACTCTGGAT ATTAAGAAGTCATCACACAAAAAGCTATCCAAGTGGTTGCAATCAAAATCTTCCGCTGGC CTTATTTCATCAAAAGAAGACAAGCATAAAAAGGAAGTCATGTTGCTTCGTATCAATCGT GGGCATCCAGATTACATGGCCTTTAAACCAGAAAAGAGGGTACAGGAGCCTGTTGTACAG CATGATAATGTTGTTGCTGAAGGTAGCAGCACGAAGCAACTGGAAGTAGCAGAAACTTAT AAGCCAAGCTCTCATGTTAACCCCATATTTATGGCTGTTGGAGCGGACACGAGCAAGTAC TATAGTGCATCAGAGGCATCTGACATAGTCTTCAGGTACGTTGAAAAGGAAAATTTGGTT AAACAAACAGACAAGGCCAAAGTAGTTTTGGATGTTGCATTATGCGACGCTCTCTACAAA GGAGCCATCAAAAAGGGTTCAGCATACCCAACCGAGATCCACAAGAGGGACCTGGGGTCA ACATTTTTAAACCGAATGCAGATTCACCATAGAGTAGCAAGAGGGAACGAGGTGGTCATT CGCAAGGGCGCCATACGAACCATTCAGATCATGACAGAGAGAAGGCAAGGAAACAAGAAG ATGACCCGGCTATCTGGATTGGAATGCTTCTTAATGGATCCTGACTCGTTAGCTTCTGAG CTGCAGAAGAAGTTTGCTTGCAGCACCACCACAGCTGAGCTTCCAGGTAAGAAAGGGCAA CACGAGGTCTTGGTTCAAGGTGGAGTCATCGATGACCTTGCAAAGCACCTTGTTGATCAT TACGGTGTTCCGAAGAGGTTTATTGAGGTTCTTGACAAAACAAAGCGTTAGAGGACAGGA CAGAAGCAGGCAGACTCTCAGTGCCGGAGGAGCCTGAAGTATCTTCAGGGACAGCGCAGG AAGAGAATGCAGACCAATGCTTAACGATATCAGGATTGTATTCTGTGACTGCCATCATCA GAAGAAATTATGAGAAGATACCTCTTCTCACCACCTCTGGTTTTTATGCTTGGAAAATAC TTTTATCCTTTTTTGTGTTTACAGAAAAATGAGTAGGGCTGTTCTGACTTCTGTCTGAAA TTTTGGTGTGTACCCGTTCCTTTTTTGTAACGTTCTTTTGGTGCCGTGTTCATTCTCCTG AAAAAGCACCTTTTTTGTGTGAGATACGTGTTACGTTTCGTTAGTGACAGACAGGGTTTG ACGCTTTTTAACATGGCATAGTGCTATGGTTAATTCAATACATGCTTTCAT