Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os02t0535400-01
CDS Infomation	cds chromosome:IRGSP-1.0:2:19727120:19729886:-1 gene:Os02g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAR1, Os RAR1 description:Cys- and His-rich domain (CHORD, zinc binding finger motif) containing protein, Innate-immune response (Os02t0535400-01)
Sequence	ATGTTTCATGATGGCATGAAACAGTGGAGTTGCTGTAAGCAAAAAAGCCATGATTTTAGC CTATTTTTGGCTATTCCTGGGTGCAAAACTGGAAAGCACACAACTGAGAAACCAATCACA AAAGCAGTTCCTACTAAACCATCAAAGGCAGTTCCAGTCCAGACTTCGAAGCAGAGTGTG GGAGCTGACACTTGCTCAAGGTGCCGTCAAGGTTTCTTTTGCTCTGACCATGGATCACAA CCCAAGGCACAAATACCAACCGCTACCAGTGATACTAACATGGTACCTGTTGAGAAGCCT GCAGTTCCACCACCAAAGAAAAAAATTGATCTGAATGAGCCTAGGGTTTGTAAGAACAAA GGATGTGGTAAAACCTACAAGGAGAAGGATAATCATGATGAAGCATGCGATTACCATCCA GGACCTGCAGTTTTTCGCGACAGGATTAGAGGGTGGAAATGTTGTGATATTCATGTCAAG GAATTTGATGAATTTATGGAGATCCCTCCGTGCACAAAGGGTTGGCACAATGCTGATGCC GCATGA

Peptide Sequence

PEP ID	Os02t0535400-01
PEP Infomation	pep chromosome:IRGSP-1.0:2:19727120:19729886:-1 gene:Os02g0535400 transcript:Os02t0535400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAR1, Os RAR1 description:Cys- and His-rich domain (CHORD, zinc binding finger motif) containing protein, Innate-immune response (Os02t0535400-01)
Sequence	MFHDGMKQWSCCKQKSHDFSLFLAIPGCKTGKHTTEKPITKAVPTKPSKAVPVQTSKQSV GADTCSRCRQGFFCSDHGSQPKAQIPTATSDTNMVPVEKPAVPPPKKKIDLNEPRVCKNK GCGKTYKEKDNHDEACDYHPGPAVFRDRIRGWKCCDIHVKEFDEFMEIPPCTKGWHNADA A

Transcript Sequence

Transcript ID	Os02t0535400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:2:19727120:19729886:-1 gene:Os02g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAR1, Os RAR1 description:Cys- and His-rich domain (CHORD, zinc binding finger motif) containing protein, Innate-immune response (Os02t0535400-01)
Sequence	AGTAGAGACTAGAGAGGCCACAGGCGGCGGCGGCAGCAGCGGAAGTCTCTCGTCTCGTCC GTGGAGAAAGGGGGAAGACGAAGATGTCGACGGAGGCGGAGACCACCAGCGCCGCCGCCC CCGCCCCCGCCCCCGCCCCCGCATCGGCGCCGGCGCGGTGCCAGCGGATAGGCTGCGACG CCACGTTCACCGACGACAACAACCCCGACGGCTCCTGCCAATACCACCCCTCCGTGACCT ATGTTTCATGATGGCATGAAACAGTGGAGTTGCTGTAAGCAAAAAAGCCATGATTTTAGC CTATTTTTGGCTATTCCTGGGTGCAAAACTGGAAAGCACACAACTGAGAAACCAATCACA AAAGCAGTTCCTACTAAACCATCAAAGGCAGTTCCAGTCCAGACTTCGAAGCAGAGTGTG GGAGCTGACACTTGCTCAAGGTGCCGTCAAGGTTTCTTTTGCTCTGACCATGGATCACAA CCCAAGGCACAAATACCAACCGCTACCAGTGATACTAACATGGTACCTGTTGAGAAGCCT GCAGTTCCACCACCAAAGAAAAAAATTGATCTGAATGAGCCTAGGGTTTGTAAGAACAAA GGATGTGGTAAAACCTACAAGGAGAAGGATAATCATGATGAAGCATGCGATTACCATCCA GGACCTGCAGTTTTTCGCGACAGGATTAGAGGGTGGAAATGTTGTGATATTCATGTCAAG GAATTTGATGAATTTATGGAGATCCCTCCGTGCACAAAGGGTTGGCACAATGCTGATGCC GCATGAATTTTCACCATGCCCCATCTTGGAATAAGAACCCTATTAGCATAAGGTTCTCTT GTATCTCGTAGTGCATAAGGTGCAATTTTTATGGAGAATTTTACTTGGAGTTGGGGAGTG TGGCAAAGATACCGAGAATAGGCTGTTTTACCGTGCTCTGTGTGACTGCTGCAAAAGTGT GCGTGGTGTTTCATTTTTTGTCTGAAACGGGGACTTGAAATTGTGTGTGGAGACTTCGGT CTCGTTCGTTGGCTCGTTGCCAATTCTTCATAGTTAGAAAATCAAATGCTCCATCTAAAT GCTATCCTGCAGACTTTTGGTAACACCCATCTTTCTGTTTATATG