Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0537200-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19842195:19845119:-1 gene:Os02g0537200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 94 description:Cyclin-like F-box domain containing protein. (Os02t0537200-01)
Sequence	ATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAG GCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAG ATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTA TCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTAT CTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTG GCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATAC CATGATGTATTTGATAGGTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACA ATCAAGTTTTACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGAT TTGGAATATCTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTC AAGCGGCTAACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAAT CTGATCTCCTCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACT TGTCTCAGTATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGAT TTTCATCTGCATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCC CAACAATCTGTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGC CTAACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTT GAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGAT ATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGAT GGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAA TTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAA ACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCT TTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTA TCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGT ATTGAGAAGTGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAAT GCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGT AAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTG ACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTA CTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGAT GAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGC AAAGCCAAGATCACTGTCATCTGA

Peptide Sequence

PEP ID	Os02t0537200-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19842195:19845119:-1 gene:Os02g0537200 transcript:Os02t0537200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 94 description:Cyclin-like F-box domain containing protein. (Os02t0537200-01)
Sequence	MFDNCEVTIIVSGAMHRAKKAKVEPSSALRSDKFSSLPQEIKVTILSKLNSLDAIRASIL SSAWRNVWTTLPEIYLCDLYLSWGSSETTQRSNFITLVDLALLLHNGPLASFSILGFKRY HDVFDRWMYMLSRKKPRSITIKFYSGHNYKIPSNLFSLSDLEYLQIKRCIIGLPQEFEGF KRLTVLNLKYFSSTDSDINNLISSCPLLSTLCLKYFEGITCLSIQAPALQDLEVKGNFQD FHLHAPNLSNLDVSLDKTEAQQSVVVEGNRKNYLKQAMVSLTSIVRLVMKRCIIALPQEF EGFKQLFVLNLKYFSSTDHDINTLVSSCPWLNTLRLKHFDGISCLRIEGQVLQIVEVEGK FEDFHLNAPNLSHVYITLDKTEAQQSVAVVGDMKNYMKQAFVSLTSIEELTISGSFLTYL SKGCLSMQLPGVFDHLKKICIEKCFWNWTEVLGACSIFQNAPTFRELEIWSFPRPEAYRR KTIWDQDQTEIEEPTLHHLVTVAINDFVGLNCEVALVGLLLSWSPALEDLKIFRAKNVND EYMCICKGLTKLLALPRASSKAKITVI

Transcript Sequence

Transcript ID	Os02t0537200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19842195:19845119:-1 gene:Os02g0537200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 94 description:Cyclin-like F-box domain containing protein. (Os02t0537200-01)
Sequence	CCCGAACTGTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAG GACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTG GCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGAC AATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTG GAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTC ACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCT TGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGG GGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTG CTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTA TTTGATAGGTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTT TACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATAT CTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTA ACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCC TCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGT ATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTG CATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCT GTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGC ATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTC AAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACT CTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGT TGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGAC TTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCC CAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGC CTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGG TGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAG TGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACT TTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATA TGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCC ATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGG TCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATG TGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAG ATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCG ACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATG CGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACAT GCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAA CAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCA AGATGAAAAATATAATACTAGTGGTTGATC