Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0548100-00
CDS Infomation	cds chromosome:IRGSP-1.0:2:20562601:20565664:1 gene:Os02g0548100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 147 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0548100-00)
Sequence	ATGTCTCAGGAGGAGCAGCGCCATGGCCGCCAGCTGCCGCTAGCTACGAGTGGCGTCATC ACCTTCAACGGCGTGCCGCTCTCGCCGCTGACCGCCGGCGCCGAGAGCGACGGCGACGAC GACGACGTCGTCATCGTCGACGCGTGTAATAACGGGAAGAGGAAGGTCGGTGATGGGGAA GAAGAAGGGCGCGGATCCCAGGGCGGCGACGACGACGACGACGTCGTAGCTGTCCACGGC GGCGGCGGCGGCGGCGGCAACCGGGCGTGCATGTTCGCGGTGCGGGAGCGGGAGAGGCGG AGGCGGATGAACGACATGTTCGCCGGCATCCGCCGCCTCGTCCCCAACCTCCCGGAGAAG AGCAGCAGGGTGGAAATCATTGATGGCGCGATCGCTTACATCAAGATGCTGCAGGGGGAG GAGGTCAGGATGGAGGCGCAAAAGCAGGAGCTCCAGCGCGAGCGAGACCGCCTGGCAATG GAGGTGGCGGCGGCCGCCGGGGGCGCGGGGGCCTCCTCCTCCTCCTCGTCCGCCGCGGCG GCGGCGGTGACGGTGGCGGCGTACGGCCCCGCCGGCGCGGTGGGCTCCTCCTCCTCCTCG GCCGCCGCGGCGGCGCGCGCCAACACCGTCGTCCCAGTCCCACAGAGGGCGGCGCGCGGC GCCACGGCGCCGACGCCGCGTCCGGTCGCGCCGCCGCAGGCCGGGACGTGGCCTCTCCCG GCGCCCGCGGCGATGCCGCCGCCGCCGCCACCACCCACGGGCGCCGCGGCGGTCGCGCCG CCGCCGTCGCTCAAGACGTGGTCGTGGGGCGACAACGTCGTGGTCAGCGTGCTCGGCAAC ATCGGGAACATGACCGTGCGCGCGCCGCTGCGCCGCACCGGCGTGCTCGCCATGGCGTCC GCCGCGCTGAAGAGGTACAACATCACGGCAGTGACGTCGCTGAGCGGGACCGACGCTTCC CGGACCCAGAACATGTTCATGTTCTACACTATTATCGATATGCCGGACAGGCAGCCCCAG TTTGTGCACCCCAAGGTGTTCGAGGCCATGTACAGAGCGGCGGCCGCCGAGATCGCGGCC TGGATCAACTGCTACTGA

Peptide Sequence

PEP ID	Os02t0548100-00
PEP Infomation	pep chromosome:IRGSP-1.0:2:20562601:20565664:1 gene:Os02g0548100 transcript:Os02t0548100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 147 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0548100-00)
Sequence	MSQEEQRHGRQLPLATSGVITFNGVPLSPLTAGAESDGDDDDVVIVDACNNGKRKVGDGE EEGRGSQGGDDDDDVVAVHGGGGGGGNRACMFAVRERERRRRMNDMFAGIRRLVPNLPEK SSRVEIIDGAIAYIKMLQGEEVRMEAQKQELQRERDRLAMEVAAAAGGAGASSSSSSAAA AAVTVAAYGPAGAVGSSSSSAAAAARANTVVPVPQRAARGATAPTPRPVAPPQAGTWPLP APAAMPPPPPPPTGAAAVAPPPSLKTWSWGDNVVVSVLGNIGNMTVRAPLRRTGVLAMAS AALKRYNITAVTSLSGTDASRTQNMFMFYTIIDMPDRQPQFVHPKVFEAMYRAAAAEIAA WINCY

Transcript Sequence

Transcript ID	Os02t0548100-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20562601:20565664:1 gene:Os02g0548100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 147 description:Helix-loop-helix DNA-binding domain containing protein. (Os02t0548100-00)
Sequence	ATGTCTCAGGAGGAGCAGCGCCATGGCCGCCAGCTGCCGCTAGCTACGAGTGGCGTCATC ACCTTCAACGGCGTGCCGCTCTCGCCGCTGACCGCCGGCGCCGAGAGCGACGGCGACGAC GACGACGTCGTCATCGTCGACGCGTGTAATAACGGGAAGAGGAAGGTCGGTGATGGGGAA GAAGAAGGGCGCGGATCCCAGGGCGGCGACGACGACGACGACGTCGTAGCTGTCCACGGC GGCGGCGGCGGCGGCGGCAACCGGGCGTGCATGTTCGCGGTGCGGGAGCGGGAGAGGCGG AGGCGGATGAACGACATGTTCGCCGGCATCCGCCGCCTCGTCCCCAACCTCCCGGAGAAG AGCAGCAGGGTGGAAATCATTGATGGCGCGATCGCTTACATCAAGATGCTGCAGGGGGAG GAGGTCAGGATGGAGGCGCAAAAGCAGGAGCTCCAGCGCGAGCGAGACCGCCTGGCAATG GAGGTGGCGGCGGCCGCCGGGGGCGCGGGGGCCTCCTCCTCCTCCTCGTCCGCCGCGGCG GCGGCGGTGACGGTGGCGGCGTACGGCCCCGCCGGCGCGGTGGGCTCCTCCTCCTCCTCG GCCGCCGCGGCGGCGCGCGCCAACACCGTCGTCCCAGTCCCACAGAGGGCGGCGCGCGGC GCCACGGCGCCGACGCCGCGTCCGGTCGCGCCGCCGCAGGCCGGGACGTGGCCTCTCCCG GCGCCCGCGGCGATGCCGCCGCCGCCGCCACCACCCACGGGCGCCGCGGCGGTCGCGCCG CCGCCGTCGCTCAAGACGTGGTCGTGGGGCGACAACGTCGTGGTCAGCGTGCTCGGCAAC ATCGGGAACATGACCGTGCGCGCGCCGCTGCGCCGCACCGGCGTGCTCGCCATGGCGTCC GCCGCGCTGAAGAGGTACAACATCACGGCAGTGACGTCGCTGAGCGGGACCGACGCTTCC CGGACCCAGAACATGTTCATGTTCTACACTATTATCGATATGCCGGACAGGCAGCCCCAG TTTGTGCACCCCAAGGTGTTCGAGGCCATGTACAGAGCGGCGGCCGCCGAGATCGCGGCC TGGATCAACTGCTACTGA