Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0552100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:20816006:20820554:1 gene:Os02g0552100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0552100-01)
Sequence	ATGGCGCCCGCGCTCCCCCGCCGCCTCCTCCCCTGGCTCCGGACCCCACCTTCCTCCTCC TCCGCCGCCGCCTTCTCGTCGGCGCCCTCCCGAGGCTGCCCGCTCCACGCCGCGCTCGCC CGCCGCGGCGCCCCGGCGGCCGCCTCCCTCGCCCTGTACGCCCGCATCCGCGAGGAGGCA TCGCCGCCCACCCCGTTCACCTTCTCCCTCCTCCTCGCCGCCCTCGCGTCGTCGTCGTCG TCTTCCCCGTCCCCTTCTCCGTCCGCAGGCTGCGCGCGCCTCGCCGCCGCGTGCCTCGCC CACGCTCAGGCGTTCAAGTGCGGCGCGCTCGCGCACCCCGTCGTCACCAACTCCCTCCTC AAGCTCTACTGCTCGCTGGGCCTCCTCGACCGCGCGCGCAGGGTGCTCTACTCCGGTGGT GCCGCGCTGGACGTCGTCTCGTGGAACACGATGGTGTCCGGGTACGGCAAGGGCGGGGAC CTGGGCGCTGCGCGGGAGGTGTTCGCCAGAATGCCCGAGCGGAACCTGGTTTCCTGGAGT GCCATGGTGGACGCGTGCGTGCGTGCCGGGGAGTTTGGGGAGGCTTTATGGGTGTTCGAT CGGATGATGCGGGAGGAATTCAGGCCAGATGTGGTGGTGCTGGTGAGCGTGCTCAAGGCA TGCGCGCATCTCGGCGCCGTTGAAAGGGGGCGTTGGGTTCATAGGTATCTGGAGACAGGG AGTTTTGGAGGTAGGCGTGGAAATCTCATGCTTGAGACAGCTCTTGTGGACATGTACTGC AAATGTGGGTGCATGGAGGATGCCTGGCAAGTTTTCGATGGAGTTCATCGTCGCGATGTG GTGTTGTGGAATGCGATGATCGGTGGGCTTGCGATGAATGGCTATGGTGAGCGTGCTCTC GAATTATTCCGAAGGATGCTTCAGAAGGGTTTCATGCCAAATGAGTCGACGTTTATTGCT GTTTTATGTGCATGCACCCATACAGGGCGTGTGGACGAAGGGAAAAGGGTTTTCAAGTCC ATGCAGGATTATGGCATTAAGCCACAAAGGGAGCACTATGGATGCTTAGCTGATCTCCTT GGCCGTGCAGGGAATGTAGAAGAAGCTGAAGCTCTGTTACTGGATATGCCAATGGAGCCA CATGCTTCTCAATGGGGTGCACTCATGTCATCATGCCAAATGCACAATGACATCAATGTG GGTGAGCGTGTGGGTAAGCGGCTTATTGAGCTAGAGCCATATGATGGTGGCCGTTATGTT GTTCTATTCAACCTATATGCTGTCAATGGTCGATGGGAAGAAGCAAGGACCATTCGGCAG ATGATGGAGGATAGGGGAGCCAAGAAAGAAACAGGTTTGAGCTTCATAGAGTTAAATGGT TTGGTCCATGAATTTATTTCCGGGGATACAAGACATCCTCTCACAAGGAAAATCTATGCA CTATTGGAAGATATAGAGAGGAGATTGCAACTAATTGGCTATGTTAAGGATACAAGCCAG GTGATTATGGACATGGATGATGAGGAAGATAAGGGCATCGCCCTATCCTACCACAGCGAG AGGCTGGCATTAGCATTTGGTATCTTAAACATTCCCCAGGGCGTTCCTATTCGTATTGTC AAGAACCTTCGAGTGTGCCGTGATTGCCATGTGCATTCCAAGCTTGTGTCCAAGCTCTAC GAGCGGGAGATCATTGTGCGTGACCGTCATCGTTTCCATGTGTTTCGTGATGGAGTATGC TCATGCAATGACTATTGGTGA

Peptide Sequence

PEP ID	Os02t0552100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:20816006:20820554:1 gene:Os02g0552100 transcript:Os02t0552100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0552100-01)
Sequence	MAPALPRRLLPWLRTPPSSSSAAAFSSAPSRGCPLHAALARRGAPAAASLALYARIREEA SPPTPFTFSLLLAALASSSSSSPSPSPSAGCARLAAACLAHAQAFKCGALAHPVVTNSLL KLYCSLGLLDRARRVLYSGGAALDVVSWNTMVSGYGKGGDLGAAREVFARMPERNLVSWS AMVDACVRAGEFGEALWVFDRMMREEFRPDVVVLVSVLKACAHLGAVERGRWVHRYLETG SFGGRRGNLMLETALVDMYCKCGCMEDAWQVFDGVHRRDVVLWNAMIGGLAMNGYGERAL ELFRRMLQKGFMPNESTFIAVLCACTHTGRVDEGKRVFKSMQDYGIKPQREHYGCLADLL GRAGNVEEAEALLLDMPMEPHASQWGALMSSCQMHNDINVGERVGKRLIELEPYDGGRYV VLFNLYAVNGRWEEARTIRQMMEDRGAKKETGLSFIELNGLVHEFISGDTRHPLTRKIYA LLEDIERRLQLIGYVKDTSQVIMDMDDEEDKGIALSYHSERLALAFGILNIPQGVPIRIV KNLRVCRDCHVHSKLVSKLYEREIIVRDRHRFHVFRDGVCSCNDYW

Transcript Sequence

Transcript ID	Os02t0552100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20816006:20820554:1 gene:Os02g0552100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os02t0552100-01)
Sequence	AGGATTCAAATTCGTTTGCGAGTCTCTTCGTTTTTACGTGGCGCGCCAAGGCTCAAACTT CTTTGCACCTCTGTTCTGAACGCAAGGTGTCCGCCATGGCGCCCGCGCTCCCCCGCCGCC TCCTCCCCTGGCTCCGGACCCCACCTTCCTCCTCCTCCGCCGCCGCCTTCTCGTCGGCGC CCTCCCGAGGCTGCCCGCTCCACGCCGCGCTCGCCCGCCGCGGCGCCCCGGCGGCCGCCT CCCTCGCCCTGTACGCCCGCATCCGCGAGGAGGCATCGCCGCCCACCCCGTTCACCTTCT CCCTCCTCCTCGCCGCCCTCGCGTCGTCGTCGTCGTCTTCCCCGTCCCCTTCTCCGTCCG CAGGCTGCGCGCGCCTCGCCGCCGCGTGCCTCGCCCACGCTCAGGCGTTCAAGTGCGGCG CGCTCGCGCACCCCGTCGTCACCAACTCCCTCCTCAAGCTCTACTGCTCGCTGGGCCTCC TCGACCGCGCGCGCAGGGTGCTCTACTCCGGTGGTGCCGCGCTGGACGTCGTCTCGTGGA ACACGATGGTGTCCGGGTACGGCAAGGGCGGGGACCTGGGCGCTGCGCGGGAGGTGTTCG CCAGAATGCCCGAGCGGAACCTGGTTTCCTGGAGTGCCATGGTGGACGCGTGCGTGCGTG CCGGGGAGTTTGGGGAGGCTTTATGGGTGTTCGATCGGATGATGCGGGAGGAATTCAGGC CAGATGTGGTGGTGCTGGTGAGCGTGCTCAAGGCATGCGCGCATCTCGGCGCCGTTGAAA GGGGGCGTTGGGTTCATAGGTATCTGGAGACAGGGAGTTTTGGAGGTAGGCGTGGAAATC TCATGCTTGAGACAGCTCTTGTGGACATGTACTGCAAATGTGGGTGCATGGAGGATGCCT GGCAAGTTTTCGATGGAGTTCATCGTCGCGATGTGGTGTTGTGGAATGCGATGATCGGTG GGCTTGCGATGAATGGCTATGGTGAGCGTGCTCTCGAATTATTCCGAAGGATGCTTCAGA AGGGTTTCATGCCAAATGAGTCGACGTTTATTGCTGTTTTATGTGCATGCACCCATACAG GGCGTGTGGACGAAGGGAAAAGGGTTTTCAAGTCCATGCAGGATTATGGCATTAAGCCAC AAAGGGAGCACTATGGATGCTTAGCTGATCTCCTTGGCCGTGCAGGGAATGTAGAAGAAG CTGAAGCTCTGTTACTGGATATGCCAATGGAGCCACATGCTTCTCAATGGGGTGCACTCA TGTCATCATGCCAAATGCACAATGACATCAATGTGGGTGAGCGTGTGGGTAAGCGGCTTA TTGAGCTAGAGCCATATGATGGTGGCCGTTATGTTGTTCTATTCAACCTATATGCTGTCA ATGGTCGATGGGAAGAAGCAAGGACCATTCGGCAGATGATGGAGGATAGGGGAGCCAAGA AAGAAACAGGTTTGAGCTTCATAGAGTTAAATGGTTTGGTCCATGAATTTATTTCCGGGG ATACAAGACATCCTCTCACAAGGAAAATCTATGCACTATTGGAAGATATAGAGAGGAGAT TGCAACTAATTGGCTATGTTAAGGATACAAGCCAGGTGATTATGGACATGGATGATGAGG AAGATAAGGGCATCGCCCTATCCTACCACAGCGAGAGGCTGGCATTAGCATTTGGTATCT TAAACATTCCCCAGGGCGTTCCTATTCGTATTGTCAAGAACCTTCGAGTGTGCCGTGATT GCCATGTGCATTCCAAGCTTGTGTCCAAGCTCTACGAGCGGGAGATCATTGTGCGTGACC GTCATCGTTTCCATGTGTTTCGTGATGGAGTATGCTCATGCAATGACTATTGGTGAAAAA GATTTTACATTATTGAGTATGATTGGAATCATGGACATCGTCAAAGGATGGCCAAAATAC TGGCCAAGGTATTTATGGTCGATATATCAGTAACCAAGATTGTAGGCATATTAATCCTCT TTTAAAATGGTGGATGGAACTATGATGAACTTTCGTGCAGGTGGTGGTAACTAATGAACT CTCAGGTTTGCCAACGCCTCTTGGGTGGATCTGTTTGAAACTGTAAGAGAACAAGATCAG TAGATCACTGTTCTTTCTGGAGTATCAGGATAATCAGTGTAGGCGGAGGCCGTTTCTTGC AGAGCTGATTAGTTTCTTTTCAAGCTTGTTTGCCTGAACTCCAAGGGATAGAAACGAGTG GACACGCTCGCCATCTTGGACTGATCACTGATTGCGTGCTGACGGTTGACATTTTCCATC GACGATGGAACTCGCGCGCTTTCGGTGTCAGGGGAATGGCGGGAAGGCAGACGATGGAAT CCAAGAGATGGAGGAGGAGCTTCCAGAACCCCTCGCTTCCACACTGAAGCTCTCCCCTTT GCTTTGCTTTCCTCACTCCATATGTGATTCCTTCCTTTTCCACCTCCACCCAAAAACTTT CCACCCACTCCACCTCTTCATCACACCCACTCTCTCTTTCTTTCTAATGGATTACTCGGG CGGCGGGCCGGCGCCGGCGCCGGCGACGGGGAGAGCGCGGGTGCGGGGGCGGTGGTGCTA CTGCCGCTGCTTCCGGCGGTGGGGCCGCTGCTTCTGCTGCTGCTACTGCTGCAACTCCTT CCCCCCCATCCAGGACGACCTCCGCGGCCCCGCCACCGCCGCCACCTGAGCCCCACGCCC TACAGAGATTTCGCCCCCAACACTTCCTACCACCTACCGTACCAGACACGTTAATCATGT AATCAAATGGTCGCCATGAGGACTGCACCAACCTTTGTTGCTATATAAACTAGGCAAGAC TACCTTTCTGTTCAGATGTGAGGGTATGCTAATATTCAGGAGTTATTTTGGACAATTACT GGACAAGAGATGTTCTTGGTAGCTGTTTAAAGTACTTGCTTGTAAGTTTAGTGAAAAGTC CATGGACATATTGCTTTACGGTAAATCTGTGAGGATGGATCAAGTGATCATTTCCATGGA CAGCAGAGTGTTTCCTGTAATATATAACAACTATACATATATGAAAATTACTTGTACATA AAGTGAATTATATCTGCT