Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0553200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:20868385:20872077:-1 gene:Os02g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 8 description:Thylakoid membrane-bound ascorbate peroxidase, Tolerance to bacterial blight, Response to NaCl (Os02t0553200-01)
Sequence	ATGGCGGAGCGCATCGCCGCCTCCCTCCTCCCGGCTGCCTCGCCCTCGCCTGCTCCGTCC CCTCCCCCCCCGCGCCCCCGCGTCTCCGCCGCGGCCGCCGCCTCCTTCCCATGCTGCTCC ACCAGCGCCGGCGGCCTCCGCCTCCGCTCCCGCCCGTCTCGCTTCCCGCAGAAGGCTGCG ACGACGAGGAGCGGGCGCGCCGGCGCGGGGGCGCGGGCGGTGGTCCGGTGCATGGCGGCG GCGGCGGTGGCGGCGTCCGACGCGGCGCAGCTCAAGAGCGCCCGGGAGGACATCAGGGAG ATCCTCAAGACCACCTACTGCCACCCCATCATGGTCCGTCTTGGGTGGCACGATTCTGGC ACGTACGACAAGAACATCGAGGAGTGGCCGCAGAGGGGCGGAGCCGACGGGAGCTTGAGA TTTGACGCCGAATTGAGCCACGGAGCCAATGCTGGTCTGATTAATGCTTTGAAGCTTATC CAACCAATCAAGGACAAATACCCGGGTATAACTTATGCTGATTTGTTCCAGTTGGCAAGT GCTACAGCAATTGAGGAAGCTGGTGGGCCGAAAATTCCAATGAAATATGGACGAGTTGAT GTCACAGCAGCTGAGCAGTGCCCACCAGAGGGGAGGCTTCCTGATGCCGGTCCACGTGTG CCCGCTGATCATCTTAGGGAGGTATTCTACAGGATGGGCCTTGATGACAAGGAAATTGTT GCATTATCTGGAGCACACACACTTGGAAGATCAAGACCTGACAGGAGTGGCTGGGGAAAG CCAGAAACAAAATATACTAAGGATGGGCCTGGTGAACCTGGAGGGCAATCATGGACAGTT GAATGGTTGAAGTTTGATAACAGTTACTTCAAGGACATAAAAGAGCAAAGGGACCAGGAT CTTCTAGTGCTACCCACAGATGCTGCATTATTTGAGGATCCGTCCTTCAAGGTATATGCC GAAAAATATGCAGAGGATCAGGAGGCATTCTTTAAAGACTACGCTGAAGCTCATGCTAAA CTGAGCGACCTTGGTGCAAAGTTCGATCCACCTGAGGGATTTTCACTGGACGATGAACCA GCCGTCGAAGAGAAGGATCCTGAACCAGCACCAGCGCCAGCAGCAGCACCACCACCTCCA CCAGTCGAGGAGAAGAAGGAAGCTGAACCAACTCCAGTACCAGTAACGGTAGGAGCAGCA GTGGCATCATCGCCAGCGGATGACAACAACGGTGCAGCACCGCAACCAGAGCCCTTCGTC GCTGCGAAATACTCCTACGGAAAGAAGGAGCTGTCGGACTCGATGAAGCAGAAGATCAGG GCGGAGTACGAGGGATTCGGAGGCAGCCCGGACAAGCCTCTGCAGTCCAACTACTTCCTC AACATCATGCTCTTGATCGGAGGGCTGGCCTTCTTGACGTCTCTGCTCGGGAGCTGA

Peptide Sequence

PEP ID	Os02t0553200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:20868385:20872077:-1 gene:Os02g0553200 transcript:Os02t0553200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 8 description:Thylakoid membrane-bound ascorbate peroxidase, Tolerance to bacterial blight, Response to NaCl (Os02t0553200-01)
Sequence	MAERIAASLLPAASPSPAPSPPPPRPRVSAAAAASFPCCSTSAGGLRLRSRPSRFPQKAA TTRSGRAGAGARAVVRCMAAAAVAASDAAQLKSAREDIREILKTTYCHPIMVRLGWHDSG TYDKNIEEWPQRGGADGSLRFDAELSHGANAGLINALKLIQPIKDKYPGITYADLFQLAS ATAIEEAGGPKIPMKYGRVDVTAAEQCPPEGRLPDAGPRVPADHLREVFYRMGLDDKEIV ALSGAHTLGRSRPDRSGWGKPETKYTKDGPGEPGGQSWTVEWLKFDNSYFKDIKEQRDQD LLVLPTDAALFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSDLGAKFDPPEGFSLDDEP AVEEKDPEPAPAPAAAPPPPPVEEKKEAEPTPVPVTVGAAVASSPADDNNGAAPQPEPFV AAKYSYGKKELSDSMKQKIRAEYEGFGGSPDKPLQSNYFLNIMLLIGGLAFLTSLLGS

Transcript Sequence

Transcript ID	Os02t0553200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20868385:20872077:-1 gene:Os02g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ASCORBATE PEROXIDASE 8 description:Thylakoid membrane-bound ascorbate peroxidase, Tolerance to bacterial blight, Response to NaCl (Os02t0553200-01)
Sequence	AAAAACTCACTCGACTCGAGCGCGCGCGCCATGGCGGAGCGCATCGCCGCCTCCCTCCTC CCGGCTGCCTCGCCCTCGCCTGCTCCGTCCCCTCCCCCCCCGCGCCCCCGCGTCTCCGCC GCGGCCGCCGCCTCCTTCCCATGCTGCTCCACCAGCGCCGGCGGCCTCCGCCTCCGCTCC CGCCCGTCTCGCTTCCCGCAGAAGGCTGCGACGACGAGGAGCGGGCGCGCCGGCGCGGGG GCGCGGGCGGTGGTCCGGTGCATGGCGGCGGCGGCGGTGGCGGCGTCCGACGCGGCGCAG CTCAAGAGCGCCCGGGAGGACATCAGGGAGATCCTCAAGACCACCTACTGCCACCCCATC ATGGTCCGTCTTGGGTGGCACGATTCTGGCACGTACGACAAGAACATCGAGGAGTGGCCG CAGAGGGGCGGAGCCGACGGGAGCTTGAGATTTGACGCCGAATTGAGCCACGGAGCCAAT GCTGGTCTGATTAATGCTTTGAAGCTTATCCAACCAATCAAGGACAAATACCCGGGTATA ACTTATGCTGATTTGTTCCAGTTGGCAAGTGCTACAGCAATTGAGGAAGCTGGTGGGCCG AAAATTCCAATGAAATATGGACGAGTTGATGTCACAGCAGCTGAGCAGTGCCCACCAGAG GGGAGGCTTCCTGATGCCGGTCCACGTGTGCCCGCTGATCATCTTAGGGAGGTATTCTAC AGGATGGGCCTTGATGACAAGGAAATTGTTGCATTATCTGGAGCACACACACTTGGAAGA TCAAGACCTGACAGGAGTGGCTGGGGAAAGCCAGAAACAAAATATACTAAGGATGGGCCT GGTGAACCTGGAGGGCAATCATGGACAGTTGAATGGTTGAAGTTTGATAACAGTTACTTC AAGGACATAAAAGAGCAAAGGGACCAGGATCTTCTAGTGCTACCCACAGATGCTGCATTA TTTGAGGATCCGTCCTTCAAGGTATATGCCGAAAAATATGCAGAGGATCAGGAGGCATTC TTTAAAGACTACGCTGAAGCTCATGCTAAACTGAGCGACCTTGGTGCAAAGTTCGATCCA CCTGAGGGATTTTCACTGGACGATGAACCAGCCGTCGAAGAGAAGGATCCTGAACCAGCA CCAGCGCCAGCAGCAGCACCACCACCTCCACCAGTCGAGGAGAAGAAGGAAGCTGAACCA ACTCCAGTACCAGTAACGGTAGGAGCAGCAGTGGCATCATCGCCAGCGGATGACAACAAC GGTGCAGCACCGCAACCAGAGCCCTTCGTCGCTGCGAAATACTCCTACGGAAAGAAGGAG CTGTCGGACTCGATGAAGCAGAAGATCAGGGCGGAGTACGAGGGATTCGGAGGCAGCCCG GACAAGCCTCTGCAGTCCAACTACTTCCTCAACATCATGCTCTTGATCGGAGGGCTGGCC TTCTTGACGTCTCTGCTCGGGAGCTGAGAGCGATGGTCTGATGACCTCCTCTGACGAGTG TTTTGAGTTGTTCTGCCTGTGCTAAGATTTGCGTGTTTCTCTTTCCATGTTTTGAGTCGT TATTCCGTAAATAAATTGAGGTAAAAGGATGGGCATGTGAATGGATTCCAGTACTTTCTG AACTTCTTGAGTAATTCCTCTAGAGAAATATTTGTCGGAGAGAAATGTCACATTATCTAG TTGTCATGGCTCATGACT