Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0538900-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:19962640:19967923:-1 gene:Os02g0538900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 21 description:Basic-leucine zipper (bZIP) transcription factor domain containing protein. (Os02t0538900-01)
Sequence

ATGTCTCGGTCGCCGCACCTCCCTCCCCGCTGCCCGCCGCTGGGTCCTCAGATCACAAGG
AGGGACGACAGCTTGTTCACGCAGAGCTGCAGGTTTCCGTCGGAGGATCCATTCGTCGGT
GAGCCGCCGTGCTGGCTCGATGATCTCCTCGCGGACTCCGGGAAGAGCCACACCCTTCCT
CCTCTCAGGAGAGCCTGCAGCGATTCTGATGCTATCTTGGATGTGCTGACGTCGTTCCAG
AGCCCAATCTACCCTATCGATGAAGGGGATCCGCAGCCGGTTGGCGAAGCTGGGGAGTCG
TTCAATGCTGCGGCTGAAGGGGGTGGAAGTGGTGCTGGCATCGAAGGTAGCTGTGTTTAT
GGACCAAATTCGCCGAGACAGAAGACTAGGCTGACCAGTTCAGAGAGTTCCATGGTTAAC
GCTGTCTTGGAGAATGTCCCTAGCAACCCATTGCAGTACCTGATGATTGATGCCACAAGT
GGTGTGAACTGTAATGTTGGTGCAGCCAATGGAACTGGAGACACAGGTGATGCTGTATGC
CACGCTGATCAAGAGAAGTCACTTAAAAGGCGCTCAGGCCAAAGATCAAGGGTCAGAAAA
CTTCAATACATTGCTGATCTTGAGAGAACTGTTGACTCACTTCAGAACATAGGGGCTGAT
TTGGCTGTGAGGGTGGCATCTCTTTTCCAGCTTCGTAATGCTCTATCAATGGAAAACAAG
CAACTGAGGAGGCAGATCACTAGTCTTCAGCAGGCAAAACTAATTAAGGATGGCCAAACG
CAGATGCTGAAGAAGGAAACCGAGAGGCTGAAGCAGCTCTCAGTGCGCCACCGCAGGAGC
AGGAGCGTCACCTCTTGCTTTGAGGCCAACTCATTTGGAGGAGGAGACCCATCTGCGATC
AACTGGCAGATGCTCGACATGTCAAAGCTCAGCTTGAACGGCGGCGCTGTTGTTCCTCCT
AGAGGCGGCTACGGCATGTGA

Peptide Sequence

PEP ID

Os02t0538900-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:19962640:19967923:-1 gene:Os02g0538900 transcript:Os02t0538900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 21 description:Basic-leucine zipper (bZIP) transcription factor domain containing protein. (Os02t0538900-01)
Sequence

MSRSPHLPPRCPPLGPQITRRDDSLFTQSCRFPSEDPFVGEPPCWLDDLLADSGKSHTLP
PLRRACSDSDAILDVLTSFQSPIYPIDEGDPQPVGEAGESFNAAAEGGGSGAGIEGSCVY
GPNSPRQKTRLTSSESSMVNAVLENVPSNPLQYLMIDATSGVNCNVGAANGTGDTGDAVC
HADQEKSLKRRSGQRSRVRKLQYIADLERTVDSLQNIGADLAVRVASLFQLRNALSMENK
QLRRQITSLQQAKLIKDGQTQMLKKETERLKQLSVRHRRSRSVTSCFEANSFGGGDPSAI
NWQMLDMSKLSLNGGAVVPPRGGYGM

Transcript Sequence

Transcript ID

Os02t0538900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19962640:19967923:-1 gene:Os02g0538900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 21 description:Basic-leucine zipper (bZIP) transcription factor domain containing protein. (Os02t0538900-01)
Sequence

CTCCTCTCCCTCCTCCTCCTCCTCCGCCACCCTGCGCCGCCGCCCGAATCCCCTCCCACT
CGCCGCCGCCGGCGACAGCAGGCACGGTGCGAGCGGCCGGACGTCCTCCTCTCCTCCTCC
ACGCGCGTTCGCTGCCGGCGAGCAGGGGCAGACGAGCACGCGACGCGGCGCCGGCCTCCT
TCCACCGCCACCTACCTGACGCCGCCGCCTCGGTTCGAACCGAACCGAATCGAATCGAAG
ATGAACGGGATAAAGGAGATGATGTTGGAGGGGCTGTAGTTAAGTAGCACAAGAGAGGTG
AACAGACGTCGGGAGCGTGTTCTCTCGCCATGTCTCGGTCGCCGCACCTCCCTCCCCGCT
GCCCGCCGCTGGGTCCTCAGATCACAAGGAGGGACGACAGCTTGTTCACGCAGAGCTGCA
GGTTTCCGTCGGAGGATCCATTCGTCGGTGAGCCGCCGTGCTGGCTCGATGATCTCCTCG
CGGACTCCGGGAAGAGCCACACCCTTCCTCCTCTCAGGAGAGCCTGCAGCGATTCTGATG
CTATCTTGGATGTGCTGACGTCGTTCCAGAGCCCAATCTACCCTATCGATGAAGGGGATC
CGCAGCCGGTTGGCGAAGCTGGGGAGTCGTTCAATGCTGCGGCTGAAGGGGGTGGAAGTG
GTGCTGGCATCGAAGGTAGCTGTGTTTATGGACCAAATTCGCCGAGACAGAAGACTAGGC
TGACCAGTTCAGAGAGTTCCATGGTTAACGCTGTCTTGGAGAATGTCCCTAGCAACCCAT
TGCAGTACCTGATGATTGATGCCACAAGTGGTGTGAACTGTAATGTTGGTGCAGCCAATG
GAACTGGAGACACAGGTGATGCTGTATGCCACGCTGATCAAGAGAAGTCACTTAAAAGGC
GCTCAGGCCAAAGATCAAGGGTCAGAAAACTTCAATACATTGCTGATCTTGAGAGAACTG
TTGACTCACTTCAGAACATAGGGGCTGATTTGGCTGTGAGGGTGGCATCTCTTTTCCAGC
TTCGTAATGCTCTATCAATGGAAAACAAGCAACTGAGGAGGCAGATCACTAGTCTTCAGC
AGGCAAAACTAATTAAGGATGGCCAAACGCAGATGCTGAAGAAGGAAACCGAGAGGCTGA
AGCAGCTCTCAGTGCGCCACCGCAGGAGCAGGAGCGTCACCTCTTGCTTTGAGGCCAACT
CATTTGGAGGAGGAGACCCATCTGCGATCAACTGGCAGATGCTCGACATGTCAAAGCTCA
GCTTGAACGGCGGCGCTGTTGTTCCTCCTAGAGGCGGCTACGGCATGTGAAAATTTGACA
GCAACAACCAACATTGCCTGCACTGATCTTCACCTGTGACAGAATTGCTTGCAATATCAT
TAGTTTGTGGTTAACAGTTCACTAACCTGACCAACCATAGGTTTATTATTATGGGTCCAT
CTTTTAGGAGAGGGAGATTAAGAGAGGGAGAGAGTTGAGAGAACATCAGTCGTTATCGCG
GAAGATTTGCTGAGGTTATCATGCAAGTTTTATCTTTTTTGTAGAATTCTGCAATGACTT
CCATCGAACACATATGAGATGAAGCAATCTTTGCATTGCTTAAATT