Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0536300-00
CDS Infomation

cds chromosome:IRGSP-1.0:2:19789458:19791017:1 gene:Os02g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 93 description:Leucine-rich repeat 2 domain containing protein. (Os02t0536300-00)
Sequence

ATGCACATGCTGTCAAGGAAAAAACCAAGTTCCATCACAATCGAGTTTTCCTGTGGGAAT
TATTATAAGATTCCATCGTGCCTCTTCTCTATCAGTGATTTGGAATATCTACGGATAGAA
AGATGCATCATCAGCTTGCCTCGGCAGTTTGAAGGTTTTAAGCAGCTAACTGTTCTGAAT
CTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCTCGG
CTGAATACATTGCGTTTGAAATATTTTAAGGGTATCAATCGTCTCCGAATTCAAGCTCAG
GCAGTACAGGTTTTAGAGGTTAAAGGGTCCTTTGAAGACTTTCATCTGCATGCACCTAAC
CTGTCCAATGTGTATGTTACACTCAACAAAACAAAAGTTGCAGACAGGAGTAAAAACTAT
ATGATGCAAGCTTTTGTGAGCCTAACTGGAATAGAAGCACTTGTTATGAAAAGATGTATG
GTTGCGTTGCCTCAGACGTTTGAAGGTTTCAAGCGGCTATCTGTCTTGAATCTGAAATAT
ATATACTCAACAGACGCTGACATAGCAAATCTGATCTCCTCATGCCCATGGCTGAAAACA
CTGCATTTGAAATATTTTGAGGGTATCAGTTGTCTCCGTATTCAAGCTCCGGCACTGCAG
CATTTAGAGGTTCAAGGGAATTTCGAAGACTTGCATCTGCATGCACCTAATCTGTTGTAT
CTTACACTCGACAAAACAGAAACAGAACAATGTGATGCTGTTGCGGGTGACAAGAAAAAT
TATCCCAAGGAAGCTTTTGTCAGCCTAACTAGTATAGAACTTTCTATAAATGGCCCTTCC
TTGACGTATCTATCGGAAGGGTGCTTGTTGACCAAACCCCCAGGCGTGCTTGATCGTCTG
AGGAAGGTTAGTATTGGGGAGTGCTTTTGGCACTGGACAGGTCTTGGGTGCTTGTTCAAT
TTTTCGGAATGCCCCTATGTTGAGAGAACTCGAGATACAGAGCTTCTCTCGACCGGACGA
TTCTTGGAGTCAGCCAATATGGGATCATGA

Peptide Sequence

PEP ID

Os02t0536300-00
PEP Infomation

pep chromosome:IRGSP-1.0:2:19789458:19791017:1 gene:Os02g0536300 transcript:Os02t0536300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 93 description:Leucine-rich repeat 2 domain containing protein. (Os02t0536300-00)
Sequence

MHMLSRKKPSSITIEFSCGNYYKIPSCLFSISDLEYLRIERCIISLPRQFEGFKQLTVLN
LKYFSSTDSDINNLISSCPRLNTLRLKYFKGINRLRIQAQAVQVLEVKGSFEDFHLHAPN
LSNVYVTLNKTKVADRSKNYMMQAFVSLTGIEALVMKRCMVALPQTFEGFKRLSVLNLKY
IYSTDADIANLISSCPWLKTLHLKYFEGISCLRIQAPALQHLEVQGNFEDLHLHAPNLLY
LTLDKTETEQCDAVAGDKKNYPKEAFVSLTSIELSINGPSLTYLSEGCLLTKPPGVLDRL
RKVSIGECFWHWTGLGCLFNFSECPYVERTRDTELLSTGRFLESANMGS

Transcript Sequence

Transcript ID

Os02t0536300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19789458:19791017:1 gene:Os02g0536300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 93 description:Leucine-rich repeat 2 domain containing protein. (Os02t0536300-00)
Sequence

ATGCACATGCTGTCAAGGAAAAAACCAAGTTCCATCACAATCGAGTTTTCCTGTGGGAAT
TATTATAAGATTCCATCGTGCCTCTTCTCTATCAGTGATTTGGAATATCTACGGATAGAA
AGATGCATCATCAGCTTGCCTCGGCAGTTTGAAGGTTTTAAGCAGCTAACTGTTCTGAAT
CTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCTCGG
CTGAATACATTGCGTTTGAAATATTTTAAGGGTATCAATCGTCTCCGAATTCAAGCTCAG
GCAGTACAGGTTTTAGAGGTTAAAGGGTCCTTTGAAGACTTTCATCTGCATGCACCTAAC
CTGTCCAATGTGTATGTTACACTCAACAAAACAAAAGTTGCAGACAGGAGTAAAAACTAT
ATGATGCAAGCTTTTGTGAGCCTAACTGGAATAGAAGCACTTGTTATGAAAAGATGTATG
GTTGCGTTGCCTCAGACGTTTGAAGGTTTCAAGCGGCTATCTGTCTTGAATCTGAAATAT
ATATACTCAACAGACGCTGACATAGCAAATCTGATCTCCTCATGCCCATGGCTGAAAACA
CTGCATTTGAAATATTTTGAGGGTATCAGTTGTCTCCGTATTCAAGCTCCGGCACTGCAG
CATTTAGAGGTTCAAGGGAATTTCGAAGACTTGCATCTGCATGCACCTAATCTGTTGTAT
CTTACACTCGACAAAACAGAAACAGAACAATGTGATGCTGTTGCGGGTGACAAGAAAAAT
TATCCCAAGGAAGCTTTTGTCAGCCTAACTAGTATAGAACTTTCTATAAATGGCCCTTCC
TTGACGTATCTATCGGAAGGGTGCTTGTTGACCAAACCCCCAGGCGTGCTTGATCGTCTG
AGGAAGGTTAGTATTGGGGAGTGCTTTTGGCACTGGACAGGTCTTGGGTGCTTGTTCAAT
TTTTCGGAATGCCCCTATGTTGAGAGAACTCGAGATACAGAGCTTCTCTCGACCGGACGA
TTCTTGGAGTCAGCCAATATGGGATCATGATCAGACGGAGATCAAAGAGCCTACCTTGCA
TCACCTCCTGACGGCGACGATCACCGGTTTCGTGGGGCTGGAATACGAGGTTGATCTCGT
TAGGCTGCTCCTGAGATGGTCACCTGCATTGGAGGAACTGAAGGTGGTCAGGGACGACGA
GGATGTCCTGAACGATGCGTGCATGTGCGAGTCTCTTACCAAGTTACTGGCTCTCCCGAG
GGCTTCTACCAAAGCCAAGATCATTGCCATCTGATCTGATCCTTTATACAGCTATATACC
TCATGTTATTGGC