Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0555100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:20966831:20969331:1 gene:Os02g0555100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0555100-01)
Sequence	ATGCGCCGCCTTCTCACTCCGCCATGGCCGGCGGCGGCGGCGGCTGCTCCGGCCAGCGCC GCCGCCGCCTCCGCCGTCACAGTAGAGGCGGTGCTGGCCCTGCTGGAGCGCGCGATCTCC GCGGGGGACGTGCGCCGCCTCGGCGCGGCGGTGCACGCGCTCCTCGTCAAGACGGCGCTC ACCCACCACACCCTCCTCTCCAACCGCCTCGTCGCGCTCTACGCGCTGCTCCCCACCCCG GCGGCATCGCTCGCCGCCTTCGACGACCTCCCGCACAAGAACGCGCACTCGTACAACTCC CTTCTGGCGGCGCTGGCCCGGGGCCGCGGCACCCTCCCCGACGCCCTCCGCCTGCTCGAC GGAATGCCGCCCGCCTCCCGCAACGTCGTCTCCTACAACACCGTCATCTCGTCGCTCGCG CGTCACGGCCGCGAGTCTGAGGCGCTCCGCGTGTTCGCCCAGCTGGCCAGGGACAGGGGC CTGGGGCAGCAGCAGGTGGCCATCGACCGGTTCACGGTGGTCAGCGCCGCGAGCGCGTGC GCGGGGCTCCGGGATGCGAGGCACCTCCGCGAGTTGCATGGCGCGGTGGTGGTGTCGGGT ATGGAGGTGACTGTCATCATGGCCAACGCAATGGTGGACGCCTACAGCAAGGCCGGGAGG GTGGAGGATGCACGGGGGGTATTCGACCAGATGACCATCCGTGACTCGGTTTCTTGGACA TCGATGATTGCAGGGTATTGCCGGGCAAGCATGCTTGACGATGCTGTGCAAGTATTCGAC ATGATGCCAGCGCAGGACGCCATAGCATGGACAGCACTCATCTCTGGGCATGAGCAGAAT GGGGAGGAGGAGATCGCTCTCGAGCTTTTTGAAAGGATGACAGGTGAGGGGGTAGTGCCA ACCCCCTTTGCCCTCGTGTCATGTCTGGGTGCGTGCGCCAAGGTTGGTCTTGTCGCCCGA GGGAAGGAAGTGCATGGCTTCATCTTGCGCAGGAGCATCGGTTCAGACCCTTTCAACGTT TTCATCCACAATGCCCTTATTGACATGTATTCCAAGTGTGGCGACATGGTAGCGGCCATG GCGGTGTTTGACAGGATGCTTGAGAGGGACATCATCTCTTGGAACTCCATGGTGACAGGG TTCTCGCACAATGGCCAGGGAAAGCAGTCACTTGCAGTGTTTGAGAGGATGCTTAAAGAT GAAGTACAACCAACCTATGTCACTTTTCTCGCTGTCCTCACAGCTTGCAGCCATGCTGGT CTAGTCTCTGATGGCCGCCGGATTCTTGAATCAATGCAGGACCATGGTGTTGAACCAAGA GCTGAACACTACGCCGCTTTCATTGATGCTCTTGGTCGGAATCGCCAGCTGGAAGAAGCA AGTGAGTTCATCAAAGGCTTGTCCTCCAAGATCGGTCTGGGTACAACTGGGTCATGGGGG GCCCTCCTTGGTGCATGTCATGTTCATGGCAATATTGAGATCGCGGAAGAAGTTGCCGAG GCCCTGTTCCAGTTGGAGCCTGAGAACAGTGGTCGGTATGTCATGTTGTCAAACATATAC TCAGCAGCAGGACAGTGGGACGATGCCCGCCAGGTCAGGGCTCTCATGAAGGGGAAAGGA TTGAGGAAGGACCAAGCTTATAGTTGGATAGAGGTGCAGAGAGCAAAACACATGTTCGTC GCCGATGACACATCTCACCATGAGGCGAATGAAATATATGAGATGCTGGACAAGCTTTTT CATCACATGTTCATTATAGGGGGTAATGTTGAGGAGCTTATAGTTGGATAG

Peptide Sequence

PEP ID	Os02t0555100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:20966831:20969331:1 gene:Os02g0555100 transcript:Os02t0555100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0555100-01)
Sequence	MRRLLTPPWPAAAAAAPASAAAASAVTVEAVLALLERAISAGDVRRLGAAVHALLVKTAL THHTLLSNRLVALYALLPTPAASLAAFDDLPHKNAHSYNSLLAALARGRGTLPDALRLLD GMPPASRNVVSYNTVISSLARHGRESEALRVFAQLARDRGLGQQQVAIDRFTVVSAASAC AGLRDARHLRELHGAVVVSGMEVTVIMANAMVDAYSKAGRVEDARGVFDQMTIRDSVSWT SMIAGYCRASMLDDAVQVFDMMPAQDAIAWTALISGHEQNGEEEIALELFERMTGEGVVP TPFALVSCLGACAKVGLVARGKEVHGFILRRSIGSDPFNVFIHNALIDMYSKCGDMVAAM AVFDRMLERDIISWNSMVTGFSHNGQGKQSLAVFERMLKDEVQPTYVTFLAVLTACSHAG LVSDGRRILESMQDHGVEPRAEHYAAFIDALGRNRQLEEASEFIKGLSSKIGLGTTGSWG ALLGACHVHGNIEIAEEVAEALFQLEPENSGRYVMLSNIYSAAGQWDDARQVRALMKGKG LRKDQAYSWIEVQRAKHMFVADDTSHHEANEIYEMLDKLFHHMFIIGGNVEELIVG

Transcript Sequence

Transcript ID	Os02t0555100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20966831:20969331:1 gene:Os02g0555100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0555100-01)
Sequence	AAGCGCATGCGCCGCCTTCTCACTCCGCCATGGCCGGCGGCGGCGGCGGCTGCTCCGGCC AGCGCCGCCGCCGCCTCCGCCGTCACAGTAGAGGCGGTGCTGGCCCTGCTGGAGCGCGCG ATCTCCGCGGGGGACGTGCGCCGCCTCGGCGCGGCGGTGCACGCGCTCCTCGTCAAGACG GCGCTCACCCACCACACCCTCCTCTCCAACCGCCTCGTCGCGCTCTACGCGCTGCTCCCC ACCCCGGCGGCATCGCTCGCCGCCTTCGACGACCTCCCGCACAAGAACGCGCACTCGTAC AACTCCCTTCTGGCGGCGCTGGCCCGGGGCCGCGGCACCCTCCCCGACGCCCTCCGCCTG CTCGACGGAATGCCGCCCGCCTCCCGCAACGTCGTCTCCTACAACACCGTCATCTCGTCG CTCGCGCGTCACGGCCGCGAGTCTGAGGCGCTCCGCGTGTTCGCCCAGCTGGCCAGGGAC AGGGGCCTGGGGCAGCAGCAGGTGGCCATCGACCGGTTCACGGTGGTCAGCGCCGCGAGC GCGTGCGCGGGGCTCCGGGATGCGAGGCACCTCCGCGAGTTGCATGGCGCGGTGGTGGTG TCGGGTATGGAGGTGACTGTCATCATGGCCAACGCAATGGTGGACGCCTACAGCAAGGCC GGGAGGGTGGAGGATGCACGGGGGGTATTCGACCAGATGACCATCCGTGACTCGGTTTCT TGGACATCGATGATTGCAGGGTATTGCCGGGCAAGCATGCTTGACGATGCTGTGCAAGTA TTCGACATGATGCCAGCGCAGGACGCCATAGCATGGACAGCACTCATCTCTGGGCATGAG CAGAATGGGGAGGAGGAGATCGCTCTCGAGCTTTTTGAAAGGATGACAGGTGAGGGGGTA GTGCCAACCCCCTTTGCCCTCGTGTCATGTCTGGGTGCGTGCGCCAAGGTTGGTCTTGTC GCCCGAGGGAAGGAAGTGCATGGCTTCATCTTGCGCAGGAGCATCGGTTCAGACCCTTTC AACGTTTTCATCCACAATGCCCTTATTGACATGTATTCCAAGTGTGGCGACATGGTAGCG GCCATGGCGGTGTTTGACAGGATGCTTGAGAGGGACATCATCTCTTGGAACTCCATGGTG ACAGGGTTCTCGCACAATGGCCAGGGAAAGCAGTCACTTGCAGTGTTTGAGAGGATGCTT AAAGATGAAGTACAACCAACCTATGTCACTTTTCTCGCTGTCCTCACAGCTTGCAGCCAT GCTGGTCTAGTCTCTGATGGCCGCCGGATTCTTGAATCAATGCAGGACCATGGTGTTGAA CCAAGAGCTGAACACTACGCCGCTTTCATTGATGCTCTTGGTCGGAATCGCCAGCTGGAA GAAGCAAGTGAGTTCATCAAAGGCTTGTCCTCCAAGATCGGTCTGGGTACAACTGGGTCA TGGGGGGCCCTCCTTGGTGCATGTCATGTTCATGGCAATATTGAGATCGCGGAAGAAGTT GCCGAGGCCCTGTTCCAGTTGGAGCCTGAGAACAGTGGTCGGTATGTCATGTTGTCAAAC ATATACTCAGCAGCAGGACAGTGGGACGATGCCCGCCAGGTCAGGGCTCTCATGAAGGGG AAAGGATTGAGGAAGGACCAAGCTTATAGTTGGATAGAGGTGCAGAGAGCAAAACACATG TTCGTCGCCGATGACACATCTCACCATGAGGCGAATGAAATATATGAGATGCTGGACAAG CTTTTTCATCACATGTTCATTATAGGGGGTAATGTTGAGGAGCTTATAGTTGGATAGAGG TGCAGAGAGAAAAACACTTGTTTGTCGCTGCTAACACATCTCACTGTGACGCAAATGAAA TATATGAGATGCTGGACAAGCTTTTTCATCACGTGCTCGGGGTAATGTTGAGGACAAGCA TGGCAATTTTGTTTTGTGCTGAAAGATACATCCTCTGGAATGAAACAATTGCTTTAGCAT TGCAAGAACAAGGCCATTGGTCTCAGGCATGAGGGATGAAGCCCACTGATTTGCCTTCAG CATCCTTGGTATGGCAGATTGGTGGTGTGTTTCAAGGATGCTGCAAAGGAGCGTCAGAGT CCAAAATGTGGTTATTGTGTTTCTTTGAGATTGCAATCACAAATAAACTCGTACGATTTT GATTCGTTTGGAACTTGGCATCCTGAAGGATCAATTTTTCACTTGAAGATGACAACTGAC AGGACAAATTCAGAGTCCAGAACTTTGGGCCATTGCCTCGGCAGAGCTTTACAATTGCCT GATCCAGCTCAATTTGTGAGTTTGAAGAATCAACTACTGAGTCATTTACTCATTTTCCCC CCTCTGCAATAGAGGTGTTGATTTCCAATCTTTGCCACGATGATCGTATATTTGGATTTG GGAAGGTGGTAGGATAGAAGTCTTCAGCTTTCCACTCTTTGTAATTTGTAGTCTTTGTTA TTGAACGTTCAGAGTACATATATAATATAATTTTTGTGTGC