Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0556600-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:21043834:21050336:-1 gene:Os02g0556600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-dz1 protein precursor. (Os02t0556600-01)
Sequence	ATGGTGGCGAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCG GCGGGGGCGGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGG GCCGCGGCGGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGC TCGGGCCTCTTCGCCGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAAC CAGCACGGCCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCC GTCTACTACTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGC TTCACCACCGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGA TATCATGGCGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCC AAATTCACTTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTC TTCACGAAAAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATAT CCTACCATTGCAGTCCATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCA TTCTGTTTTGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGC GACAAATTGGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACAT TACGGCTACCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCC AATCATCAAAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTG CTGCGTCAGCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGG TATCCACAGGTGATAAAGGATGAAACATCAATTATTTGCTTCTTACTCCATTCCCAAAGA TTCATTGAATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAAC CTGGCCAACTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTG CTTGCATATGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGG GAATTTGTAGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGAC CCTGAGAGTTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGC TTCGAGCGACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATAAAGAAGTG CAGTCCTGCGATAGATCCAGGTGTTCCTAG

Peptide Sequence

PEP ID	Os02t0556600-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:21043834:21050336:-1 gene:Os02g0556600 transcript:Os02t0556600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-dz1 protein precursor. (Os02t0556600-01)
Sequence	MVANEVVAAAAVVEEPAPASAGAVDPMRLASRWRSPAEWGAAAAEMEAEPAPSELNTTNS SGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQKGQTSIG FTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPKFTSGDTIGAGINYFSQEFF FTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKEPFCFDIEGYIFEEKMKQQSVS DKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPPEMYGLSHRKL LRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLEDAVKYARSN LANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVLSTNPNMKD PESCLYSCLEKLLRQLTVCSFERRAFSGDQGDAFLLHKEVQSCDRSRCS

Transcript Sequence

Transcript ID	Os02t0556600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21043834:21050336:-1 gene:Os02g0556600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Pherophorin-dz1 protein precursor. (Os02t0556600-01)
Sequence	GCGACGACGCGACGCCCAACTCCTCACGCTTCCCTTCCCTTCCCTTCCCCCATCCATCCT CTCCTCCGACTCCGACCTCCCGCAACCGCAGCGCCGCCCGATCCGCCGCCACCGCCACCG CCACCGCCGGCAGCTCGATCCCCCGCACTCGGGGGGGTTTTGGAATTGGCGAATGGTGGC GAACGAGGTGGTTGCGGCGGCGGCGGTGGTGGAAGAACCGGCGCCCGCGTCGGCGGGGGC GGTTGACCCGATGAGGCTGGCGTCGCGGTGGCGGTCGCCGGCGGAGTGGGGGGCCGCGGC GGCCGAGATGGAGGCGGAGCCGGCGCCGTCCGAGCTCAACACCACCAACAGCTCGGGCCT CTTCGCCGTCGTCTCTACCGACCGGATGTCCGTCAGGTACCTCGGCGTCAACCAGCACGG CCACGACGTCGGCGTCGTGCAGGCCAACCGCCCCGCCCCCACGCGCCGCGCCGTCTACTA CTTCGAGATGGGCGTCAAGAACGCCGGCCAGAAGGGGCAGACCTCCATCGGCTTCACCAC CGAGAATTTCAAGATGCGCCGCCAGCCCGGCTGGGAGTCTAACAGCTGTGGATATCATGG CGATGATGGCTATCTTTACCGTGGTCCTGGGAAAAGTGAGTCATTTGGTCCCAAATTCAC TTCTGGTGACACAATTGGTGCTGGCATCAACTATTTCTCACAAGAATTTTTCTTCACGAA AAATGGATCTCTAGTTGGATCCTTTCAAAAAGAAATTAAAGGCCCACTATATCCTACCAT TGCAGTCCATAGTCAAGATGAAGAGGTGACAGTAAACTTTGGAAAAGAACCATTCTGTTT TGACATTGAGGGCTATATTTTTGAAGAGAAAATGAAGCAACAATCTGTCAGCGACAAATT GGATTTGCAACCAGACATCAGTCATTGGATTGTTCGTTCATATCTCCTACATTACGGCTA CCAAGATACATTAAATTCTTTTGATATGGCAAGTGAAACTGATCCTCCATCCAATCATCA AAATGGTTATGGGGAACCTCCTGAAATGTATGGTCTTAGCCACAGAAAATTGCTGCGTCA GCTTATCATGAGTGGAGATATTGATTCTGCATTCAAAAAACTTGGAGAATGGTATCCACA GGTGATAAAGGATGAAACATCAATTATTTGCTTCTTACTCCATTCCCAAAGATTCATTGA ATTTATCGGGGCTGGACAACTGGAGGATGCTGTAAAATATGCTCGCTCTAACCTGGCCAA CTTCTTGACACATAAAGCTTTTGATGGGTTGCTAAAGGAGAGCGTGGCCCTGCTTGCATA TGAAAAGCCTGCCGAATCGTGCATTGGATATCTGCTAGACTCTCCACAGCGGGAATTTGT AGCGGATGCAGTGAATGCAGCTGTCCTGTCAACGAACCCGAACATGAAGGACCCTGAGAG TTGCCTTTACTCATGTCTCGAGAAACTACTGAGGCAGCTCACAGTATGCAGCTTCGAGCG ACGTGCATTCAGCGGAGACCAAGGGGATGCATTCTTACTACATAAAGAAGTGCAGTCCTG CGATAGATCCAGGTGTTCCTAGGCATCAAAGCATTCAAGTTGCACCTGCATCTGAGCAGT GAACTCAGAGATGAGACTTTGTGCCCCTCTTGGAAGGAAAGGGATTCACCTCGGAGCGGA GATGTAGACCATGATCCATGCGCAATCACAGATACTTTGATTCTTGAAGTTTCGCAGTAT ACTCTCCACAAGGTGAACGCCTAACTGCTGGGAAATTTGGCAGCAGCTCCTTCCCTGTAA TCTGAAAACTTACATTCACACATGGCCTTAAACATCTCTGTTTCCATAAACTCGGAAGCT TTGAGCTGGTAGACATTCTGAATGTGAAATGAGAAGAGAAAAACAATAAGATTTGTGTAA ATGAAATCGAGTTGCCCTTTAACCTTGTGGTTCATTCTAATTCATTGATACATTCAATTG C