Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0539100-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19973187:19977396:1 gene:Os02g0539100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Digalactosyldiacylglycerol synthase 1. (Os02t0539100-01)
Sequence	ATGGAGGCGAGGGCGTCGCCGTCTCCGTCGCCGCAGCGGCCTGCGTCGATGGGTAGAGGC GGCGGAGGAGGCGGAGGAGGAGGGGACGCGAGCGCGGCGCTGTCGTTCATCTACAAGGGG TGGAGGGAGGTGCGGGACTCGGCGAGCGCGGACCTGCGGCTGATGCGTGCGCGGGCGGAC TCGCTGCGCACGCTCGCCGACCGGGAGCTGGAGCACCTCCTGGTGTCGGCGTCCACCACG GTGGCGGCGCCCGCGCCGCCCGTCGCGGCGGGGGCGCCCATCGCGGAGGTGGAGTTCGTG CGCAACCGGATCCAGCCCAAGATCTCCGAGCTGCGGCGCCAGTACGCGGCGTCCGGGGAC TGGGAGCTCGGCCTCGGCAGGAGGGTGCTCGAGGGCTGGGTGGCGCCTCCGCCGCCCAGG GGCGCCACCACCGCCCGCGTCGACCTCTCCGGGATCACCGCCATACGCAACGCCCTCGTC CCTGAGGTCGCCGGCGGCGGCGGGGCGAGCACCGCCTGGTGGAGCGGGGATGAGATGGAG GAGGAGGAGGAGAAGGAGTGGGAGGTGGTGAGGATGATTCGCGGCGGCCTCAAGGAATTG GAGCGCCGCAGCCAGAGCAGCGGCGAGATCTTGGGGGGAATCCCTGGCCCCAGCGAGCTC GTCGAGAAATTCAAGTCCAGACTGAAATCATTTAACATGGAGCCTCTTGGATCCAAGGAA GTTCCTCCTCTTGATCTGACTGAAATTATGGCAAATCTAGTTAGGCAATCTGGGCCCTTT TTGGATCAACTTGGTCTAAGGAGAGAACTACGTGACAAACTAGTGGAGACATTGTATAGC AGACAAAATCATTCCCTTTCAGCAGATTCATCCTTACTCGGAGATGATAACTCAACGGAT GAGCTTGATTTAAGAATTGCTAGTGTGCTACAAAGTACTGGTTATCATACAGATGATGGT TTATGGAACGAACCTTCAAAATACGAGGTTTCAGACAATAAAAGGCATGTTGCAATAGTC ACCACAGCAAGCCTACCATGGATGACAGGAACAGCAGTTAATCCATTGTTCCGGGCAGCA TATTTGGCAAGAAACTCAAAACAGGATGTCACACTGGTGGTGCCTTGGCTTTGCAAGTCA GATCAAGAACTTGTGTATCCAAATAGCATGACCTTCAGTTCACCAGAAGAGCAGGAAACA TATATAAAGAAGTGGCTGGAGGAAAGGCTTGGGTTTGAATCAAACTTCAAGATATCATTT TATCCTGGCAAGTTCTCCAAAGAGCGCCGTAGCATCATTCCTGCTGGGGATACATCACAG TTCATTTCATCGAGAGAAGCTGATATAGCAATATTGGAAGAACCAGAGCATCTGAACTGG TATCATCATGGGAATCGTTGGACTGACAAGTTCAATCATGTAGTTGGCGTAGTTCATACG AATTACCTAGAATATATCAAGAGAGAGAAGAATGGTGCTCTTCAAGCTTTCCTGGTCAAA CACATCAACAATTGGGTGACCAGAGCATACTGCGATAAGGTTTTACGTCTGTCTGCAGCA ACTCAGGATCTTCCTAAGTCTATTATTTGCAACGTCCATGGTGTAAATCCAAAGTTCCTT AAGATTGGAGATAAAATAATGGCCGATAGGGAGAATGGGCAGCAATCATTTTCCAAGGGA GCATATTTTCTGGGCAAAATGGTATGGGCCAAAGGTTACCGGGAACTGTTAGATTTGTTG GATAAACGTAAAAGCGACTTGCAAGGATTCAAGTTGGATGTATATGGAAGTGGCGAGGAC TCACAAGAAGTCCAATCTACCGCCAAGAAACTGAACCTGAATCTAAACTTTTTTAAGGGA AGGGACCATGCAGATGACTCACTCCATGGGTACAAGGTATTCATCAACCCGAGCATCAGT GATGTCCTGTGCACAGCAACAGCGGAAGCTCTCGCGATGGGGAAGTTCGTCATCTGCGCG GAGCATCCATCGAACGAGTTCTTCATGTCGTTCCCGAACTGCCTGACGTACAGGACCCCG GAGGAGTTCGTCGCCAGGGTGAACGAGGCCATGGCCAGGGAACCCCAGCCTCTCACCCCG GAGCAAAGGTACAACCTGTCGTGGGAGGCAGCAACCGAGAGGTTCATGGAGTACTCAGAC CTCGACAAGGTTCTCAGCCAACCTGTTACAGAAGGCGTGCACAGAAGCAAGACGAGAAGA ACAATTCAGAGTAATCTGTCGGACGCCATGGATGGAGGATTGGCGTTTGCTCACCACTGC CTAACTGGTAGCGAGGTTCTCAGGCTGGCAACGGGAGCGATTCCTGGTACGCGCGACTAC GACAAGCAACACTGCGTGGACATGGGCCTCCTGCCGCCTCAAGTGCAGCACCCTGTATAT GGTTGGTGA

Peptide Sequence

PEP ID	Os02t0539100-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19973187:19977396:1 gene:Os02g0539100 transcript:Os02t0539100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Digalactosyldiacylglycerol synthase 1. (Os02t0539100-01)
Sequence	MEARASPSPSPQRPASMGRGGGGGGGGGDASAALSFIYKGWREVRDSASADLRLMRARAD SLRTLADRELEHLLVSASTTVAAPAPPVAAGAPIAEVEFVRNRIQPKISELRRQYAASGD WELGLGRRVLEGWVAPPPPRGATTARVDLSGITAIRNALVPEVAGGGGASTAWWSGDEME EEEEKEWEVVRMIRGGLKELERRSQSSGEILGGIPGPSELVEKFKSRLKSFNMEPLGSKE VPPLDLTEIMANLVRQSGPFLDQLGLRRELRDKLVETLYSRQNHSLSADSSLLGDDNSTD ELDLRIASVLQSTGYHTDDGLWNEPSKYEVSDNKRHVAIVTTASLPWMTGTAVNPLFRAA YLARNSKQDVTLVVPWLCKSDQELVYPNSMTFSSPEEQETYIKKWLEERLGFESNFKISF YPGKFSKERRSIIPAGDTSQFISSREADIAILEEPEHLNWYHHGNRWTDKFNHVVGVVHT NYLEYIKREKNGALQAFLVKHINNWVTRAYCDKVLRLSAATQDLPKSIICNVHGVNPKFL KIGDKIMADRENGQQSFSKGAYFLGKMVWAKGYRELLDLLDKRKSDLQGFKLDVYGSGED SQEVQSTAKKLNLNLNFFKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICA EHPSNEFFMSFPNCLTYRTPEEFVARVNEAMAREPQPLTPEQRYNLSWEAATERFMEYSD LDKVLSQPVTEGVHRSKTRRTIQSNLSDAMDGGLAFAHHCLTGSEVLRLATGAIPGTRDY DKQHCVDMGLLPPQVQHPVYGW

Transcript Sequence

Transcript ID	Os02t0539100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19973187:19977396:1 gene:Os02g0539100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Digalactosyldiacylglycerol synthase 1. (Os02t0539100-01)
Sequence	GCCATCTCACTCGACTCGCCCAAGAACTCGGAGGTGTTCGACGCGGTCGCCGCCGCAGCA GCAGCGAGCCATGGAGGCGAGGGCGTCGCCGTCTCCGTCGCCGCAGCGGCCTGCGTCGAT GGGTAGAGGCGGCGGAGGAGGCGGAGGAGGAGGGGACGCGAGCGCGGCGCTGTCGTTCAT CTACAAGGGGTGGAGGGAGGTGCGGGACTCGGCGAGCGCGGACCTGCGGCTGATGCGTGC GCGGGCGGACTCGCTGCGCACGCTCGCCGACCGGGAGCTGGAGCACCTCCTGGTGTCGGC GTCCACCACGGTGGCGGCGCCCGCGCCGCCCGTCGCGGCGGGGGCGCCCATCGCGGAGGT GGAGTTCGTGCGCAACCGGATCCAGCCCAAGATCTCCGAGCTGCGGCGCCAGTACGCGGC GTCCGGGGACTGGGAGCTCGGCCTCGGCAGGAGGGTGCTCGAGGGCTGGGTGGCGCCTCC GCCGCCCAGGGGCGCCACCACCGCCCGCGTCGACCTCTCCGGGATCACCGCCATACGCAA CGCCCTCGTCCCTGAGGTCGCCGGCGGCGGCGGGGCGAGCACCGCCTGGTGGAGCGGGGA TGAGATGGAGGAGGAGGAGGAGAAGGAGTGGGAGGTGGTGAGGATGATTCGCGGCGGCCT CAAGGAATTGGAGCGCCGCAGCCAGAGCAGCGGCGAGATCTTGGGGGGAATCCCTGGCCC CAGCGAGCTCGTCGAGAAATTCAAGTCCAGACTGAAATCATTTAACATGGAGCCTCTTGG ATCCAAGGAAGTTCCTCCTCTTGATCTGACTGAAATTATGGCAAATCTAGTTAGGCAATC TGGGCCCTTTTTGGATCAACTTGGTCTAAGGAGAGAACTACGTGACAAACTAGTGGAGAC ATTGTATAGCAGACAAAATCATTCCCTTTCAGCAGATTCATCCTTACTCGGAGATGATAA CTCAACGGATGAGCTTGATTTAAGAATTGCTAGTGTGCTACAAAGTACTGGTTATCATAC AGATGATGGTTTATGGAACGAACCTTCAAAATACGAGGTTTCAGACAATAAAAGGCATGT TGCAATAGTCACCACAGCAAGCCTACCATGGATGACAGGAACAGCAGTTAATCCATTGTT CCGGGCAGCATATTTGGCAAGAAACTCAAAACAGGATGTCACACTGGTGGTGCCTTGGCT TTGCAAGTCAGATCAAGAACTTGTGTATCCAAATAGCATGACCTTCAGTTCACCAGAAGA GCAGGAAACATATATAAAGAAGTGGCTGGAGGAAAGGCTTGGGTTTGAATCAAACTTCAA GATATCATTTTATCCTGGCAAGTTCTCCAAAGAGCGCCGTAGCATCATTCCTGCTGGGGA TACATCACAGTTCATTTCATCGAGAGAAGCTGATATAGCAATATTGGAAGAACCAGAGCA TCTGAACTGGTATCATCATGGGAATCGTTGGACTGACAAGTTCAATCATGTAGTTGGCGT AGTTCATACGAATTACCTAGAATATATCAAGAGAGAGAAGAATGGTGCTCTTCAAGCTTT CCTGGTCAAACACATCAACAATTGGGTGACCAGAGCATACTGCGATAAGGTTTTACGTCT GTCTGCAGCAACTCAGGATCTTCCTAAGTCTATTATTTGCAACGTCCATGGTGTAAATCC AAAGTTCCTTAAGATTGGAGATAAAATAATGGCCGATAGGGAGAATGGGCAGCAATCATT TTCCAAGGGAGCATATTTTCTGGGCAAAATGGTATGGGCCAAAGGTTACCGGGAACTGTT AGATTTGTTGGATAAACGTAAAAGCGACTTGCAAGGATTCAAGTTGGATGTATATGGAAG TGGCGAGGACTCACAAGAAGTCCAATCTACCGCCAAGAAACTGAACCTGAATCTAAACTT TTTTAAGGGAAGGGACCATGCAGATGACTCACTCCATGGGTACAAGGTATTCATCAACCC GAGCATCAGTGATGTCCTGTGCACAGCAACAGCGGAAGCTCTCGCGATGGGGAAGTTCGT CATCTGCGCGGAGCATCCATCGAACGAGTTCTTCATGTCGTTCCCGAACTGCCTGACGTA CAGGACCCCGGAGGAGTTCGTCGCCAGGGTGAACGAGGCCATGGCCAGGGAACCCCAGCC TCTCACCCCGGAGCAAAGGTACAACCTGTCGTGGGAGGCAGCAACCGAGAGGTTCATGGA GTACTCAGACCTCGACAAGGTTCTCAGCCAACCTGTTACAGAAGGCGTGCACAGAAGCAA GACGAGAAGAACAATTCAGAGTAATCTGTCGGACGCCATGGATGGAGGATTGGCGTTTGC TCACCACTGCCTAACTGGTAGCGAGGTTCTCAGGCTGGCAACGGGAGCGATTCCTGGTAC GCGCGACTACGACAAGCAACACTGCGTGGACATGGGCCTCCTGCCGCCTCAAGTGCAGCA CCCTGTATATGGTTGGTGAAGTAAACCAAACCTGCATCTGCATGCACTAAGTTACTGGAT AGTTTGTAGGTACATATGTACTGTACATGACAAGTCATGTAGATCTTTGTAAAGTCTCGT ACTGTAACATGGGTAACTAGTCTAAGCTATTGTTGTCATTGTATTGTACTGCTTGTAGTA ATATTGTTTTTTGTCAGTAAAATTGGAGCTTCAAGTATATATGGTACGTTGGTACTAGGT TCCTTGTCAACATGAAGCTCTCCTTTGTGC