Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0548700-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:20588289:20589687:-1 gene:Os02g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 43, U-box protein 43 description:Similar to ubiquitin-protein ligase. (Os02t0548700-00)
Sequence	ATGCCGGGGAGCGTGCCGCTGGCGCTGGGCCTGGACACGGCGGGGGTGCAGGTGCCCTGG TACTTCCGGTGCCCCATCTCCCTGGAGCTGATGCGCGACCCGGTGACGGTGTCCACCGGC CAGACCTACGACCGCGCCAGCATCGAGTCGTGGGTGGCCACCGGCAACACCACCTGCCCC GTCACCCGCTCCCCGCTCGACCGCGCCTTCACCCTCATCCCCAACCACACCCTCCGCCGC CTCATCCAGGACTGGTGCGTCGCCCACCGCTCCCTCGGCGTCGAGCGCATCCCCACCCCG AAGCAGCCAGCCGACCCCGACCTCATCCGCTCCCTCCTCGCCCAGTGCCCCGCGCTCCCG CCGCTCCGCAAGCTCAGGGCGCTCGCCCGGGACTCCGACAAGAACCGCCTCGTCATGGCC ACCCACGAGACACGGGCGGCGCTCGTTGACATGGCGTTTGGGACGAACGCTGGTGGGGAG GAGGTCGAGGCCGAGGCGATGGCGGTTCTTGCTATGGTTGGGTTGGGTGAGGCTGAGGCT GTGGAGGTGGTGGGGAGGAGGGAGAGGGTGGCGAGGCTCGGGGAGCTGCTGGTGAGTGGG GAAGGGGCGGCGACGACGACGGCGACGCTGGAGTGCAGGGTTAATGCTGGGGCTGTGGTG GAGGCGGTTGCGGCGGTGTCCGGCGCGGACGCCAGGGCGGTGCTGGGCGCGGCGGAGGGG GTCATGGAGGGGCTCGTCGCGCTGGTCGAGGAGAAGGCCCACGCGCGCGCCGTCCGCGTC GGGATCCGTGGACTGTTCGCGCTCTGCCTCGCCAAGGAGAACCGCCCCCGCGCCGTCGCC GCCGGTGCCGCGGCGGCGCTCGCGCGTCGCGTCGCGGAGGGAGGCGGTGGCGCGGGGGAG CCGGAGCGCGCGCTGGCCGCGGTGGAGCGGCTGTGCCGGACGGAGGGCGGGCGCGACGCG GTGGTCGCGGGCGCCGGGGGAGGCGCGGCGGCGGTGTGCGCGCTGGTGCGCGCCATGTCC GGGCGGTCAGCGGAGCACGCGGCGGGGGCGCTGGTGGCGGTGGTGGGCGGATCGGAGCCG CTCCAGGTGGAGGCGGTCCGCGCGGGCGCCATGAGCCAGCTCCTCCTCATGGTGCAGGGC GGGTGCTCGGAGCGGGCGAAGCGGAAGGCGCAGCACCTGCTCAAGCTGCTCCGGTCGGCG TGGCCCGCCGCCGACTCCATCGCCAACTCCGACGACTTCCTCCAACCATACTAA

Peptide Sequence

PEP ID	Os02t0548700-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:20588289:20589687:-1 gene:Os02g0548700 transcript:Os02t0548700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 43, U-box protein 43 description:Similar to ubiquitin-protein ligase. (Os02t0548700-00)
Sequence	MPGSVPLALGLDTAGVQVPWYFRCPISLELMRDPVTVSTGQTYDRASIESWVATGNTTCP VTRSPLDRAFTLIPNHTLRRLIQDWCVAHRSLGVERIPTPKQPADPDLIRSLLAQCPALP PLRKLRALARDSDKNRLVMATHETRAALVDMAFGTNAGGEEVEAEAMAVLAMVGLGEAEA VEVVGRRERVARLGELLVSGEGAATTTATLECRVNAGAVVEAVAAVSGADARAVLGAAEG VMEGLVALVEEKAHARAVRVGIRGLFALCLAKENRPRAVAAGAAAALARRVAEGGGGAGE PERALAAVERLCRTEGGRDAVVAGAGGGAAAVCALVRAMSGRSAEHAAGALVAVVGGSEP LQVEAVRAGAMSQLLLMVQGGCSERAKRKAQHLLKLLRSAWPAADSIANSDDFLQPY

Transcript Sequence

Transcript ID	Os02t0548700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20588289:20589687:-1 gene:Os02g0548700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 43, U-box protein 43 description:Similar to ubiquitin-protein ligase. (Os02t0548700-00)
Sequence	CCCACTCCTCACCTCCTCCTCCTCTCCACCCACCCACCAACCCACCCCACGCCGCGATTC CGCGAAGCTGAGCTGAGAATCGGATGCCGGGGAGCGTGCCGCTGGCGCTGGGCCTGGACA CGGCGGGGGTGCAGGTGCCCTGGTACTTCCGGTGCCCCATCTCCCTGGAGCTGATGCGCG ACCCGGTGACGGTGTCCACCGGCCAGACCTACGACCGCGCCAGCATCGAGTCGTGGGTGG CCACCGGCAACACCACCTGCCCCGTCACCCGCTCCCCGCTCGACCGCGCCTTCACCCTCA TCCCCAACCACACCCTCCGCCGCCTCATCCAGGACTGGTGCGTCGCCCACCGCTCCCTCG GCGTCGAGCGCATCCCCACCCCGAAGCAGCCAGCCGACCCCGACCTCATCCGCTCCCTCC TCGCCCAGTGCCCCGCGCTCCCGCCGCTCCGCAAGCTCAGGGCGCTCGCCCGGGACTCCG ACAAGAACCGCCTCGTCATGGCCACCCACGAGACACGGGCGGCGCTCGTTGACATGGCGT TTGGGACGAACGCTGGTGGGGAGGAGGTCGAGGCCGAGGCGATGGCGGTTCTTGCTATGG TTGGGTTGGGTGAGGCTGAGGCTGTGGAGGTGGTGGGGAGGAGGGAGAGGGTGGCGAGGC TCGGGGAGCTGCTGGTGAGTGGGGAAGGGGCGGCGACGACGACGGCGACGCTGGAGTGCA GGGTTAATGCTGGGGCTGTGGTGGAGGCGGTTGCGGCGGTGTCCGGCGCGGACGCCAGGG CGGTGCTGGGCGCGGCGGAGGGGGTCATGGAGGGGCTCGTCGCGCTGGTCGAGGAGAAGG CCCACGCGCGCGCCGTCCGCGTCGGGATCCGTGGACTGTTCGCGCTCTGCCTCGCCAAGG AGAACCGCCCCCGCGCCGTCGCCGCCGGTGCCGCGGCGGCGCTCGCGCGTCGCGTCGCGG AGGGAGGCGGTGGCGCGGGGGAGCCGGAGCGCGCGCTGGCCGCGGTGGAGCGGCTGTGCC GGACGGAGGGCGGGCGCGACGCGGTGGTCGCGGGCGCCGGGGGAGGCGCGGCGGCGGTGT GCGCGCTGGTGCGCGCCATGTCCGGGCGGTCAGCGGAGCACGCGGCGGGGGCGCTGGTGG CGGTGGTGGGCGGATCGGAGCCGCTCCAGGTGGAGGCGGTCCGCGCGGGCGCCATGAGCC AGCTCCTCCTCATGGTGCAGGGCGGGTGCTCGGAGCGGGCGAAGCGGAAGGCGCAGCACC TGCTCAAGCTGCTCCGGTCGGCGTGGCCCGCCGCCGACTCCATCGCCAACTCCGACGACT TCCTCCAACCATACTAACAACCGCCATTGCGGCCGGCGGCAGCGGCGGCGGTAGTAGCAA CCAAGCATCGACGACGGAG