Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0551900-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:20800953:20804395:1 gene:Os02g0551900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0551900-01)
Sequence	ATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAGGAT CTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTGTCA GCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACCACC GAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGGGCT CTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGTTGC GACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGAGAG AAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAATTTA AAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAATGT GCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAAAAG GGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCACTCC CATAATAGTCACACACCGAAACCGTCAGCAGCTCCACCCACTCCCTCAGCTGATCGCCCA TACGTCTGTCCTTATGATGGTTGTGCCAAGGCATACATTCATGAGTACAAACTTAACCTC CATCTGAAGAAAGAGCACCCTAATCACTACCAGGATGCCGGTGCTCAAGCCGCCTCTTCG AAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAGGTC CCTAAGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAGCAC CAGTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGAGAT AATGTTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACTGAG GACGAAGAATGA

Peptide Sequence

PEP ID	Os02t0551900-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:20800953:20804395:1 gene:Os02g0551900 transcript:Os02t0551900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0551900-01)
Sequence	MMQTAGRRRHRWVKEWVPQDLVVAGGPCALYKWVREDRLSALKSRDKEQEAELAKPEPTT EVLFLCSYEGCGKTFVDAGALRKHAHVHGERQYVCHYAGCDKKFLDSSKLKRHFLIHTGE KNFVCPHEGCGKAFSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQHEK GGLQNPGGSATNRSGLADHSHNSHTPKPSAAPPTPSADRPYVCPYDGCAKAYIHEYKLNL HLKKEHPNHYQDAGAQAASSKMSKRRSKPSLTAKMPLPKVPKRRGYTEPYQPPVSVVEEH QWPRNVLYEDDSEETEEEGDNVGDGARYRAASSDDDEETEDEE

Transcript Sequence

Transcript ID	Os02t0551900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20800953:20804395:1 gene:Os02g0551900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, C2H2-type domain containing protein. (Os02t0551900-01)
Sequence	AATCGCAACCGCAAGCCACCTTGCTCTGCTTGCTACTCTCGTTGTTGGCGCGGCGCGGCC CGGCCTTGGGGGGGGATGGATGGGGATGTGGCTGGGGTGGGAGTGGGAGCAGCCATAGAT TTCCTCCTCCTCCTCCTCCCTTAGCCGCCACCACCACCTCCCTCCACCACCATGCCGTCA CCATCCCAGCCGTCCTCCTCCTCCTCCCCCAAGCTTCTCAACCCTAGCCGCAACGCAAAC CCTCCACTCCTCCTCTCCCCTTAGCCCCCCCCTAACGCCGCCGCAAATTAACCGACGTCG ACGATGATGCAGACTGCCGGGCGCCGCCGCCACCGATGGGTCAAGGAGTGGGTTCCGCAG GATCTGGTCGTCGCCGGTGGCCCATGCGCGCTCTACAAATGGGTGCGAGAGGATAGGTTG TCAGCTCTCAAATCCAGGGACAAGGAACAAGAAGCAGAACTGGCAAAACCTGAACCAACC ACCGAGGTTCTCTTCCTGTGCAGCTATGAGGGCTGCGGGAAAACTTTTGTTGATGCAGGG GCTCTTAGGAAACATGCTCATGTTCACGGGGAGAGGCAGTATGTGTGTCACTATGCCGGT TGCGACAAGAAATTTTTAGACAGCTCTAAGCTGAAGAGGCATTTTCTTATTCATACAGGA GAGAAGAACTTTGTCTGCCCTCATGAAGGCTGTGGAAAGGCTTTCTCATTGGATTTTAAT TTAAAGGCACACATGAAAACACATTCTGTGGATAACTATCATGTGTGCAAGTACCCAGAA TGTGCTCGAAGGTTTACACAGGAATCAAAATTAAGGGCTCATATCAAGCAACAGCATGAA AAGGGTGGTCTCCAGAATCCAGGTGGGTCTGCAACAAACCGCAGTGGTCTAGCAGACCAC TCCCATAATAGTCACACACCGAAACCGTCAGCAGCTCCACCCACTCCCTCAGCTGATCGC CCATACGTCTGTCCTTATGATGGTTGTGCCAAGGCATACATTCATGAGTACAAACTTAAC CTCCATCTGAAGAAAGAGCACCCTAATCACTACCAGGATGCCGGTGCTCAAGCCGCCTCT TCGAAGATGTCGAAGCGAAGAAGCAAGCCCTCCTTGACGGCCAAGATGCCACTGCCCAAG GTCCCTAAGCGCAGGGGTTACACAGAGCCATACCAACCTCCTGTTAGTGTTGTCGAAGAG CACCAGTGGCCGAGGAATGTGCTGTACGAGGACGATAGCGAGGAGACTGAGGAAGAGGGA GATAATGTTGGGGACGGGGCGAGGTACAGAGCTGCTAGCAGCGACGACGATGAGGAGACT GAGGACGAAGAATGAGCTGCTCAGATCAGTCGTTTTTTCATCCAGTGCTTGTGCATATGA TTTACAAAATCTTAGCTTTTGGGTTATAGTTTTGCATACATGTACAATATTCAAAATAAG GCTGGGTAGTTGGTCAGAATTGAGAATTACCCCCCTTCCTTCTGAATTATGCAGGTTGGT AATGTTGGGCTGCTCCCATTAATCAAATTCAAAAGGACAATCAC