Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0536400-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:19794091:19796121:1 gene:Os02g0536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0536400-01);Hypothetical conserved gene. (Os02t0536400-02)
Sequence

AAGCGGACAGAAGAATTTCGTGTTGATAAGGTGGTAGAAACACATCGTATGGTACAAGAT
GGCAGGAAACAATTTTCTGATAGGACTAGCCACGCTCACAGATTGAGTAATGTTTCTAGA
GAGGACAAAAGGCATACCCGTTGCAGTGAAAGTATACCACAGACCCCCAAGGAGTCACGC
AAGAGAAGCAGATCTAAAAGATCCCGTGGGTCATCCCTCTCTTCTGACAGGAGTACCTCA
CATTCAACATCTAAATGTTCTCGTTCAAGAGCACATTCCCCATCTCATTCTGCACATTCT
AGTTCAAAATCATTTCAGCCAACTCAGCCTGAAGGTTTAAGATCAATGGCAGTATCAAAT
GTCAGTCCATTGCTGGTGTCTGGTTCACCACAACACAACTTACCATCCACAGCGGAAAAC
AAGAACTCAGATTTTCTGGTGAATTCTCCTTTGGAGGGCAATTTAGATTCCAAAACAACA
ACTGGACTCAAGCATACACGTGGTTACCAGCAAGATATCAAAGATTCAAGATTGAGTGGA
GAGTCTCCAGTTATTCCACTCAGGTTGAAAATCCAAAGGAATGGTGAATTGCCTGTATCT
GGTAAAGATGCTTATCTGGATGGTTACACAGAGACCAACTTGAATAATAACTTGGTTTAT
GATGACAATGTTGCTGATGGTGTGCAAGTTCAGAAGACCAATTCTGAGGACGCTTCATCA
GTGAAGTCAAGCAAGGATATTCTGGTGAAAAGTGAGAGGAGCAACTCTTTGAAGCTAACA
ACAAATGAAGTGGTCTCTGCTCTTAAGCACAATGGAATGGAAGCACGTGGTACAGATTTA
TTGAACCAACCTGTAGAGAAGTACTTTGGTGCTGCACGCCTATGGCCATGGGAAGTCATT
TATTATCGGAAGCTTAAAAAGGGTCCAATTTCTACAGAGAACTACGCTAAGCGACTTGAG
CAGAACAAAGAATATAGTATTGTAGATCGGTATGTCAGAAGCAGCAGTGGTTGGTGGGAG
TGCCACTAG

Peptide Sequence

PEP ID

Os02t0536400-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:19794091:19796121:1 gene:Os02g0536400 transcript:Os02t0536400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0536400-01);Hypothetical conserved gene. (Os02t0536400-02)
Sequence

KRTEEFRVDKVVETHRMVQDGRKQFSDRTSHAHRLSNVSREDKRHTRCSESIPQTPKESR
KRSRSKRSRGSSLSSDRSTSHSTSKCSRSRAHSPSHSAHSSSKSFQPTQPEGLRSMAVSN
VSPLLVSGSPQHNLPSTAENKNSDFLVNSPLEGNLDSKTTTGLKHTRGYQQDIKDSRLSG
ESPVIPLRLKIQRNGELPVSGKDAYLDGYTETNLNNNLVYDDNVADGVQVQKTNSEDASS
VKSSKDILVKSERSNSLKLTTNEVVSALKHNGMEARGTDLLNQPVEKYFGAARLWPWEVI
YYRKLKKGPISTENYAKRLEQNKEYSIVDRYVRSSSGWWECH

Transcript Sequence

Transcript ID

Os02t0536400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19794091:19796121:1 gene:Os02g0536400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os02t0536400-01);Hypothetical conserved gene. (Os02t0536400-02)
Sequence

GAAGCGGACAGAAGAATTTCGTGTTGATAAGGTGGTAGAAACACATCGTATGGTACAAGA
TGGCAGGAAACAATTTTCTGATAGGACTAGCCACGCTCACAGATTGAGTAATGTTTCTAG
AGAGGACAAAAGGCATACCCGTTGCAGTGAAAGTATACCACAGACCCCCAAGGAGTCACG
CAAGAGAAGCAGATCTAAAAGATCCCGTGGGTCATCCCTCTCTTCTGACAGGAGTACCTC
ACATTCAACATCTAAATGTTCTCGTTCAAGAGCACATTCCCCATCTCATTCTGCACATTC
TAGTTCAAAATCATTTCAGCCAACTCAGCCTGAAGGTTTAAGATCAATGGCAGTATCAAA
TGTCAGTCCATTGCTGGTGTCTGGTTCACCACAACACAACTTACCATCCACAGCGGAAAA
CAAGAACTCAGATTTTCTGGTGAATTCTCCTTTGGAGGGCAATTTAGATTCCAAAACAAC
AACTGGACTCAAGCATACACGTGGTTACCAGCAAGATATCAAAGATTCAAGATTGAGTGG
AGAGTCTCCAGTTATTCCACTCAGGTTGAAAATCCAAAGGAATGGTGAATTGCCTGTATC
TGGTAAAGATGCTTATCTGGATGGTTACACAGAGACCAACTTGAATAATAACTTGGTTTA
TGATGACAATGTTGCTGATGGTGTGCAAGTTCAGAAGACCAATTCTGAGGACGCTTCATC
AGTGAAGTCAAGCAAGGATATTCTGGTGAAAAGTGAGAGGAGCAACTCTTTGAAGCTAAC
AACAAATGAAGTGGTCTCTGCTCTTAAGCACAATGGAATGGAAGCACGTGGTACAGATTT
ATTGAACCAACCTGTAGAGAAGTACTTTGGTGCTGCACGCCTATGGCCATGGGAAGTCAT
TTATTATCGGAAGCTTAAAAAGGGTCCAATTTCTACAGAGAACTACGCTAAGCGACTTGA
GCAGAACAAAGAATATAGTATTGTAGATCGGTATGTCAGAAGCAGCAGTGGTTGGTGGGA
GTGCCACTAGAATGCCAGACTGGTGGTATAGATAGATGCAGTTGAGGCTTTGCGTGTATG
CTGCTGCAGGTACATTTTGAGGATGACAAGGTTTGCCTTCTAATCAGTCCATTCCTAGAG
CTCCATGAGTGTAAGCAGACCCTTAACTATGAGAATTATTAAGTATTAGGTTCTTTCATT
AGTATAATTTTGTTGAGTAAGGGTTTGCACAATTGCACCTAAGTAGCTTATTCTGCCACC
AATATTATGCTGTTGCATGGTCAGTATGTTTTAAGTTGTAATGTTTCAACGACTCGCCCC
AGTGAGGTACTTTGGATGGCCAACAGGTAAGCAAAGATGCTTATTTTATACATGATTTTT
TGGGGAAAAGAAACAAGCCTCTTGTTTAGCAGTTATATAGAGGAAAGGTTCTCTCTGTAG
TTTATGATTTCCTTAGTACTCCCTCCCTCTGGTTTCATAATTCTTGACATTTTGGACAAT
GATATGGTCTCCAAAATATATCTTTAACTATGTTTTCTCTATTATAATATATACAATAAA
TAAGTATATTTTTACTTTTATTATAGTACTTATAAGACAAATCTATATATGTTGTTTTAG
TGTCTTTAAACTTAATATTTTAGAAGTTATTGATAGTCAAAGTTATAAAAGTTTGATCTT
AACCTTATCCTAAACACCAAGACTTATGAAACCGGAGGGAGTATGACTACAATTATTTTT
GTAATCAACAACTTCCATACCCCGCTAATCGAGCTGAAATATTACAGTGATGCCACTTCG
TGATAGATTTCATATGCAAGATGTGCTCCCCCGGCTTACAAGCTTTTGGATAGGACCAAG
AAATTCTTCGCATGTTTGAGTCGTCACTGTTATTTTTGTGTAGCTGAATTGGAGTAGGTG
ATTGAAGCTTTGCTAACTGGATTACCTGTTACTTTTATGTAGCTACCCTATGAGGATTAT
GCCATTCTGGCTGGACACATGAACTCCATAATATCAGTACCTTTATTTGAG