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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os02t0535000-02
CDS Infomation

cds chromosome:IRGSP-1.0:2:19715004:19717630:-1 gene:Os02g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chaperone protein dnaJ-related. (Os02t0535000-01);Similar to chaperone protein dnaJ-related. (Os02t0535000-02)
Sequence

ATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGGCACCGGCAGCGCCAGCGGCGAGG
CGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTCCTCCGACTTTATGGGGGAGGGTG
ACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGCGGCGGTGCTCCTCCGCCGGCGAG
CCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTTGCATAATTGAAGGCCCAGAGACT
ATACAAGACTTTGTTCAAATGCAATCACAAGAGATTCAAGACAACATCAGGAGCCGCCGT
AACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGATTGCGGGTGCAGCAGCGAATCAGA
ACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTGAAATGCCTGAAATCCCGTCTAGT
ATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGAAACAACTCTATTTGACATCATTC
TCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGATAGCCCCAGTACTTGAGCTGAAA
TTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAAGGACCATGCACTTGCCTCTTCAA
TTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAGGTGGTGCAGTTGGTGTAATCTCG
GCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGCAAGAGAAGAAAAGGTGTACATAT
TGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTTCTGCAAGTGGAATGCTATTGAAC
AGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATAATATGTGGTCTACAACCGAAAGG
TGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCCCAACTTGCTTGTGCACAGGAACG
GCAATGGCAAGCGAGCATGACCCACGGATAGACCCCTTCGATTAG

Peptide Sequence

PEP ID

Os02t0535000-02
PEP Infomation

pep chromosome:IRGSP-1.0:2:19715004:19717630:-1 gene:Os02g0535000 transcript:Os02t0535000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chaperone protein dnaJ-related. (Os02t0535000-01);Similar to chaperone protein dnaJ-related. (Os02t0535000-02)
Sequence

MYYCLAAPPAAAAPAAPAARRASSFLFVVSVPPPTLWGRVTGGAVSAQRLVRRRCSSAGE
PRAAGDGGLSSFCIIEGPETIQDFVQMQSQEIQDNIRSRRNKIFLLMEEVRRLRVQQRIR
TSESRGASSEESEMPEIPSSIPFLPNTSPKTMKQLYLTSFSFITGIIFFGGLIAPVLELK
LGLGGTSYEDFIRTMHLPLQLSQVDPIVASFSGGAVGVISALMLVEIRNVRQQEKKRCTY
CHGTGYLPCARCSASGMLLNSKSFSLSCDNGHNMWSTTERCPNCSGAGKVMCPTCLCTGT
AMASEHDPRIDPFD

Transcript Sequence

Transcript ID

Os02t0535000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:2:19715004:19717630:-1 gene:Os02g0535000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to chaperone protein dnaJ-related. (Os02t0535000-01);Similar to chaperone protein dnaJ-related. (Os02t0535000-02)
Sequence

AGTCGCTGGCCGGCCGGCCGGCCATGTACTACTGCCTCGCCGCGCCGCCGGCCGCTGCGG
CACCGGCAGCGCCAGCGGCGAGGCGCGCGTCCTCTTTCCTCTTCGTGGTGTCGGTCCCTC
CTCCGACTTTATGGGGGAGGGTGACGGGAGGCGCCGTGTCCGCCCAGCGGCTGGTGCGGC
GGCGGTGCTCCTCCGCCGGCGAGCCCAGGGCGGCCGGCGACGGTGGCCTATCCAGTTTTT
GCATAATTGAAGGCCCAGAGACTATACAAGACTTTGTTCAAATGCAATCACAAGAGATTC
AAGACAACATCAGGAGCCGCCGTAACAAAATTTTCCTTTTGATGGAAGAGGTTAGACGAT
TGCGGGTGCAGCAGCGAATCAGAACTTCTGAAAGCAGAGGTGCAAGCAGTGAAGAAAGTG
AAATGCCTGAAATCCCGTCTAGTATTCCCTTTTTGCCTAATACGTCACCGAAGACAATGA
AACAACTCTATTTGACATCATTCTCATTCATAACTGGGATAATCTTTTTTGGAGGCTTGA
TAGCCCCAGTACTTGAGCTGAAATTAGGGCTAGGTGGTACATCTTATGAAGATTTTATAA
GGACCATGCACTTGCCTCTTCAATTAAGTCAGGTAGATCCCATTGTGGCATCCTTTTCAG
GTGGTGCAGTTGGTGTAATCTCGGCATTAATGTTGGTTGAAATTAGAAACGTCAGGCAGC
AAGAGAAGAAAAGGTGTACATATTGCCATGGGACTGGATACTTGCCATGCGCTCGCTGTT
CTGCAAGTGGAATGCTATTGAACAGCAAGAGTTTTTCACTTTCATGTGACAACGGCCATA
ATATGTGGTCTACAACCGAAAGGTGCCCCAATTGTTCAGGAGCTGGAAAGGTGATGTGCC
CAACTTGCTTGTGCACAGGAACGGCAATGGCAAGCGAGCATGACCCACGGATAGACCCCT
TCGATTAGTGATGAGCAATTGGAATCTGGAAGTGTGTATTCTAGCTGTACTGTTGGCTGC
CCCCCCTTTTTGTTTGTGTTGCTGTGATAGGCCTGAATACCTGAAGAATGAAGTTCAGAT
CACACAACGAAAGCCAAAAGCTGTAACCGTACGATGAATGAACTCTGTGACTAGTATAGA
ACTCTCGTCTGTGGAACTTTTTCCG