Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0537000-01
CDS Infomation

cds chromosome:IRGSP-1.0:2:19834281:19835082:1 gene:Os02g0537000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PMEI8 description:Pectinesterase inhibitor domain containing protein. (Os02t0537000-01)
Sequence

ATGGCGCAGCGCGCGTCTCGCCGTCCCGCCGCGGCGGCGGCAGCAGTCGTCGTGGCCGTC
GTGCTCGCCGTGAGCGGAGGCGTCGGCGCGACGCCGGAGACGGCGTGCAGGGCGGCGGCG
GAGGAGGACAGGCGCGTGGACTACGAGTTCTGCGTGTCGCGGCTGAGCCACCACCACGAC
AGCCCCGACGCGGACACGTGGGGGCTGGCCAAGGTGGCGGCCGACGTCGGCGTCTGCATC
GCCGGCGACGCGGCGTACGACGCCAAGGCGAAGCTGCAGGCCGCCAAGGCGGGCGGCGAG
CGGGAGGCGCTGGAGCGGTGCGCGGAGCTGTACGACCGGATGGGGTCGGCGTTCGCGGCG
GCTTACGACGACATCAACCGGCGCGAGTACGCGGCGGGGAAGGAGAAGGCCGGGGAGGCG
GCGTCGCTCGCGCGGCGGTGCGACGGCGCCTTCGCCGACGCCGGCGTCGCCCCGTCGCCG
CTCGAGCGGCAGACCGCGGAGTCCGTCAAGATCGCCATCGTCTGCACGGCCATCACCAAC
CTCGTCAAGTAG

Peptide Sequence

PEP ID

Os02t0537000-01
PEP Infomation

pep chromosome:IRGSP-1.0:2:19834281:19835082:1 gene:Os02g0537000 transcript:Os02t0537000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PMEI8 description:Pectinesterase inhibitor domain containing protein. (Os02t0537000-01)
Sequence

MAQRASRRPAAAAAAVVVAVVLAVSGGVGATPETACRAAAEEDRRVDYEFCVSRLSHHHD
SPDADTWGLAKVAADVGVCIAGDAAYDAKAKLQAAKAGGEREALERCAELYDRMGSAFAA
AYDDINRREYAAGKEKAGEAASLARRCDGAFADAGVAPSPLERQTAESVKIAIVCTAITN
LVK

Transcript Sequence

Transcript ID

Os02t0537000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19834281:19835082:1 gene:Os02g0537000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PMEI8 description:Pectinesterase inhibitor domain containing protein. (Os02t0537000-01)
Sequence

AAAAAAATCCACATCACTCCCTCACACTCTCACTCGTAGCGAAGCAGGAAGCTAGAGGCT
AGAGCTAAGGCAGACAAGACAGATGGCGCAGCGCGCGTCTCGCCGTCCCGCCGCGGCGGC
GGCAGCAGTCGTCGTGGCCGTCGTGCTCGCCGTGAGCGGAGGCGTCGGCGCGACGCCGGA
GACGGCGTGCAGGGCGGCGGCGGAGGAGGACAGGCGCGTGGACTACGAGTTCTGCGTGTC
GCGGCTGAGCCACCACCACGACAGCCCCGACGCGGACACGTGGGGGCTGGCCAAGGTGGC
GGCCGACGTCGGCGTCTGCATCGCCGGCGACGCGGCGTACGACGCCAAGGCGAAGCTGCA
GGCCGCCAAGGCGGGCGGCGAGCGGGAGGCGCTGGAGCGGTGCGCGGAGCTGTACGACCG
GATGGGGTCGGCGTTCGCGGCGGCTTACGACGACATCAACCGGCGCGAGTACGCGGCGGG
GAAGGAGAAGGCCGGGGAGGCGGCGTCGCTCGCGCGGCGGTGCGACGGCGCCTTCGCCGA
CGCCGGCGTCGCCCCGTCGCCGCTCGAGCGGCAGACCGCGGAGTCCGTCAAGATCGCCAT
CGTCTGCACGGCCATCACCAACCTCGTCAAGTAGACGAAACAAGTGTTGTTTCCTTCGCT
TAATGCAGGTTAATCTTAGAGGAATAAACGAGCGCCATTGTTGATTTCTCGTCTGCTCGA
TCGTTCGATTGCTACGCATGTACTAGTAGTAGCTAGGTTAATCTAGAGGAATAAACGAGC
GACATTGTTGATTTCTTTGCTT