Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0555900-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:21002439:21008209:-1 gene:Os02g0555900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0315A08.7 protein. (Os02t0555900-00)
Sequence	ATGCCGCTGGGGTGGCTGCGGAGGAAGTGGAGGCGGAGGCGCGACAAGCCCGCGGGGGAC GCCGCCGCCGCCTCTACCACGGCGACCTCGCCGAGGGACTCCGTCGACCTGGGGGGAACG TCCGCGTACCCGTCCGCCTGCGCGTCTCCATCCTCCACCACGCCGACGCCGACGCGGTGG GGCGCCGGCGCCAGCGCCGTGCCCCCGCGATGCCCGGGGCCACAGGACCAGCACCACGGG CTGCCGCTCCCGCGGCCGGTGTCCAAGTCGGCGCCGATGCCCCTGGCGTCCCCCGCCGCG GCGCCGCCGTCGCCGTCGCCGCCGGCGTGCGCGTCGGCGGCCGAGTCGGTCTCGGGCGGG AGCTCGTCGGACGACGAGGCGGATCACCGGAATTACAGGTATACAGATCCAGTTGTCCAC ACTAGCGGAAGGACTGTGCTACCTGATGGTCATAATGGCATGGTAGAAGAGAAGCGTTTT GTATCATGTGGTATTCTCCAGGAGCATCAAAAATTCTTTGAGGTTCCTATTGCAAATGTG AACGAAGTTCATCACATGCAAATCTTTGAACCTTCAACAAGTGAATCTAGTTATTCTCGG GGCAGAATGTTGCCTGAGGATACATTTGCTGTAAGACCAAGAAGTCATTCCCCTGGTCCG AGAGGGCATGCTTATTCTGCTTGCTGCGCAAGAGATTTTGGGTTTACCCCAAGGTCACCA GTGAAAAGGATGGATGATCCTAGGAGTCCATCTCAACCCTTGCCTCTCCCTCCAGTTCCT GTTGCTAGCTCATCCATTCCTTCATCTTCCATTACTTCTAGTCAATTCCAATCACAGTGG AAAAGGGGGAAGCTATTAGGTAGCGGCACATTTGGTCAGGTTTATCTTGGTTTCAACAGT GAAAATGGGCAGTTTTGTGCAATCAAGGAGGTGCAGGTTTTTTTGGACGATTCACATTCA AAGGAACGCCTTAGGCAATTGAATCAGGAAATAGATATGCTTAAGCAGCTCTCGCACCAA AATATCGTGCAATATTATGGAAGTGAACTGGCTGATGAAGCTCTGTCCATCTATCTGGAA TATGTTTCTGGAGGTTCAATTCATAAATTACTTAGAGAGTACGGTCCATTTAAGGAACCT GTGATTCGTAATTATACTCGGCAGATTCTTTCAGGGCTTGCCTACTTGCATGGTAGGAAT ACTGTACACAGAGACATTAAAGGAGCAAACATACTTGTGGGCCCTAATGGTGAAGTCAAA CTTGCGGACTTTGGCATGGCTAAACATGTGACATCTTTCGCCGAAATACGCTCTTTCAGA GGAAGCCCATACTGGATGGCTCCTGAGGTTGTAATGAATAACAAAGGATATAATCTTGCG GTTGATATATGGAGCCTTGGATGTACAATTATTGAGATGGCAACCGCGAAGCATCCCTGG TATCCGTATGAAGATGTGGCAGCAATATTTAAAATTGCAAACAGTAAAGATATACCAGAA ATTCCAGATTGTTTTTCCAAAGAAGGGAAAGATTTCCTAAGTTTGTGCTTAAAGCGTGAT CCAGTACAGAGGCCTTCTGCAGCTTCGTTGCTGGGTCACCCTTTTGTCCATGACCATCAG GCTGTAAGAGCACCAACATGCAATGGTACTCAGTTGAGAAATGGAATTTCTTCCCCTGCA GCAAGTCATAGAAAGGTGAGATTTCTGCTCATTTGTTTTTTTCAGAGTCAATCCTATCCT TCTCCTCACAATACCTCCAGGTATACCATTCTACCTCCTGCCCATCCTTTGTTTCCAAGT TCATCTTGTAACCTACTTCTCAACATGGCCGTGCACGTGCAGCAGCCCAACTGCAGTGAG AGCAAACATGTCTTTACCGGTGTCGCCATGCTCAAGCCCGCTGCGGCAGTTCAAGCAATC AAACTGGAGCTGCCTCCCTTCACCAACGCATCCGGCGCTCTCCCCTGGATTATCAGCAGC AGCCTACCCAAACAATCCCTTGCAGAACCAGTCGAGGCGAAGCGCCGCAGTTCCAGATCC CTGGCTGGAGTTGAGCCAGCCGAGACCTCCAAGCCCATATGGCTCTCCAAAGAGATTCTA GGCCTTCTGACCTGCAGAGTTTCTTGTAGCATGGCTCCTCAAAAGAGATTCTAG

Peptide Sequence

PEP ID	Os02t0555900-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:21002439:21008209:-1 gene:Os02g0555900 transcript:Os02t0555900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0315A08.7 protein. (Os02t0555900-00)
Sequence	MPLGWLRRKWRRRRDKPAGDAAAASTTATSPRDSVDLGGTSAYPSACASPSSTTPTPTRW GAGASAVPPRCPGPQDQHHGLPLPRPVSKSAPMPLASPAAAPPSPSPPACASAAESVSGG SSSDDEADHRNYRYTDPVVHTSGRTVLPDGHNGMVEEKRFVSCGILQEHQKFFEVPIANV NEVHHMQIFEPSTSESSYSRGRMLPEDTFAVRPRSHSPGPRGHAYSACCARDFGFTPRSP VKRMDDPRSPSQPLPLPPVPVASSSIPSSSITSSQFQSQWKRGKLLGSGTFGQVYLGFNS ENGQFCAIKEVQVFLDDSHSKERLRQLNQEIDMLKQLSHQNIVQYYGSELADEALSIYLE YVSGGSIHKLLREYGPFKEPVIRNYTRQILSGLAYLHGRNTVHRDIKGANILVGPNGEVK LADFGMAKHVTSFAEIRSFRGSPYWMAPEVVMNNKGYNLAVDIWSLGCTIIEMATAKHPW YPYEDVAAIFKIANSKDIPEIPDCFSKEGKDFLSLCLKRDPVQRPSAASLLGHPFVHDHQ AVRAPTCNGTQLRNGISSPAASHRKVRFLLICFFQSQSYPSPHNTSRYTILPPAHPLFPS SSCNLLLNMAVHVQQPNCSESKHVFTGVAMLKPAAAVQAIKLELPPFTNASGALPWIISS SLPKQSLAEPVEAKRRSSRSLAGVEPAETSKPIWLSKEILGLLTCRVSCSMAPQKRF

Transcript Sequence

Transcript ID	Os02t0555900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:21002439:21008209:-1 gene:Os02g0555900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0315A08.7 protein. (Os02t0555900-00)
Sequence	ATGCCGCTGGGGTGGCTGCGGAGGAAGTGGAGGCGGAGGCGCGACAAGCCCGCGGGGGAC GCCGCCGCCGCCTCTACCACGGCGACCTCGCCGAGGGACTCCGTCGACCTGGGGGGAACG TCCGCGTACCCGTCCGCCTGCGCGTCTCCATCCTCCACCACGCCGACGCCGACGCGGTGG GGCGCCGGCGCCAGCGCCGTGCCCCCGCGATGCCCGGGGCCACAGGACCAGCACCACGGG CTGCCGCTCCCGCGGCCGGTGTCCAAGTCGGCGCCGATGCCCCTGGCGTCCCCCGCCGCG GCGCCGCCGTCGCCGTCGCCGCCGGCGTGCGCGTCGGCGGCCGAGTCGGTCTCGGGCGGG AGCTCGTCGGACGACGAGGCGGATCACCGGAATTACAGGTATACAGATCCAGTTGTCCAC ACTAGCGGAAGGACTGTGCTACCTGATGGTCATAATGGCATGGTAGAAGAGAAGCGTTTT GTATCATGTGGTATTCTCCAGGAGCATCAAAAATTCTTTGAGGTTCCTATTGCAAATGTG AACGAAGTTCATCACATGCAAATCTTTGAACCTTCAACAAGTGAATCTAGTTATTCTCGG GGCAGAATGTTGCCTGAGGATACATTTGCTGTAAGACCAAGAAGTCATTCCCCTGGTCCG AGAGGGCATGCTTATTCTGCTTGCTGCGCAAGAGATTTTGGGTTTACCCCAAGGTCACCA GTGAAAAGGATGGATGATCCTAGGAGTCCATCTCAACCCTTGCCTCTCCCTCCAGTTCCT GTTGCTAGCTCATCCATTCCTTCATCTTCCATTACTTCTAGTCAATTCCAATCACAGTGG AAAAGGGGGAAGCTATTAGGTAGCGGCACATTTGGTCAGGTTTATCTTGGTTTCAACAGT GAAAATGGGCAGTTTTGTGCAATCAAGGAGGTGCAGGTTTTTTTGGACGATTCACATTCA AAGGAACGCCTTAGGCAATTGAATCAGGAAATAGATATGCTTAAGCAGCTCTCGCACCAA AATATCGTGCAATATTATGGAAGTGAACTGGCTGATGAAGCTCTGTCCATCTATCTGGAA TATGTTTCTGGAGGTTCAATTCATAAATTACTTAGAGAGTACGGTCCATTTAAGGAACCT GTGATTCGTAATTATACTCGGCAGATTCTTTCAGGGCTTGCCTACTTGCATGGTAGGAAT ACTGTACACAGAGACATTAAAGGAGCAAACATACTTGTGGGCCCTAATGGTGAAGTCAAA CTTGCGGACTTTGGCATGGCTAAACATGTGACATCTTTCGCCGAAATACGCTCTTTCAGA GGAAGCCCATACTGGATGGCTCCTGAGGTTGTAATGAATAACAAAGGATATAATCTTGCG GTTGATATATGGAGCCTTGGATGTACAATTATTGAGATGGCAACCGCGAAGCATCCCTGG TATCCGTATGAAGATGTGGCAGCAATATTTAAAATTGCAAACAGTAAAGATATACCAGAA ATTCCAGATTGTTTTTCCAAAGAAGGGAAAGATTTCCTAAGTTTGTGCTTAAAGCGTGAT CCAGTACAGAGGCCTTCTGCAGCTTCGTTGCTGGGTCACCCTTTTGTCCATGACCATCAG GCTGTAAGAGCACCAACATGCAATGGTACTCAGTTGAGAAATGGAATTTCTTCCCCTGCA GCAAGTCATAGAAAGGTGAGATTTCTGCTCATTTGTTTTTTTCAGAGTCAATCCTATCCT TCTCCTCACAATACCTCCAGGTATACCATTCTACCTCCTGCCCATCCTTTGTTTCCAAGT TCATCTTGTAACCTACTTCTCAACATGGCCGTGCACGTGCAGCAGCCCAACTGCAGTGAG AGCAAACATGTCTTTACCGGTGTCGCCATGCTCAAGCCCGCTGCGGCAGTTCAAGCAATC AAACTGGAGCTGCCTCCCTTCACCAACGCATCCGGCGCTCTCCCCTGGATTATCAGCAGC AGCCTACCCAAACAATCCCTTGCAGAACCAGTCGAGGCGAAGCGCCGCAGTTCCAGATCC CTGGCTGGAGTTGAGCCAGCCGAGACCTCCAAGCCCATATGGCTCTCCAAAGAGATTCTA GGCCTTCTGACCTGCAGAGTTTCTTGTAGCATGGCTCCTCAAAAGAGATTCTAG