Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0541500-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:20118183:20118829:1 gene:Os02g0541500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0541500-00)
Sequence

ATGCAGGAAGGTTACGTGTACTCGAGGAGGGCGATGCTGCTGGCTCCGGCGTACGGACAC
GGGGATAGCTCCGCCGCCGCCGCCGCGGCCGGGGCGAGCCAGGTGATTGCCGGACAGGAG
GCGCCGGCCGGCGGCGACGTCGTGGCGGGGCCCGCCGGGACGAGCAGCTTCGACGCGAAC
GTGGTGATGATCCTGGCCGTGCTCCTGTGCGCGCTCATCTGCGCGCTGGGGCTCAACTCG
ATCGTGCGGTGCGCGCTCCGGTGCTCGAGCGGCGGCCGGATGATGATGTCTTCGTCGTCG
TCGGCGGCGGCGGGAGATGACGGCGAGCTGGGTCCGTCGGCGGCGGCGCAGGCCGCCGGG
GTGCGGCGGAAGGCGCTGCGGGCGATGCCGACGATGGTGTACTCGGCGGCGGGCGGGCCG
AGCCCGGCGTGCGCCATCTGCCTCGCCGACCTGGAGCCCGGCGAGCGCGTGCGCGTGCTG
CCCAAGTGCAACCACGGCTTCCACGTCCGCTGCGTCGACCGCTGGCTCCTCGCGCGCTCC
ACCTGCCCGACGTGCCGGCAGCCGCTGTTCGCCACGCCGCCGGTCCGGCCGTTCCTCGCG
CCTCTCCGGCCGGAAGGCTTCGTCACGCCGTACGATTTTTAA

Peptide Sequence

PEP ID

Os02t0541500-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:20118183:20118829:1 gene:Os02g0541500 transcript:Os02t0541500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0541500-00)
Sequence

MQEGYVYSRRAMLLAPAYGHGDSSAAAAAAGASQVIAGQEAPAGGDVVAGPAGTSSFDAN
VVMILAVLLCALICALGLNSIVRCALRCSSGGRMMMSSSSSAAAGDDGELGPSAAAQAAG
VRRKALRAMPTMVYSAAGGPSPACAICLADLEPGERVRVLPKCNHGFHVRCVDRWLLARS
TCPTCRQPLFATPPVRPFLAPLRPEGFVTPYDF

Transcript Sequence

Transcript ID

Os02t0541500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:20118183:20118829:1 gene:Os02g0541500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os02t0541500-00)
Sequence

AGAGAATGCAGGAAGGTTACGTGTACTCGAGGAGGGCGATGCTGCTGGCTCCGGCGTACG
GACACGGGGATAGCTCCGCCGCCGCCGCCGCGGCCGGGGCGAGCCAGGTGATTGCCGGAC
AGGAGGCGCCGGCCGGCGGCGACGTCGTGGCGGGGCCCGCCGGGACGAGCAGCTTCGACG
CGAACGTGGTGATGATCCTGGCCGTGCTCCTGTGCGCGCTCATCTGCGCGCTGGGGCTCA
ACTCGATCGTGCGGTGCGCGCTCCGGTGCTCGAGCGGCGGCCGGATGATGATGTCTTCGT
CGTCGTCGGCGGCGGCGGGAGATGACGGCGAGCTGGGTCCGTCGGCGGCGGCGCAGGCCG
CCGGGGTGCGGCGGAAGGCGCTGCGGGCGATGCCGACGATGGTGTACTCGGCGGCGGGCG
GGCCGAGCCCGGCGTGCGCCATCTGCCTCGCCGACCTGGAGCCCGGCGAGCGCGTGCGCG
TGCTGCCCAAGTGCAACCACGGCTTCCACGTCCGCTGCGTCGACCGCTGGCTCCTCGCGC
GCTCCACCTGCCCGACGTGCCGGCAGCCGCTGTTCGCCACGCCGCCGGTCCGGCCGTTCC
TCGCGCCTCTCCGGCCGGAAGGCTTCGTCACGCCGTACGATTTTTAA