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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0541900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:20131802:20132893:1 gene:Os02g0541900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA63 description:Conserved hypothetical protein. (Os02t0541900-01)
Sequence

ATGGGTTCTTCCGTCGGTGCCACTATTTTCTACTGCGTCGCATTGTCCATGGTCATCGTG
ATGACCCAATTGCCCCCCACCGAAGCAGACTCTGTAGCAGCGGCAGAGTTCGCGTCCTCC
GACCTGAAGGCGGACAAGTTGACCTCGCGCAAGCTGATGGGCGCCGCTAACGCGCCGGCG
CCGGCGCCGCTAGGGATGTGCCCAGTGCGGTTCGACGAGATGAAGGGGCCATTCACCGAG
CTAGGAAAGAAGTGCAAGGCGGCATCGGTGACGGAGTGTTGCGACGCGTTCAAGGAGATC
GCGTGCCCACACAACACGCTGCTCAACGACCTCAACAATGGGTGTGGGGACGATATGTTC
TACTTCATCCACACCTACGGCCGCCTGCCGCCCGGAACCATCTTCAAGAAATGTGTCGAG
GGACCCTATGGGATGAAGTGCTGA

Peptide Sequence

PEP ID

Os02t0541900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:20131802:20132893:1 gene:Os02g0541900 transcript:Os02t0541900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA63 description:Conserved hypothetical protein. (Os02t0541900-01)
Sequence

MGSSVGATIFYCVALSMVIVMTQLPPTEADSVAAAEFASSDLKADKLTSRKLMGAANAPA
PAPLGMCPVRFDEMKGPFTELGKKCKAASVTECCDAFKEIACPHNTLLNDLNNGCGDDMF
YFIHTYGRLPPGTIFKKCVEGPYGMKC

Transcript Sequence

Transcript ID

Os02t0541900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:20131802:20132893:1 gene:Os02g0541900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsSTA63 description:Conserved hypothetical protein. (Os02t0541900-01)
Sequence

TTTTCTCTCGTAATTAAATTTGACAGGCATGGGTTCTTCCGTCGGTGCCACTATTTTCTA
CTGCGTCGCATTGTCCATGGTCATCGTGATGACCCAATTGCCCCCCACCGAAGCAGACTC
TGTAGCAGCGGCAGAGTTCGCGTCCTCCGACCTGAAGGCGGACAAGTTGACCTCGCGCAA
GCTGATGGGCGCCGCTAACGCGCCGGCGCCGGCGCCGCTAGGGATGTGCCCAGTGCGGTT
CGACGAGATGAAGGGGCCATTCACCGAGCTAGGAAAGAAGTGCAAGGCGGCATCGGTGAC
GGAGTGTTGCGACGCGTTCAAGGAGATCGCGTGCCCACACAACACGCTGCTCAACGACCT
CAACAATGGGTGTGGGGACGATATGTTCTACTTCATCCACACCTACGGCCGCCTGCCGCC
CGGAACCATCTTCAAGAAATGTGTCGAGGGACCCTATGGGATGAAGTGCTGAGCTCGGTC
CATATCACTCCATTGTTGCTAGCTTTTGGCCTGATTTGTACTCTACCTAACAACAAATGA
CCCTTTCGCTGCCTTGCAATGTAATTAAGAACTGTGTATAATTAAACTTGCTTTTATTAC
TTCAAAATGCATTGCACTACAAAAGGTTTATTAT