Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0557100-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21082668:21088255:1 gene:Os02g0557100 gene_biotype:protein_coding transcript_biotype:protein_coding description:AIG1 domain containing protein. (Os02t0557100-01)
Sequence

ATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGCTGACATCACTGTAGTT
CTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAGCATCGTTGGAAGAGAA
GCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTGTCAATTGGCCAGCACC
GCGCTAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGGATTATTTGAAATGACC
ATTACATCTGAGGATGCCGGTAAAGAAATTGTTAAGTGTATGAGTATGGCCAAGGATGGG
ATACATGCAGTGCTGATGGTTTTTTCTGCCACATCTCGTTTTACTCGAGAAGATTCCAGT
ACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGATCACATGATACTAGTA
TTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCATGCTGAATAATGCCCCA
GAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGTTCTCTTTGATAATATG
ACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCTTGATGTTGTTGACTCT
GTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCTCGCTTGCATTAAGGAA
GCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATACAGAAGAGCAAATATCT
GAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGCAAACATTACCAACATG
GTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCAACTCATGGAAGAACAG
AATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCTCCGATCAGATGAGGAG
ATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAATGAGGAATTCCGAAAG
ATGGCTTCTCAACACAAGTGTTCTATTCTATGA

Peptide Sequence

PEP ID

Os02t0557100-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21082668:21088255:1 gene:Os02g0557100 transcript:Os02t0557100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:AIG1 domain containing protein. (Os02t0557100-01)
Sequence

MGGSEYDDDWELPSADITVVLCGKLGCGKSATGNSIVGREAFVSEYSHASVTSTCQLAST
ALKDGRTLNVIDTPGLFEMTITSEDAGKEIVKCMSMAKDGIHAVLMVFSATSRFTREDSS
TIETIKEFFGEKIVDHMILVFTYGDLVGENKLKSMLNNAPEYLQKTVELCKNRVVLFDNM
TKDRWLQEKQLENLLDVVDSVNTNNGGKPFSDQMLACIKEAHAREQEVHDAIGYTEEQIS
ELKKEIQRTRDEQLANITNMVEEKLNITVDKLQQQLMEEQNARLEAERLAAEARLRSDEE
IRKLKKRLEKAQQENEEFRKMASQHKCSIL

Transcript Sequence

Transcript ID

Os02t0557100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21082668:21088255:1 gene:Os02g0557100 gene_biotype:protein_coding transcript_biotype:protein_coding description:AIG1 domain containing protein. (Os02t0557100-01)
Sequence

GTATTCGCAGGCTCATCGACTTCTCGTCTTCCTCTCCTCTCTCTCGTTTCGATTCCCCCG
CGAGAGATTCGATCCAACCAAACCCACCCGCTACCAGCGTCTTCTCCTTCGCGAGCAAGT
TTTTTGAGAGTTTGCAATGGGAGGAAGCGAATACGATGATGACTGGGAGTTGCCTAGCGC
TGACATCACTGTAGTTCTTTGCGGCAAACTTGGCTGTGGCAAGAGCGCAACTGGCAATAG
CATCGTTGGAAGAGAAGCATTTGTATCAGAGTACTCCCATGCTAGTGTGACCAGTACTTG
TCAATTGGCCAGCACCGCGCTAAAGGATGGCCGTACCCTCAATGTTATTGATACGCCAGG
ATTATTTGAAATGACCATTACATCTGAGGATGCCGGTAAAGAAATTGTTAAGTGTATGAG
TATGGCCAAGGATGGGATACATGCAGTGCTGATGGTTTTTTCTGCCACATCTCGTTTTAC
TCGAGAAGATTCCAGTACCATTGAGACAATTAAAGAGTTTTTCGGAGAGAAGATTGTTGA
TCACATGATACTAGTATTTACTTATGGAGATTTAGTTGGTGAAAATAAATTGAAGAGCAT
GCTGAATAATGCCCCAGAGTATCTGCAGAAAACTGTTGAGCTATGCAAAAACAGAGTTGT
TCTCTTTGATAATATGACCAAGGACCGATGGCTCCAAGAGAAGCAACTTGAAAATTTGCT
TGATGTTGTTGACTCTGTGAATACAAATAATGGAGGAAAGCCATTTTCAGATCAAATGCT
CGCTTGCATTAAGGAAGCACATGCCAGAGAACAGGAGGTGCATGATGCTATTGGATATAC
AGAAGAGCAAATATCTGAATTGAAAAAGGAGATCCAGAGAACTCGGGATGAACAGCTTGC
AAACATTACCAACATGGTGGAGGAAAAGCTGAATATCACTGTTGACAAGCTGCAACAGCA
ACTCATGGAAGAACAGAATGCAAGGCTAGAAGCAGAGAGGTTGGCAGCTGAAGCTAGGCT
CCGATCAGATGAGGAGATCCGCAAGCTCAAAAAGCGCCTCGAGAAGGCCCAACAAGAAAA
TGAGGAATTCCGAAAGATGGCTTCTCAACACAAGTGTTCTATTCTATGAGTAGCTTTCTC
CTAGGATCAAGCTGCTGCCATGGTTGAATGCTCCGTGCATTGTTAATAGAGTTCAGAACA
GTGCTCTAGGCTATGTGGTTGACATAAAACTTTTGCTACTGGGCTATCTCATATCTGTAA
ATATACAGGTATTTGGATTTTTAATGTCCAAGGATTTTGACTATC