Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0542200-02
CDS Infomation	cds chromosome:IRGSP-1.0:2:20135583:20140490:-1 gene:Os02g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.9 protein. (Os02t0542200-01);Similar to H0525E10.9 protein. (Os02t0542200-02)
Sequence	AATAATTTAGGTAACACAGCTGTTGAGGACAGCGAAGCAGGTCCTTGCATTCCCAGACTC CAAGCAGCGACTGGAGATTATACACCATGGTTAGGGCAAGAGTTTGCGTCTGAACATGAA GCATATGAATTCTATCGCTATTACGCATGGAAGTTGGGGTTCAGTGTCCGAAGAGAATAT GCAAACAAAAGTAGGAAAACTGGTGAAATAACCTCAAGAAAGTTTGTTTGTTCGAGGGAA GGATTCAAAGCCCCAGACAAACGAACCAACCATACGAGGACTCCACAGCCTGATACAAGA ACAGGATGCCACGCTAATTTAGTCATCAGGCGCAAAAATGATACTTCAAAGTATGAGGTA TATGCTTTCGAGGCACAGCATAATCATCCCTTGTTCATTCCATCCTGTGCAAATCCACTG CAAAAAAAGTTAAGTGATGTTCAGTCTTCTGATGCTGATAACTCTGCTAGTGTAACACAT GCTAGCGAACCTGATAGCAGAAATTCCATTCTTGCCGAGAAAACTATTAAGTCCCCAGAA ATCTCTCAGCGCTCTCTGCATACTAGGCGGCAGCGGGAAATTAAGTGTGGGGAAGCCAGT GCTCTGTTAAACTACCTCCAGGATCAATGTCGAGCAGATCCTTTATTTTATCATGCTGTA CAGCTGGATGCTGAAGATAAAGTTACAAACATTTTCTGGGCCGATGCAAAGATGGTAATT GATTTTGGTCAATTTGGTGATGTTGTTTCCTTTGATATTGTCCCCAGAAACAACATGAAT CTCCGACCTTTTGCTTCTTTTGTTGGATTTAACAATTATGGGGAGACTGTTTTGCTTGGA ATGGCACTTATGTATGATGATAGCCTTGAATCATTCCAGTGGTTGTTTGAGACCTTCTTG CATGCGATGTCTGGACAAGCACCGCGGACTGTCTTTTCACGCCAAGACGCAATTGTATCA AAGGCCATCTCACTGGTGATGCCTGACACATGCCATGCCATATGTACATGGAACCTGAAG CAGTCTGCAAAAAGTAACCTCAATCACCTTATTAGAGGGGATTGTGGTTTCATAAAGGAA TTCAAGGCATGCATCAATGATTATGAGGAGGAGGTGGAGTTTTTTACTGCTTGGGAAGCT ATGATCAGTAAATATAACCTTCACAACAACGTGTGGTTGCAGAAGGTATTTGAAGAAAAA GAGAAGTGGGCTAGGCCATACACAAAGTGGATATTTTCAGCTGGGATGAAGAACACACAA TTAAATGAACGTCTACATTCTGACGTTCGGGATTATTTGAAATCTGATGTAGATATTATT TCGTTCTTGAAGCATCTTAAGAAATTGGTCAATGATAGACGGTACATAGAATTGGAGGTT GAATTTAGTTCGAGGCTCAAGTTGCCAGACTTCAAGATTAGAGCTCCTATTCTGAGACAA GCTTCTGAGGCCTATACTGGTATGATATTTCAGCTTTTCCAAGAAGAATACGAAGAGTTT CAGTCAGCTTACATTGTGACTCGTGATGAAAGTGGTCCCAGCCGTGAATATATTGTTGCC ATTCTTGAGAAAGAAAGACGGTATAAAGTTCATGGAAACCCTTGTGAGCAGACAGTTACA TGCTCATGTAGGAAGTTTGAGACACTTGGTTTCCTGTGTAGCCATGCTTTGAAAGTTTTA GATACAATGGACATAAAGTATATGCCTGATAGGTACATCCTGAAGCGATGGACCAAATAT GGAAGGTGTTTGACTGCACCGCAGGTTGAAGGTCGAAAGGTTCAGGCAGATACCACATTA GAATTTTCTAGCCGCTATGAATACTTGTGCCCAGTATATGTTAGGCTTGTTGCTCGAGCA TCAGAATGCGAGGAGTCGTACAGAGTATTAGATCAATGTTCAGTAGAACTGGGTAAGAAA ATTGAAGAAATCCTGCAGAAACAAACAAGCATTGATGCGTCAGCTCCTCAGTCTGATATT GAGGATGTAACAATATCCTTGTCTGCGAATGGTACTGACAATGAATCAGAAAGAGCACTG GATTATTCAAGCAGCACAAGACCGAAGCGACGAAAAAAGAAAGGTCGTAATGCTAAAAGC CAACGAAAAAGTTGTATTGAGAAAGGTTTACAAAAAACCAAGAAAGTGCAACCAGAACAA TCCCCAATACAATATACCATGTTGGATGCTGCTCAACCTGGAAATGTTCTATTTCAGGGT CTTGACATTTCTAATCCATTTCCAATGGGGCAACTGAATTATGGAGGAGTGCAGTCACAA CCAGGCCTATGCCCAAGCTTACCTACTGTATCAAGAGTATTGTCAATTGCCTGTTACTCT CTTTTTGATAAGAAATGGTGCCCCTTGCGCCGTATCTGA

Peptide Sequence

PEP ID	Os02t0542200-02
PEP Infomation	pep chromosome:IRGSP-1.0:2:20135583:20140490:-1 gene:Os02g0542200 transcript:Os02t0542200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.9 protein. (Os02t0542200-01);Similar to H0525E10.9 protein. (Os02t0542200-02)
Sequence	NNLGNTAVEDSEAGPCIPRLQAATGDYTPWLGQEFASEHEAYEFYRYYAWKLGFSVRREY ANKSRKTGEITSRKFVCSREGFKAPDKRTNHTRTPQPDTRTGCHANLVIRRKNDTSKYEV YAFEAQHNHPLFIPSCANPLQKKLSDVQSSDADNSASVTHASEPDSRNSILAEKTIKSPE ISQRSLHTRRQREIKCGEASALLNYLQDQCRADPLFYHAVQLDAEDKVTNIFWADAKMVI DFGQFGDVVSFDIVPRNNMNLRPFASFVGFNNYGETVLLGMALMYDDSLESFQWLFETFL HAMSGQAPRTVFSRQDAIVSKAISLVMPDTCHAICTWNLKQSAKSNLNHLIRGDCGFIKE FKACINDYEEEVEFFTAWEAMISKYNLHNNVWLQKVFEEKEKWARPYTKWIFSAGMKNTQ LNERLHSDVRDYLKSDVDIISFLKHLKKLVNDRRYIELEVEFSSRLKLPDFKIRAPILRQ ASEAYTGMIFQLFQEEYEEFQSAYIVTRDESGPSREYIVAILEKERRYKVHGNPCEQTVT CSCRKFETLGFLCSHALKVLDTMDIKYMPDRYILKRWTKYGRCLTAPQVEGRKVQADTTL EFSSRYEYLCPVYVRLVARASECEESYRVLDQCSVELGKKIEEILQKQTSIDASAPQSDI EDVTISLSANGTDNESERALDYSSSTRPKRRKKKGRNAKSQRKSCIEKGLQKTKKVQPEQ SPIQYTMLDAAQPGNVLFQGLDISNPFPMGQLNYGGVQSQPGLCPSLPTVSRVLSIACYS LFDKKWCPLRRI

Transcript Sequence

Transcript ID	Os02t0542200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:20135583:20140490:-1 gene:Os02g0542200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to H0525E10.9 protein. (Os02t0542200-01);Similar to H0525E10.9 protein. (Os02t0542200-02)
Sequence	TTTTTGGGCTTCAAAACCTCAAGCTGCTCGGGCGTTGGACCTGTCGATGGCTTCGGATTT TAGGTGGAAGGAGAGCACCGGTCCCTCGAATCGTAGCATTCGCTTTGTACGGCCCTAACG GTATCGTTTTTGGTTGCAGATGTCGTTGTTGATGTGCGCTTAGCTCAAACCCTAGCTGTA CACTCAAAATTGGGTCTGAAATTCGATCTGTTTTTTTACTCAAAGTTGCAGGGAGAATAA AGAGTAAAATGTTTTATTAGGGCTTCTTGAAGAATGTGCAACGCGATTGGGTGTTGCAGG GAGAATAGTGCACTAGTGCCGGTAAATTATTGTCTTTCATCAAATTGTGGCATTTGCGGT TGCAAATTGATAATAGTGCCCAAGTAAGACCGTGCCACACTTAATAAACCGCAAGATATC CATTATGTTTGCACATGACTTTCTAGTTGATCATATTCTTGATTTTCAATTGTCCTATGC AGATACGTTTGCATTTTGATCATGCTTTTAGATTTAAATTCCTTCTTAAAATAATTTAGG TAACACAGCTGTTGAGGACAGCGAAGCAGGTCCTTGCATTCCCAGACTCCAAGCAGCGAC TGGAGATTATACACCATGGTTAGGGCAAGAGTTTGCGTCTGAACATGAAGCATATGAATT CTATCGCTATTACGCATGGAAGTTGGGGTTCAGTGTCCGAAGAGAATATGCAAACAAAAG TAGGAAAACTGGTGAAATAACCTCAAGAAAGTTTGTTTGTTCGAGGGAAGGATTCAAAGC CCCAGACAAACGAACCAACCATACGAGGACTCCACAGCCTGATACAAGAACAGGATGCCA CGCTAATTTAGTCATCAGGCGCAAAAATGATACTTCAAAGTATGAGGTATATGCTTTCGA GGCACAGCATAATCATCCCTTGTTCATTCCATCCTGTGCAAATCCACTGCAAAAAAAGTT AAGTGATGTTCAGTCTTCTGATGCTGATAACTCTGCTAGTGTAACACATGCTAGCGAACC TGATAGCAGAAATTCCATTCTTGCCGAGAAAACTATTAAGTCCCCAGAAATCTCTCAGCG CTCTCTGCATACTAGGCGGCAGCGGGAAATTAAGTGTGGGGAAGCCAGTGCTCTGTTAAA CTACCTCCAGGATCAATGTCGAGCAGATCCTTTATTTTATCATGCTGTACAGCTGGATGC TGAAGATAAAGTTACAAACATTTTCTGGGCCGATGCAAAGATGGTAATTGATTTTGGTCA ATTTGGTGATGTTGTTTCCTTTGATATTGTCCCCAGAAACAACATGAATCTCCGACCTTT TGCTTCTTTTGTTGGATTTAACAATTATGGGGAGACTGTTTTGCTTGGAATGGCACTTAT GTATGATGATAGCCTTGAATCATTCCAGTGGTTGTTTGAGACCTTCTTGCATGCGATGTC TGGACAAGCACCGCGGACTGTCTTTTCACGCCAAGACGCAATTGTATCAAAGGCCATCTC ACTGGTGATGCCTGACACATGCCATGCCATATGTACATGGAACCTGAAGCAGTCTGCAAA AAGTAACCTCAATCACCTTATTAGAGGGGATTGTGGTTTCATAAAGGAATTCAAGGCATG CATCAATGATTATGAGGAGGAGGTGGAGTTTTTTACTGCTTGGGAAGCTATGATCAGTAA ATATAACCTTCACAACAACGTGTGGTTGCAGAAGGTATTTGAAGAAAAAGAGAAGTGGGC TAGGCCATACACAAAGTGGATATTTTCAGCTGGGATGAAGAACACACAATTAAATGAACG TCTACATTCTGACGTTCGGGATTATTTGAAATCTGATGTAGATATTATTTCGTTCTTGAA GCATCTTAAGAAATTGGTCAATGATAGACGGTACATAGAATTGGAGGTTGAATTTAGTTC GAGGCTCAAGTTGCCAGACTTCAAGATTAGAGCTCCTATTCTGAGACAAGCTTCTGAGGC CTATACTGGTATGATATTTCAGCTTTTCCAAGAAGAATACGAAGAGTTTCAGTCAGCTTA CATTGTGACTCGTGATGAAAGTGGTCCCAGCCGTGAATATATTGTTGCCATTCTTGAGAA AGAAAGACGGTATAAAGTTCATGGAAACCCTTGTGAGCAGACAGTTACATGCTCATGTAG GAAGTTTGAGACACTTGGTTTCCTGTGTAGCCATGCTTTGAAAGTTTTAGATACAATGGA CATAAAGTATATGCCTGATAGGTACATCCTGAAGCGATGGACCAAATATGGAAGGTGTTT GACTGCACCGCAGGTTGAAGGTCGAAAGGTTCAGGCAGATACCACATTAGAATTTTCTAG CCGCTATGAATACTTGTGCCCAGTATATGTTAGGCTTGTTGCTCGAGCATCAGAATGCGA GGAGTCGTACAGAGTATTAGATCAATGTTCAGTAGAACTGGGTAAGAAAATTGAAGAAAT CCTGCAGAAACAAACAAGCATTGATGCGTCAGCTCCTCAGTCTGATATTGAGGATGTAAC AATATCCTTGTCTGCGAATGGTACTGACAATGAATCAGAAAGAGCACTGGATTATTCAAG CAGCACAAGACCGAAGCGACGAAAAAAGAAAGGTCGTAATGCTAAAAGCCAACGAAAAAG TTGTATTGAGAAAGGTTTACAAAAAACCAAGAAAGTGCAACCAGAACAATCCCCAATACA ATATACCATGTTGGATGCTGCTCAACCTGGAAATGTTCTATTTCAGGGTCTTGACATTTC TAATCCATTTCCAATGGGGCAACTGAATTATGGAGGAGTGCAGTCACAACCAGGCCTATG CCCAAGCTTACCTACTGTATCAAGAGTATTGTCAATTGCCTGTTACTCTCTTTTTGATAA GAAATGGTGCCCCTTGCGCCGTATCTGAATATTGAAAAAATTACTTACACGGTCATTGCT TTCAGGAACTTGGTTTTGCTGCATACCTTTCTCAGCCATCAAGTAACAATCAACATAATC AGCAGGTATAAATTGGTAAAGTTTCACAGTTGTCTCTTTCCTCACTTTCATGTTGATGAA GCTTTGAAGTTGCCACCTCCTTACTTTCTAATTTAATAAAGTGTTTAGATTTTTTAACTC TCGTGTAGCTCCATCCACTTTGGATTTTGCACTTGGCAATTTAGATTCTGAAAAAAACTA TACATATAGAGCATTTTAAGGTACGTTTACATGCAGATATGATCAATTTGTGCTATACGA GAAAGAAAACTAAATCGTCTTATCTTTCATCAAAGAAAGAAAGCTGATCTATCTTTACAT AATTTTTGTTGCACACCTATACATGATTATATCTTTACATAATTTTGTGTGTGAATATAG GTCAACATGCTATAAATGTTTTTATTTTCAGAATTTCCTAAAGTCACAATGTGCAAGAAT TGAAAAATGGCTGTAGCTACACATGGGTATAGCAGGATCTTTATCTTTAATTAAACTCAG CTTTTTGTTAATCATGGCCCACGTCACTGCTCTGTTGGCCATTAAGCAGTTAATGGATGA AGTTGCTAGTTTATTTCTGCTGTTTATTGTCCATCTTTTCAGGGTTTGTAGAAATCAACA GCTCTGTTGAAAATCATAGTGCACATTTGTTTCAATCTTCAATATAACTCTTGGGACAGA ACTGGCCCTCTGTTGAAGATCAAATCAACTTCTCAAATTCATATCAGTCAGTAATTGAGG CTACCAAGAACAGCCATTTACCTGGGTACATCCATCAGCAGCATGTTCAAGCCATGCTAC GCAGCATGACTAGCTGACGATTAGCAGTGATAGCGCTCACCAAGTTCCAGAGTGACAGCC ACTTGGTGTTGTGTTGATTAGCAATTTGAATGTTAAATTCTCCCGCATATCGCTCATCAA TTGTGACATACCAAGCCACCAAGGACATTCAGAGCACATCCATGATCTATCGTCAGTAGC CAACGAAGTGTTAGCTCTCTTGCAATCGTCGGATGGTGGATGGTGCAGAACTGTAGACTA TTTTGTAGCCTGTATGTGAACATGATTACATGAACCATGTAGGACTAGTCTGTAGAACAG AGTAGAGAACTAGAGATGATATCTTTGGAAGGATTAGATTTCATGCCACTCTTAGAGTTG CAGGTTTAGAAATATGCCATTATGATGGGGATATGTCAATAGCATAAGCTCATTTGTACA AGCTTGTCACACTTGTGCTTTGATTGTATAAATGCTAGGAGATGTGTCTATTTTGTC