Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0557000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:21073970:21075184:1 gene:Os02g0557000 gene_biotype:protein_coding transcript_biotype:protein_coding description:CARP motif domain containing protein. (Os02t0557000-01)
Sequence

ATGCCATCCACCGCCGCCGCCGCCGCCGCCGAGATGGAGCCGGAGCCCGACCACACCAAA
CCCTCCACCTCCGCCGCCGCCGCCGGCCACCGCAAGCACCTGGCCATGCTGGAGCGCCTC
TCCAAGCGCGCTGCCGCCCCCGCCCCGTCCCAGGACTCCCCCGTCGCGGCCTTCCTCTCC
CGCTTCGCCGCCGCCAAGCTCGCCGCCGAGTCCGCCCTCTCCGCCTGCCGCTCCTCCCCC
GACGACGCGCAGCCCTCGCTCTCCGCCGCCGCCGCGGCCATCGACGACCTCGACCGCCTC
GTCGCCGAGGCCTCCCACTCCCTCCCACCCTACGAGCTCCGCTCCGCCCTCGCCGCCGCC
TCCGACCTCCGCGCCGCCCACAGGCTCGCCGCCTCCGATCTCCGCCCCAAGAAGTCCTTC
TCCTTCAGGAACAAGAGCAAAGCCCCCAAGAACCCACCGCAAGATCCTCCTCCCACCTTG
CCGCCGCCTCCAGACCAGCCAAACCCCAGCGTCGAGGCGATCCTGCCAGGACTCGGGTTC
CGGGGCCGGAGGGACGCCACATTGGTGAAGGATCTGAGGGTCTCCGACGAGAAGGATGGG
GATTTCACCCTCGCTGATCTCGTCTCCTGTCAGGTTTACCTCAAGGGCAAATGCCGGGCG
CTGCACGTTCACAAGCTGAAGGATTGCCGCGTGTTCGTGGGCGCCGTGTTCGGCTCGGTG
CTCATAGAGGACGTCGAGCGCTGCGCATTCGTGATGGCGGCGCACCAGATCAGGATCCAC
GAGGCGACAGCGACGGATTTCTACCTGAGGGTGAGGAGCAGGCCGATCATTGAGGATTGC
TGCGGCGTGAGGTTCGCGCCGCATGCTCTCAAGTATGAAGGGATTGGGGAGGATTTGAGG
GATGCGGGGCTCGAGGAGGAGACCGGTAATTGGGCGAATGTTGATGACTTTAAGTGGCTC
AGGGCAGTGCAGTCGCCAAATTGGTGTTTGGTTCCGGAGGAAGAGCGGTTGCAGACCATT
GACATTTCAGATGTTCAGGAACGAGAGTATGATAATTAA

Peptide Sequence

PEP ID

Os02t0557000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:21073970:21075184:1 gene:Os02g0557000 transcript:Os02t0557000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:CARP motif domain containing protein. (Os02t0557000-01)
Sequence

MPSTAAAAAAEMEPEPDHTKPSTSAAAAGHRKHLAMLERLSKRAAAPAPSQDSPVAAFLS
RFAAAKLAAESALSACRSSPDDAQPSLSAAAAAIDDLDRLVAEASHSLPPYELRSALAAA
SDLRAAHRLAASDLRPKKSFSFRNKSKAPKNPPQDPPPTLPPPPDQPNPSVEAILPGLGF
RGRRDATLVKDLRVSDEKDGDFTLADLVSCQVYLKGKCRALHVHKLKDCRVFVGAVFGSV
LIEDVERCAFVMAAHQIRIHEATATDFYLRVRSRPIIEDCCGVRFAPHALKYEGIGEDLR
DAGLEEETGNWANVDDFKWLRAVQSPNWCLVPEEERLQTIDISDVQEREYDN

Transcript Sequence

Transcript ID

Os02t0557000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:21073970:21075184:1 gene:Os02g0557000 gene_biotype:protein_coding transcript_biotype:protein_coding description:CARP motif domain containing protein. (Os02t0557000-01)
Sequence

GATGCCATCCACCGCCGCCGCCGCCGCCGCCGAGATGGAGCCGGAGCCCGACCACACCAA
ACCCTCCACCTCCGCCGCCGCCGCCGGCCACCGCAAGCACCTGGCCATGCTGGAGCGCCT
CTCCAAGCGCGCTGCCGCCCCCGCCCCGTCCCAGGACTCCCCCGTCGCGGCCTTCCTCTC
CCGCTTCGCCGCCGCCAAGCTCGCCGCCGAGTCCGCCCTCTCCGCCTGCCGCTCCTCCCC
CGACGACGCGCAGCCCTCGCTCTCCGCCGCCGCCGCGGCCATCGACGACCTCGACCGCCT
CGTCGCCGAGGCCTCCCACTCCCTCCCACCCTACGAGCTCCGCTCCGCCCTCGCCGCCGC
CTCCGACCTCCGCGCCGCCCACAGGCTCGCCGCCTCCGATCTCCGCCCCAAGAAGTCCTT
CTCCTTCAGGAACAAGAGCAAAGCCCCCAAGAACCCACCGCAAGATCCTCCTCCCACCTT
GCCGCCGCCTCCAGACCAGCCAAACCCCAGCGTCGAGGCGATCCTGCCAGGACTCGGGTT
CCGGGGCCGGAGGGACGCCACATTGGTGAAGGATCTGAGGGTCTCCGACGAGAAGGATGG
GGATTTCACCCTCGCTGATCTCGTCTCCTGTCAGGTTTACCTCAAGGGCAAATGCCGGGC
GCTGCACGTTCACAAGCTGAAGGATTGCCGCGTGTTCGTGGGCGCCGTGTTCGGCTCGGT
GCTCATAGAGGACGTCGAGCGCTGCGCATTCGTGATGGCGGCGCACCAGATCAGGATCCA
CGAGGCGACAGCGACGGATTTCTACCTGAGGGTGAGGAGCAGGCCGATCATTGAGGATTG
CTGCGGCGTGAGGTTCGCGCCGCATGCTCTCAAGTATGAAGGGATTGGGGAGGATTTGAG
GGATGCGGGGCTCGAGGAGGAGACCGGTAATTGGGCGAATGTTGATGACTTTAAGTGGCT
CAGGGCAGTGCAGTCGCCAAATTGGTGTTTGGTTCCGGAGGAAGAGCGGTTGCAGACCAT
TGACATTTCAGATGTTCAGGAACGAGAGTATGATAATTAAGATGCTTGGGATGGTTTGCT
TTCGGCTCTTATTATGGATTATTGTTCTGGATTGGTTAATTCTTCTTGATGTTTACTTGG
ATTAAGTTTTGGTTTATTATGAGTTTATAGCTTTCATTGTACCTACATATTGATGCATTA
AGGATTAGAAGTGTG