Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0554300-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:20921441:20932806:-1 gene:Os02g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC1-like protein AtSAC1b (SAC domain protein 6). (Os02t0554300-01)
Sequence	ATGGGTGGGGCAAATGACTCAAGTCCATCCTCTAAACTTCACACAAGACTGAGACTATGG GAGTTCCCAGACCGCTATGTATTTGAGCCGATTGATGGTCTTGCTGACTTGTATCTGTCA GCTAACCGTTCTGATGGTTCAATGAATCTAGTTGAAGAGTTGCCACCACGTGACTCTTCT ACAAAACCAAAATGTCAAACAGTGTATGGTGTGATAGGAGTTCTCAAGCTTTCAGTTGGA TCATATTTTTTAGTGATAACAGGCCGTGATTGTGTGGGATCCTACTTGGGACATGCAATT TTTAAAGTGACAGGACTAAAAGTTCTCCCCTGCAGTAACTCACGTAGCACTTCTGGCAAT CAGAGTAAAATGGAAACAGAATTTTCAGAACTCCTGCATGCTGCAGAGAAGACTATAGGC CTGTACTTCTCATATGATATCAACTTAACACTTACTTTGCAGAGGCTACATAATCTTGGT GATGAGTTCAAATCACTTCCGCTTTGGAGACAGGCAGAACCAAGATTTCTATGGAACAGT TACTTGCTGGAACCTCTAATTGAGAACAAGCTGGACCAGTACTTGTTGCCAGTCATTCAA GGCAGCTTTCAGAATATCCATGCAGAAGTTGGATCGGAGAAGGTAAATGTGACCCTGATT GCACGTAGGTGCACACGGAGGATAGGTACACGAATGTGGAGACGTGGAGCTGACCCAGAG GGTTATGCTGCCAACTTTGTTGAATCAGAGCAGATAATGGAATCAAAAGGGTTCACAGCA TCCTATGTACAAGTTCGAGGGTCCATACCATTCTTGTGGGTGCAGATTGTTGATTTGACA TATAAACCTAGCTTTGACATTGTTAGACAAGAGGAGGCGCCACGCATACTTGAGCAGCAC TTTCATGATTTACAGAAGAAATATGGAGCTGTATTGGCTGTTGATCTTGTCAATACACAC GGTGGTGAAGGTCGCCTCCATGACAGATATGCAAAATCTATTGAACCTATTCTCAGTGAA GACATAAGATATGTGCATTTTGACTTCCATCGAATCTGTGGTCATATTCACTTTGAGCGC CTTTCTCAGCTCTACAATCAAATTGAAGATTATCTCAAGAAACATAGGTATTTCCTTTTG AATGGTAAAGGTGAAAAAATTGAGGAGCAGACTGGCACTATCAGGACAAATTGTGTCGAT TGCTTAGATCGCACCAATGTAACTCAGAGCATGATTGGAGGAAAGATACTAGAAAACCAA CTTCAGCGAATAGGGGTTCTCGGTGTTAATGATACGATAAGCAACCATCCAGCTTTTGAT GCAAAATACAAAGTTTTATGGGCCAACCATGGAGATTCAATAAGCACTCAGTACTCTGGA ACTCCGGCATTGAAGGGCGATTTTGTTCGGTATGGGAAGAGAAGTACCCAGGGAATTCTG AATGATCTGTGGAATTCACTTGCTAGATACTACTTGAATAACTTTGCAGATGGCACTAAA CAGGATGCCATGGATCTACTTCAAGGACATTACATTATATCTGTTAGCCGCGACATGGCA GGTCCAAGCAAAGCAGGACTTCTAGAGAATTATGCGTCCTTCCGCCTTGCTTTTGCATTG GTTATGGGAGCTCTTATGTTCATGATGATGTCACTAAGACAAGCCAGGAATGATGTTCGC CATTTAGTGTTGTCACTTCTATGGGCTGGTCTTTGCATTGGCATCACACATTTTGTCAGA GCCAATGGTCGGGTGTTCACCAACAGACCTCGTTTTTATCAGTCGCGCCATTGA

Peptide Sequence

PEP ID	Os02t0554300-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:20921441:20932806:-1 gene:Os02g0554300 transcript:Os02t0554300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC1-like protein AtSAC1b (SAC domain protein 6). (Os02t0554300-01)
Sequence	MGGANDSSPSSKLHTRLRLWEFPDRYVFEPIDGLADLYLSANRSDGSMNLVEELPPRDSS TKPKCQTVYGVIGVLKLSVGSYFLVITGRDCVGSYLGHAIFKVTGLKVLPCSNSRSTSGN QSKMETEFSELLHAAEKTIGLYFSYDINLTLTLQRLHNLGDEFKSLPLWRQAEPRFLWNS YLLEPLIENKLDQYLLPVIQGSFQNIHAEVGSEKVNVTLIARRCTRRIGTRMWRRGADPE GYAANFVESEQIMESKGFTASYVQVRGSIPFLWVQIVDLTYKPSFDIVRQEEAPRILEQH FHDLQKKYGAVLAVDLVNTHGGEGRLHDRYAKSIEPILSEDIRYVHFDFHRICGHIHFER LSQLYNQIEDYLKKHRYFLLNGKGEKIEEQTGTIRTNCVDCLDRTNVTQSMIGGKILENQ LQRIGVLGVNDTISNHPAFDAKYKVLWANHGDSISTQYSGTPALKGDFVRYGKRSTQGIL NDLWNSLARYYLNNFADGTKQDAMDLLQGHYIISVSRDMAGPSKAGLLENYASFRLAFAL VMGALMFMMMSLRQARNDVRHLVLSLLWAGLCIGITHFVRANGRVFTNRPRFYQSRH

Transcript Sequence

Transcript ID	Os02t0554300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20921441:20932806:-1 gene:Os02g0554300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to SAC1-like protein AtSAC1b (SAC domain protein 6). (Os02t0554300-01)
Sequence	AGCTACACACGGAAACGGCCGCCGAACAAAGCGAACAACTACTAGTCGTCTCGTCGTGCT GCGCACTCGCCCCATCGACGAGAGATCGCCTCCGCCTCGCACCCGCCGGCGCCGGCGCCG CCTCCTCCTCCTCCTCCCGCCGTTCCACCGCCGCGCCTCTTCCCCGCCCCGATCGGCTGC CGCCGCCGCAGCTGCTCGCCGCCTCGTTTCCGACTCCCAAGGGCATTCCTCCATGGGTGG GGCAAATGACTCAAGTCCATCCTCTAAACTTCACACAAGACTGAGACTATGGGAGTTCCC AGACCGCTATGTATTTGAGCCGATTGATGGTCTTGCTGACTTGTATCTGTCAGCTAACCG TTCTGATGGTTCAATGAATCTAGTTGAAGAGTTGCCACCACGTGACTCTTCTACAAAACC AAAATGTCAAACAGTGTATGGTGTGATAGGAGTTCTCAAGCTTTCAGTTGGATCATATTT TTTAGTGATAACAGGCCGTGATTGTGTGGGATCCTACTTGGGACATGCAATTTTTAAAGT GACAGGACTAAAAGTTCTCCCCTGCAGTAACTCACGTAGCACTTCTGGCAATCAGAGTAA AATGGAAACAGAATTTTCAGAACTCCTGCATGCTGCAGAGAAGACTATAGGCCTGTACTT CTCATATGATATCAACTTAACACTTACTTTGCAGAGGCTACATAATCTTGGTGATGAGTT CAAATCACTTCCGCTTTGGAGACAGGCAGAACCAAGATTTCTATGGAACAGTTACTTGCT GGAACCTCTAATTGAGAACAAGCTGGACCAGTACTTGTTGCCAGTCATTCAAGGCAGCTT TCAGAATATCCATGCAGAAGTTGGATCGGAGAAGGTAAATGTGACCCTGATTGCACGTAG GTGCACACGGAGGATAGGTACACGAATGTGGAGACGTGGAGCTGACCCAGAGGGTTATGC TGCCAACTTTGTTGAATCAGAGCAGATAATGGAATCAAAAGGGTTCACAGCATCCTATGT ACAAGTTCGAGGGTCCATACCATTCTTGTGGGTGCAGATTGTTGATTTGACATATAAACC TAGCTTTGACATTGTTAGACAAGAGGAGGCGCCACGCATACTTGAGCAGCACTTTCATGA TTTACAGAAGAAATATGGAGCTGTATTGGCTGTTGATCTTGTCAATACACACGGTGGTGA AGGTCGCCTCCATGACAGATATGCAAAATCTATTGAACCTATTCTCAGTGAAGACATAAG ATATGTGCATTTTGACTTCCATCGAATCTGTGGTCATATTCACTTTGAGCGCCTTTCTCA GCTCTACAATCAAATTGAAGATTATCTCAAGAAACATAGGTATTTCCTTTTGAATGGTAA AGGTGAAAAAATTGAGGAGCAGACTGGCACTATCAGGACAAATTGTGTCGATTGCTTAGA TCGCACCAATGTAACTCAGAGCATGATTGGAGGAAAGATACTAGAAAACCAACTTCAGCG AATAGGGGTTCTCGGTGTTAATGATACGATAAGCAACCATCCAGCTTTTGATGCAAAATA CAAAGTTTTATGGGCCAACCATGGAGATTCAATAAGCACTCAGTACTCTGGAACTCCGGC ATTGAAGGGCGATTTTGTTCGGTATGGGAAGAGAAGTACCCAGGGAATTCTGAATGATCT GTGGAATTCACTTGCTAGATACTACTTGAATAACTTTGCAGATGGCACTAAACAGGATGC CATGGATCTACTTCAAGGACATTACATTATATCTGTTAGCCGCGACATGGCAGGTCCAAG CAAAGCAGGACTTCTAGAGAATTATGCGTCCTTCCGCCTTGCTTTTGCATTGGTTATGGG AGCTCTTATGTTCATGATGATGTCACTAAGACAAGCCAGGAATGATGTTCGCCATTTAGT GTTGTCACTTCTATGGGCTGGTCTTTGCATTGGCATCACACATTTTGTCAGAGCCAATGG TCGGGTGTTCACCAACAGACCTCGTTTTTATCAGTCGCGCCATTGAAGCAAAACAACCAC TTTACACGGACACTGAGCTGCCTCATAGGTTATCATTTTTCATCAGACAGTCAGCACCTT GTTTCATATGAAGATATATTGGTCGCATTTTTTGCTGGGAATTTGACCCTCCCCTATATT GTAATGAGTTTTATTTTCCATTTTTGTAACAAGTTTTTTTTTCCTTTTCCTTCTCATTGT TTTGATTTCCAGCCATCTTTTGGGGCATCACGTTCACGATTCTGTTTGACTTAGCAGTAT ATAATTCAATACACCTCCTGTACACTGTTTCATCGACAACAACTATATTTGACATATTTT TCTTGCAAGGATTAATTATGTTCAAATTCCAGAATGGATTACTGATCAGTAAAAAATATG TTGGCACAGTTTTTCAAGATCC