Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0538000-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19924420:19928340:-1 gene:Os02g0538000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Lethal albinic seedling description:Threonyl-tRNA synthetase, Chloroplast biogenesis and chloroplast ribosomal system construction (Os02t0538000-01)
Sequence	ATGGCGGCCGCCGTCTCCGCGCCCCTTCTCCGGTTCCACCACCACCACCGCTGCCTCCTC CGCCACTCCTCCTCGCCGCGCCGCTACCCAGCCGGCTTCTCGCGTGGGCTCAGCTCCGTC TCGTTCGGCCTCCCGCGCAGCACCACCACCGCCGCGCGCTCCACCGCCTCGCCCTCGGCG CCGTCGGCGGCGGCGGCCGAGGCCACGGATGCGGCTTCCGCCCAGGCGGGATCCGACGGC AAGGGGGATGGGATTGGGGAGGAGGAGCGCGTCGTGCTCCCCACCAACGAGTCCTCCGAC CGCCTGCTCCGCATCCGCCACACCTGTGCGCATGTGATGGCCATGGCCGTCCAGAAGCTG TTCCCCAACTCCAAGGTGACAATAGGTCCCTGGATAGACAACGGCTTCTACTACGACTTC GACATGGAGCCCCTCACGGACAAGGACCTCAAGAGGATCAAGAAAGAGATGGATCGGATC ATCCGGAAGAATCTCCCATTGGTGAGGGAGGAGGTGTCCAGGGAAGAGGCCCAAAAGAGG ATTGAAGCGCTTAATGAGCCATATAAGTTGGAAATTTTGGAGGGCATCAAGGAAGATCCT ATCACAATCTATCACATTGGAGAAGAGTGGTGGGATCTCTGTGCCGGACCTCATGTCGAG TCTACTGGCAAAATCGATAGAAGAGCTGTTGAGCTTGAGTCTGTTGCTGGTGCTTACTGG AGAGGTGACGAAAGTAATCAAATGCTACAAAGAATATACGGGACTGCATGGGAGACTGAA GACCAATTGAAGGCTTACATCCACTTCAAGGAAGAGGCCAAGCGCCGTGATCATCGGCGA TTAGGTCTGGATCTTGATCTATTCTCCATACAGGAAGATGCTGGTGGCGGTTTAGTATTC TGGCATCCAAAAGGTGCTATTATCAGACATGTTTTAGAAGACTCATGGAAACAGATTCAC TTGCAACGTGGTTATGATCTATTATACACTCCCCACGTTGCAAAGGCTGAACTTTGGAAG GTTAGTGGGCATATCGATTTCTACAAAGAGAACATGTACAATCAAATGGATGTTGAAGAT GAGCTATATCAACTTCGGCCCATGAATTGCCCTTACCACATTTTAGTATACAAGAGAAAG CTACATTCATACAGGGATTTTCCCATTCGAGTGGCAGAGCTTGGAACTGTCTACAGATAT GAGCTATCTGGTAGTTTGCATGGGCTGTTCCGTGTCAGAGGATTTACGCAGGATGATGCC CACATATTTTGTCTGGAGGACCAGATAAAAGATGAAATTAGAGGTGTTCTTGATCTGACT GAGCAAATACTGGGCCAATTTGGCTTTCGGTATTATGAGATAAACCTTTCAACAAGGCCA GAAAAATCTGTTGGCAGTGATGACATATGGGAAAAAGCAACACTTGCACTAAAAGATGCA CTAGAAGACAAAGGTTGGGAGTACAAGGTTGATGAAGGTGGAGGCGCTTTCTATGGCCCA AAAATTGATTTGAAAATTGAGGATGCTCTTGGAAGAAAATGGCAATGTTCCACTGTGCAG GTCGATTTCAATTTACCTGAGCGGTTTGACATTACTTATGTCAATTCAAATAGCGAGAAG AAACGGCCTATCATGATTCATAGAGCTATCCTTGGGTCTTTGGAACGATTTTTTGGTGTC CTCATTGAACACTATGCTGGTGATTTTCCACTTTGGCTTGCACCAATCCAAGCTCGTATT CTACCTGTGACAGACAATGAGCTGCAATACTGTAACGAGGTGGCTTCAGAACTGAAATCA AAAGGCATTCGAGCTGAGGTATGTCATGGCGAGCGTCTACCAAAGCTAATACGGAATGCC GAAACGAAGAAAGTGCCGCTCATGGCGGTCGTTGGGCCTAAAGAAGTTCAAGCCAGGACC CTCACTATCAGGTCCAGGCATAGTGGGGAGATTGGTACTATGCCTGTGGATGAATTCTTT CGCAGAATCCAACTTGCTATTGCGAACAAATCTTCTTCACTATGA

Peptide Sequence

PEP ID	Os02t0538000-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19924420:19928340:-1 gene:Os02g0538000 transcript:Os02t0538000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Lethal albinic seedling description:Threonyl-tRNA synthetase, Chloroplast biogenesis and chloroplast ribosomal system construction (Os02t0538000-01)
Sequence	MAAAVSAPLLRFHHHHRCLLRHSSSPRRYPAGFSRGLSSVSFGLPRSTTTAARSTASPSA PSAAAAEATDAASAQAGSDGKGDGIGEEERVVLPTNESSDRLLRIRHTCAHVMAMAVQKL FPNSKVTIGPWIDNGFYYDFDMEPLTDKDLKRIKKEMDRIIRKNLPLVREEVSREEAQKR IEALNEPYKLEILEGIKEDPITIYHIGEEWWDLCAGPHVESTGKIDRRAVELESVAGAYW RGDESNQMLQRIYGTAWETEDQLKAYIHFKEEAKRRDHRRLGLDLDLFSIQEDAGGGLVF WHPKGAIIRHVLEDSWKQIHLQRGYDLLYTPHVAKAELWKVSGHIDFYKENMYNQMDVED ELYQLRPMNCPYHILVYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDA HIFCLEDQIKDEIRGVLDLTEQILGQFGFRYYEINLSTRPEKSVGSDDIWEKATLALKDA LEDKGWEYKVDEGGGAFYGPKIDLKIEDALGRKWQCSTVQVDFNLPERFDITYVNSNSEK KRPIMIHRAILGSLERFFGVLIEHYAGDFPLWLAPIQARILPVTDNELQYCNEVASELKS KGIRAEVCHGERLPKLIRNAETKKVPLMAVVGPKEVQARTLTIRSRHSGEIGTMPVDEFF RRIQLAIANKSSSL

Transcript Sequence

Transcript ID	Os02t0538000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19924420:19928340:-1 gene:Os02g0538000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Lethal albinic seedling description:Threonyl-tRNA synthetase, Chloroplast biogenesis and chloroplast ribosomal system construction (Os02t0538000-01)
Sequence	GCAGAGAGACCAAAAACGATATCCAACAGCAGCGGCCACCACGCGCCCACCGCTCCCGGC GCGCGCCACAATGGCGGCCGCCGTCTCCGCGCCCCTTCTCCGGTTCCACCACCACCACCG CTGCCTCCTCCGCCACTCCTCCTCGCCGCGCCGCTACCCAGCCGGCTTCTCGCGTGGGCT CAGCTCCGTCTCGTTCGGCCTCCCGCGCAGCACCACCACCGCCGCGCGCTCCACCGCCTC GCCCTCGGCGCCGTCGGCGGCGGCGGCCGAGGCCACGGATGCGGCTTCCGCCCAGGCGGG ATCCGACGGCAAGGGGGATGGGATTGGGGAGGAGGAGCGCGTCGTGCTCCCCACCAACGA GTCCTCCGACCGCCTGCTCCGCATCCGCCACACCTGTGCGCATGTGATGGCCATGGCCGT CCAGAAGCTGTTCCCCAACTCCAAGGTGACAATAGGTCCCTGGATAGACAACGGCTTCTA CTACGACTTCGACATGGAGCCCCTCACGGACAAGGACCTCAAGAGGATCAAGAAAGAGAT GGATCGGATCATCCGGAAGAATCTCCCATTGGTGAGGGAGGAGGTGTCCAGGGAAGAGGC CCAAAAGAGGATTGAAGCGCTTAATGAGCCATATAAGTTGGAAATTTTGGAGGGCATCAA GGAAGATCCTATCACAATCTATCACATTGGAGAAGAGTGGTGGGATCTCTGTGCCGGACC TCATGTCGAGTCTACTGGCAAAATCGATAGAAGAGCTGTTGAGCTTGAGTCTGTTGCTGG TGCTTACTGGAGAGGTGACGAAAGTAATCAAATGCTACAAAGAATATACGGGACTGCATG GGAGACTGAAGACCAATTGAAGGCTTACATCCACTTCAAGGAAGAGGCCAAGCGCCGTGA TCATCGGCGATTAGGTCTGGATCTTGATCTATTCTCCATACAGGAAGATGCTGGTGGCGG TTTAGTATTCTGGCATCCAAAAGGTGCTATTATCAGACATGTTTTAGAAGACTCATGGAA ACAGATTCACTTGCAACGTGGTTATGATCTATTATACACTCCCCACGTTGCAAAGGCTGA ACTTTGGAAGGTTAGTGGGCATATCGATTTCTACAAAGAGAACATGTACAATCAAATGGA TGTTGAAGATGAGCTATATCAACTTCGGCCCATGAATTGCCCTTACCACATTTTAGTATA CAAGAGAAAGCTACATTCATACAGGGATTTTCCCATTCGAGTGGCAGAGCTTGGAACTGT CTACAGATATGAGCTATCTGGTAGTTTGCATGGGCTGTTCCGTGTCAGAGGATTTACGCA GGATGATGCCCACATATTTTGTCTGGAGGACCAGATAAAAGATGAAATTAGAGGTGTTCT TGATCTGACTGAGCAAATACTGGGCCAATTTGGCTTTCGGTATTATGAGATAAACCTTTC AACAAGGCCAGAAAAATCTGTTGGCAGTGATGACATATGGGAAAAAGCAACACTTGCACT AAAAGATGCACTAGAAGACAAAGGTTGGGAGTACAAGGTTGATGAAGGTGGAGGCGCTTT CTATGGCCCAAAAATTGATTTGAAAATTGAGGATGCTCTTGGAAGAAAATGGCAATGTTC CACTGTGCAGGTCGATTTCAATTTACCTGAGCGGTTTGACATTACTTATGTCAATTCAAA TAGCGAGAAGAAACGGCCTATCATGATTCATAGAGCTATCCTTGGGTCTTTGGAACGATT TTTTGGTGTCCTCATTGAACACTATGCTGGTGATTTTCCACTTTGGCTTGCACCAATCCA AGCTCGTATTCTACCTGTGACAGACAATGAGCTGCAATACTGTAACGAGGTGGCTTCAGA ACTGAAATCAAAAGGCATTCGAGCTGAGGTATGTCATGGCGAGCGTCTACCAAAGCTAAT ACGGAATGCCGAAACGAAGAAAGTGCCGCTCATGGCGGTCGTTGGGCCTAAAGAAGTTCA AGCCAGGACCCTCACTATCAGGTCCAGGCATAGTGGGGAGATTGGTACTATGCCTGTGGA TGAATTCTTTCGCAGAATCCAACTTGCTATTGCGAACAAATCTTCTTCACTATGAACATT TAAATATGCTAAAGAGCAGTTGATATTGTAGAGTATTAGATCTTGTGCACATACACGATA TAGCAGCTGTGCTCTAGAAGAAGTTAGCAACTGAGGTCTGGAAGAGCAGATCAAATAATT TTGTGCATAATCGCCATCGCCGTGTTTTGCAATATAACAAATGTCCAGT