Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0549700-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:20652913:20654762:1 gene:Os02g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0549700-01);Hypothetical conserved gene. (Os02t0549700-02)
Sequence

CCTCTTCTCCTCCCGCATGGATCCCGTCATCTCCCCGCTCCCTGCTCGCGCGGATCCGCC
GCTAGCGACAACAGGAGGGGCGGACCCAGCAGCCTCTCCTACGGTGACTACAACGATTGG
TGGACGTGGGCTGACCCAGTTCCCGGCATCTGCTGCGGCGGCGACAGCGAAGTTGCCGAG
GATGGCATCACGTGCGACTTCCTGCTCAAGCTGCTCCGGGCGGGGAGCATGGTGGGTGCC
GACGCGGCTCTGCTGCAGGAGCTGGAATCCAGGGCGGTGCATACCTCGCCTAGTCAGCTC
TCGAGGCCGGGCTGCGGCCGACTGACTTCGAGGAGATCTCGCCCGCGCCGTGCTTGCCAA
CGACCGACGTCCTTGACTCGCCGTCAGTTCCAGCCATAA

Peptide Sequence

PEP ID

Os02t0549700-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:20652913:20654762:1 gene:Os02g0549700 transcript:Os02t0549700-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0549700-01);Hypothetical conserved gene. (Os02t0549700-02)
Sequence

PLLLPHGSRHLPAPCSRGSAASDNRRGGPSSLSYGDYNDWWTWADPVPGICCGGDSEVAE
DGITCDFLLKLLRAGSMVGADAALLQELESRAVHTSPSQLSRPGCGRLTSRRSRPRRACQ
RPTSLTRRQFQP

Transcript Sequence

Transcript ID

Os02t0549700-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:20652913:20654762:1 gene:Os02g0549700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os02t0549700-01);Hypothetical conserved gene. (Os02t0549700-02)
Sequence

GGTTCCCAGCCGGCGTTGCTGCTCTCCCTCTCTGCAAGGCAGCGTGTGGCAGCCGGCTGG
AGAGTAGCAGGGCTCGTTGGCCGGTGGGAGTAGAGTGGCTGCTCTTCTCTCCCTCCCAGA
TCTCCACCCCCTCGGCTCCGGCTCACTCGCCTCTGGCCGACGAGGAGGGCCACGGGCGGA
GCGAAGCGAAGCGGCGGACGGGCGAGCGAGGCGGGTGGGCGGGGAGCAAACCAACGGCGA
CCTCTTTCCCTCCCGCATGCATCCCGTTGTCTCTCCGCTGCCCTCTTGCGTGGATCTGCC
ACCGGCGCCTGGATCCCATCCTCTCCGCCCTCCCCTCGCGCGGATCCGCCATTGGCGTTG
ACGGGAGGGGTGGATCCGGTGACCTCTTCTCCTCCCGCATGGATCCCGTCATCTCCCCGC
TCCCTGCTCGCGCGGATCCGCCGCTAGCGACAACAGGAGGGGCGGACCCAGCAGCCTCTC
CTACGGTGACTACAACGATTGGTGGACGTGGGCTGACCCAGTTCCCGGCATCTGCTGCGG
CGGCGACAGCGAAGTTGCCGAGGATGGCATCACGTGCGACTTCCTGCTCAAGCTGCTCCG
GGCGGGGAGCATGGTGGGTGCCGACGCGGCTCTGCTGCAGGAGCTGGAATCCAGGGCGGT
GCATACCTCGCCTAGTCAGCTCTCGAGGCCGGGCTGCGGCCGACTGACTTCGAGGAGATC
TCGCCCGCGCCGTGCTTGCCAACGACCGACGTCCTTGACTCGCCGTCAGTTCCAGCCATA
ACCGCCTAGCATGGAAGCACACCAGATAAGCACATGGATTTTGTTGGGCTACTGTGTTGT
AACACAAGTTTGCCAAACATTTATGTGGCATCAACATCTATCTTGGAAGTTGAAGCTGTA
GATAAACATTATCAACAACAAAAGCAGGATGTATCTTCTCGAAAACAACGGAAAAAGATT
TGGATACATATTGGTATGAGCAGACAGACCTCAATCCCTGCACTGCACAACTGCATTGCT
CTTCGCAGGTGAAACGAATCTAGACATTACCACTATATGTTAATTAATTAGATGGTACTT
TTAGTTCATTCATAAACTACCTTACAAGTCTTGATTAATGGAAGTGTTTATGTTAGTAAT
TATTCAAGCTCCTTGGGTAGAATCTAATGAAATTGAAATTGC