Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0539200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19981534:19983176:-1 gene:Os02g0539200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 33, U-box protein 33 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0539200-01)
Sequence	ATGGAGGAGGCGGCGGCGGAGGTGCCGTCCTACTTCCTGTGCCCGATCTCGCTGGAGATC ATGAGGGACCCGGTGACGCTGGCGACGGGGATCACCTACGACCGGAGCAGCATCGAGCGG TGGATGTTCGGCGGCGGCGGCGGCGACGGGGGGAAGGGGACGTGCCCGGTGACGCGGCGG CAGCTGGCGCCGGCGGAGCGGGAGGCGACGCCCAACCACACGCTGCGGCGGCTCATCCAG GCGTGGTGCGCCGCGCACGCCGTCGAGAGGTTCCCCACCCCGCGCCCGCCCGTCGACTCC TGCCGCGTCGCCGCGCTCGTCGACGAGGGGACGACGACGATGCTCGGCGGCGGCGGCAGG CAGCGGCAGCTCGCCGCGCTCCGGGAGATCAAGGCCATCGCCGCCGAGAGCGACCGCAAC AAGCGCTGCGTCGAGGCCACGCCCGGCGCCGTCGAGTTCCTCGTCTCCGTCGTCGTCCAG AGCCATGCCGCCGCCTCCACCTCAGCCAGCTCGGACGACGACGACCTGTTCGACTCGGTG ATCGATTCCCCCATGTCGACGAGCTCGCCGGAGGAGGAGGCCCTGGGCGTGCTCTACTCC CTCAAGCCGTCCGAGCCCACCCTGCGCCGCGTCCTCGGCAAGGACAATGGCGTCGGCTTC CTCGACACCCTCGCCTCCGTGCTCCGCCGCCCGAGCTACCGTTCGCGCGCGTATGCCATC CTCCTCCTGAAGGCGGTGACGTCGGCGATGCCGCCGGAGCGGCTGATGGCGGTGAGCCCC GAGCTGGTGGAGGAGGTGGTCCGGGTGGTGTCCGACGGCGTGTCGTCGAAGGCGGTGAAG GCGGCGCTGCACGTGCTGTGCCGGCTGTGCCCGTGGGGGCGGAACCGCGTGAAGGCGGTG GAGGCCGGCGCGGTGGCGGCGCTGGTGGAGCTCCTCCTCGACGAGGAGGGCGGCGGCGGG CGGCGGCGCGCGGCGGAGCTGGCGGTGGTGGCGATCGACCACCTGTGCGGGTGCGCGGAG GGGAGGTCGGAGCTGGTGGCGCACCCGGCGGGGCTCGCCGTGGTGTCCAAGAGGGCGATG CGGGTGTCGCCGGCGGCCACCGAGAGCGCCGTGCGCGCGCTCCACGCCGTCGCGAGGAAC GCGGCGACGCCGGCCGTGCTGCAGGAGATGCTCGCCGTCGGCGTGGTGGCGAAGCTGCTG CTGGTGCTGCAGGCGGACGGCGGCGAGCGCGCCAGGGCGAGGGCGAGGGAGATGCTCAGG GCGAACGCTAGGGTTTGGAAGGACTCGCCATGCTTGCAAGCTCACCTTAAGGCTTCTTAC CCCTCCTGA

Peptide Sequence

PEP ID	Os02t0539200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19981534:19983176:-1 gene:Os02g0539200 transcript:Os02t0539200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 33, U-box protein 33 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0539200-01)
Sequence	MEEAAAEVPSYFLCPISLEIMRDPVTLATGITYDRSSIERWMFGGGGGDGGKGTCPVTRR QLAPAEREATPNHTLRRLIQAWCAAHAVERFPTPRPPVDSCRVAALVDEGTTTMLGGGGR QRQLAALREIKAIAAESDRNKRCVEATPGAVEFLVSVVVQSHAAASTSASSDDDDLFDSV IDSPMSTSSPEEEALGVLYSLKPSEPTLRRVLGKDNGVGFLDTLASVLRRPSYRSRAYAI LLLKAVTSAMPPERLMAVSPELVEEVVRVVSDGVSSKAVKAALHVLCRLCPWGRNRVKAV EAGAVAALVELLLDEEGGGGRRRAAELAVVAIDHLCGCAEGRSELVAHPAGLAVVSKRAM RVSPAATESAVRALHAVARNAATPAVLQEMLAVGVVAKLLLVLQADGGERARARAREMLR ANARVWKDSPCLQAHLKASYPS

Transcript Sequence

Transcript ID	Os02t0539200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19981534:19983176:-1 gene:Os02g0539200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:plant U-box-containing protein 33, U-box protein 33 description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os02t0539200-01)
Sequence	CATTCCCTTCAACTCAAACTCCTCTTCTTCTTCTTCCTCCCATCGATCTCTCTCCTTCGC GATCAACTCGAGCTCGAACTCGTCTCGTGGTAGTAGCGAGCATGGAGGAGGCGGCGGCGG AGGTGCCGTCCTACTTCCTGTGCCCGATCTCGCTGGAGATCATGAGGGACCCGGTGACGC TGGCGACGGGGATCACCTACGACCGGAGCAGCATCGAGCGGTGGATGTTCGGCGGCGGCG GCGGCGACGGGGGGAAGGGGACGTGCCCGGTGACGCGGCGGCAGCTGGCGCCGGCGGAGC GGGAGGCGACGCCCAACCACACGCTGCGGCGGCTCATCCAGGCGTGGTGCGCCGCGCACG CCGTCGAGAGGTTCCCCACCCCGCGCCCGCCCGTCGACTCCTGCCGCGTCGCCGCGCTCG TCGACGAGGGGACGACGACGATGCTCGGCGGCGGCGGCAGGCAGCGGCAGCTCGCCGCGC TCCGGGAGATCAAGGCCATCGCCGCCGAGAGCGACCGCAACAAGCGCTGCGTCGAGGCCA CGCCCGGCGCCGTCGAGTTCCTCGTCTCCGTCGTCGTCCAGAGCCATGCCGCCGCCTCCA CCTCAGCCAGCTCGGACGACGACGACCTGTTCGACTCGGTGATCGATTCCCCCATGTCGA CGAGCTCGCCGGAGGAGGAGGCCCTGGGCGTGCTCTACTCCCTCAAGCCGTCCGAGCCCA CCCTGCGCCGCGTCCTCGGCAAGGACAATGGCGTCGGCTTCCTCGACACCCTCGCCTCCG TGCTCCGCCGCCCGAGCTACCGTTCGCGCGCGTATGCCATCCTCCTCCTGAAGGCGGTGA CGTCGGCGATGCCGCCGGAGCGGCTGATGGCGGTGAGCCCCGAGCTGGTGGAGGAGGTGG TCCGGGTGGTGTCCGACGGCGTGTCGTCGAAGGCGGTGAAGGCGGCGCTGCACGTGCTGT GCCGGCTGTGCCCGTGGGGGCGGAACCGCGTGAAGGCGGTGGAGGCCGGCGCGGTGGCGG CGCTGGTGGAGCTCCTCCTCGACGAGGAGGGCGGCGGCGGGCGGCGGCGCGCGGCGGAGC TGGCGGTGGTGGCGATCGACCACCTGTGCGGGTGCGCGGAGGGGAGGTCGGAGCTGGTGG CGCACCCGGCGGGGCTCGCCGTGGTGTCCAAGAGGGCGATGCGGGTGTCGCCGGCGGCCA CCGAGAGCGCCGTGCGCGCGCTCCACGCCGTCGCGAGGAACGCGGCGACGCCGGCCGTGC TGCAGGAGATGCTCGCCGTCGGCGTGGTGGCGAAGCTGCTGCTGGTGCTGCAGGCGGACG GCGGCGAGCGCGCCAGGGCGAGGGCGAGGGAGATGCTCAGGGCGAACGCTAGGGTTTGGA AGGACTCGCCATGCTTGCAAGCTCACCTTAAGGCTTCTTACCCCTCCTGATCATTTCATC ACCATCACATCCATCCACCGATCTATTAATTATTATTAATTGCTAAGAGGAGCACATGCT TTAATTTGCACTCCTCTTAGTAGTTAATTAGATTTTGTGATTACTTTTAGTTCTTTAATT TGTTTATGATCTGAATGTACAAAATACACTGTAAATCTTTCATTAATTCTGTACAAAAAT ACACTATAAATCTTTCATTGCCT